RNA–Protein interactions for RNA: ENST00000374446.6

ZNF239-202, Transcript of zinc finger protein 239, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF239, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF239-202ENST00000374446 NISCHQ9Y2I1 1504 aa27.63■■■□□ 2.01
ZNF239-202ENST00000374446 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
ZNF239-202ENST00000374446 ZCCHC6Q5VYS8 1495 aaKnown RBP23.15■■□□□ 1.3
ZNF239-202ENST00000374446 ABCC9O60706 1549 aa23.03■■□□□ 1.28
ZNF239-202ENST00000374446 DCAF8L2P0C7V8 631 aa22.97■■□□□ 1.27
ZNF239-202ENST00000374446 DCAF1Q9Y4B6 1507 aa22.83■■□□□ 1.25
ZNF239-202ENST00000374446 MYO15BQ96JP2 1530 aa22.63■■□□□ 1.21
ZNF239-202ENST00000374446 NACADO15069 1562 aa22.54■■□□□ 1.2
ZNF239-202ENST00000374446 SHROOM4Q9ULL8 1493 aa22.44■■□□□ 1.18
ZNF239-202ENST00000374446 RB1CC1Q8TDY2 1594 aa22.39■■□□□ 1.17
ZNF239-202ENST00000374446 SCRIBQ14160 1630 aa22.16■■□□□ 1.14
ZNF239-202ENST00000374446 UNC13AQ9UPW8 1703 aa21.83■■□□□ 1.08
ZNF239-202ENST00000374446 PABPN1Q86U42 306 aaKnown RBP eCLIP21.73■■□□□ 1.07
ZNF239-202ENST00000374446 BICRAQ9NZM4 1560 aa21.7■■□□□ 1.06
ZNF239-202ENST00000374446 SUPT5HO00267 1087 aaKnown RBP21.54■■□□□ 1.04
ZNF239-202ENST00000374446 CECR2Q9BXF3 1484 aa21.49■■□□□ 1.03
ZNF239-202ENST00000374446 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
ZNF239-202ENST00000374446 MROH2BQ7Z745 1585 aa21.33■■□□□ 1.01
ZNF239-202ENST00000374446 BAZ1AQ9NRL2 1556 aaPredicted RBP21.33■■□□□ 1.01
ZNF239-202ENST00000374446 SMARCA4P51532 1647 aa21.23■□□□□ 0.99
ZNF239-202ENST00000374446 WIZO95785 1651 aa21.11■□□□□ 0.97
ZNF239-202ENST00000374446 EIF4G1Q04637 1599 aaKnown RBP21.07■□□□□ 0.96
ZNF239-202ENST00000374446 PEG3Q9GZU2 1588 aa20.99■□□□□ 0.95
ZNF239-202ENST00000374446 ATAD2BQ9ULI0 1458 aa20.98■□□□□ 0.95
ZNF239-202ENST00000374446 SMARCA2P51531 1590 aa20.94■□□□□ 0.94
ZNF239-202ENST00000374446 TOP2AP11388 1531 aaKnown RBP20.91■□□□□ 0.94
ZNF239-202ENST00000374446 NCAPD3P42695 1498 aa20.85■□□□□ 0.93
ZNF239-202ENST00000374446 BAZ1BQ9UIG0 1483 aaKnown RBP20.85■□□□□ 0.93
ZNF239-202ENST00000374446 CC2D2AQ9P2K1 1620 aa20.8■□□□□ 0.92
ZNF239-202ENST00000374446 HMGXB3Q12766 1538 aa20.75■□□□□ 0.91
ZNF239-202ENST00000374446 CCDC88BA6NC98 1476 aa20.73■□□□□ 0.91
ZNF239-202ENST00000374446 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
ZNF239-202ENST00000374446 DNAJC5BQ9UF47 199 aa20.52■□□□□ 0.88
ZNF239-202ENST00000374446 CFTRP13569 1480 aa20.32■□□□□ 0.84
ZNF239-202ENST00000374446 CADPSQ9ULU8 1353 aa20.32■□□□□ 0.84
ZNF239-202ENST00000374446 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
ZNF239-202ENST00000374446 ABCC8Q09428 1581 aa20.19■□□□□ 0.82
ZNF239-202ENST00000374446 NESP48681 1621 aa20.15■□□□□ 0.82
ZNF239-202ENST00000374446 WRNQ14191 1432 aaPredicted RBP eCLIP20.13■□□□□ 0.81
ZNF239-202ENST00000374446 LAMC3Q9Y6N6 1575 aa20.12■□□□□ 0.81
ZNF239-202ENST00000374446 PRDM2Q13029 1718 aa20.07■□□□□ 0.8
ZNF239-202ENST00000374446 FANCD2Q9BXW9 1451 aa20.06■□□□□ 0.8
ZNF239-202ENST00000374446 PDS5BQ9NTI5 1447 aa20.03■□□□□ 0.8
ZNF239-202ENST00000374446 SYNJ1O43426 1573 aa20■□□□□ 0.79
ZNF239-202ENST00000374446 CUX1P39880 1505 aa19.95■□□□□ 0.78
ZNF239-202ENST00000374446 TOP2BQ02880 1626 aa19.94■□□□□ 0.78
ZNF239-202ENST00000374446 CEP164Q9UPV0 1460 aa19.94■□□□□ 0.78
ZNF239-202ENST00000374446 FAM9AQ8IZU1 332 aaPredicted RBP19.9■□□□□ 0.78
ZNF239-202ENST00000374446 BIVM-ERCC5R4GMW8 1640 aa19.89■□□□□ 0.78
ZNF239-202ENST00000374446 KIF21AQ7Z4S6 1674 aa19.83■□□□□ 0.77
ZNF239-202ENST00000374446 SOGA1O94964 1423 aa19.83■□□□□ 0.77
ZNF239-202ENST00000374446 DNMBPQ6XZF7 1577 aa19.81■□□□□ 0.76
ZNF239-202ENST00000374446 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
ZNF239-202ENST00000374446 URB2Q14146 1524 aaKnown RBP19.8■□□□□ 0.76
ZNF239-202ENST00000374446 ERCC6Q03468 1493 aa19.77■□□□□ 0.76
ZNF239-202ENST00000374446 FGD5Q6ZNL6 1462 aa19.77■□□□□ 0.75
ZNF239-202ENST00000374446 EEA1Q15075 1411 aa19.75■□□□□ 0.75
ZNF239-202ENST00000374446 RUSC2Q8N2Y8 1516 aa19.75■□□□□ 0.75
ZNF239-202ENST00000374446 MRC2Q9UBG0 1479 aa19.75■□□□□ 0.75
ZNF239-202ENST00000374446 LOC105371045A0A1W2PR82 267 aa19.75■□□□□ 0.75
ZNF239-202ENST00000374446 CSRNP3Q8WYN3 585 aa19.71■□□□□ 0.75
ZNF239-202ENST00000374446 POLA1P09884 1462 aaPredicted RBP19.7■□□□□ 0.74
ZNF239-202ENST00000374446 KIF27Q86VH2 1401 aa19.65■□□□□ 0.74
ZNF239-202ENST00000374446 RAD54L2Q9Y4B4 1467 aa19.65■□□□□ 0.74
ZNF239-202ENST00000374446 CUX2O14529 1486 aa19.63■□□□□ 0.73
ZNF239-202ENST00000374446 WDR62O43379 1518 aa19.62■□□□□ 0.73
ZNF239-202ENST00000374446 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
ZNF239-202ENST00000374446 ABCA10Q8WWZ4 1543 aa19.59■□□□□ 0.73
ZNF239-202ENST00000374446 THOC2Q8NI27 1593 aaKnown RBP19.57■□□□□ 0.72
ZNF239-202ENST00000374446 IGF1RP08069 1367 aa19.52■□□□□ 0.72
ZNF239-202ENST00000374446 TDRD9Q8NDG6 1382 aaKnown RBP19.51■□□□□ 0.71
ZNF239-202ENST00000374446 TARBP1Q13395 1621 aaKnown RBP19.5■□□□□ 0.71
ZNF239-202ENST00000374446 IFT140Q96RY7 1462 aa19.49■□□□□ 0.71
ZNF239-202ENST00000374446 WDR97A6NE52 1622 aa19.46■□□□□ 0.71
ZNF239-202ENST00000374446 GOLGA3Q08378 1498 aa19.46■□□□□ 0.71
ZNF239-202ENST00000374446 PRXQ9BXM0 1461 aa19.46■□□□□ 0.71
ZNF239-202ENST00000374446 UBTFP17480 764 aaKnown RBP19.45■□□□□ 0.7
ZNF239-202ENST00000374446 KIF21BO75037 1637 aa19.44■□□□□ 0.7
ZNF239-202ENST00000374446 GAPVD1Q14C86 1478 aa19.44■□□□□ 0.7
ZNF239-202ENST00000374446 RAPGEF2Q9Y4G8 1499 aa19.41■□□□□ 0.7
ZNF239-202ENST00000374446 CARMIL1Q5VZK9 1371 aa19.41■□□□□ 0.7
ZNF239-202ENST00000374446 ABCA5Q8WWZ7 1642 aa19.4■□□□□ 0.7
ZNF239-202ENST00000374446 AQRO60306 1485 aaKnown RBP eCLIP19.4■□□□□ 0.7
ZNF239-202ENST00000374446 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
ZNF239-202ENST00000374446 ZNF608Q9ULD9 1512 aaPredicted RBP19.38■□□□□ 0.69
ZNF239-202ENST00000374446 ERICH3Q5RHP9 1530 aa19.37■□□□□ 0.69
ZNF239-202ENST00000374446 GRIN2BQ13224 1484 aa19.31■□□□□ 0.68
ZNF239-202ENST00000374446 CUL7Q14999 1698 aa19.29■□□□□ 0.68
ZNF239-202ENST00000374446 EIF4G3O43432 1585 aaKnown RBP19.26■□□□□ 0.67
ZNF239-202ENST00000374446 CEP162Q5TB80 1403 aa19.25■□□□□ 0.67
ZNF239-202ENST00000374446 PBRM1Q86U86 1689 aa19.24■□□□□ 0.67
ZNF239-202ENST00000374446 FHAD1B1AJZ9 1412 aa19.23■□□□□ 0.67
ZNF239-202ENST00000374446 SNAPC4Q5SXM2 1469 aa19.19■□□□□ 0.66
ZNF239-202ENST00000374446 RANGAP1P46060 587 aaPredicted RBP19.18■□□□□ 0.66
ZNF239-202ENST00000374446 ADAMTS12P58397 1594 aa19.16■□□□□ 0.66
ZNF239-202ENST00000374446 CLIP1P30622 1438 aa19.16■□□□□ 0.66
ZNF239-202ENST00000374446 MAGI1Q96QZ7 1491 aaPredicted RBP19.15■□□□□ 0.66
ZNF239-202ENST00000374446 CHMP7Q8WUX9 453 aaPredicted RBP19.12■□□□□ 0.65
ZNF239-202ENST00000374446 SYNJ2O15056 1496 aa19.09■□□□□ 0.65
ZNF239-202ENST00000374446 FBLN2P98095 1184 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms