RNA–Protein interactions for RNA: ENST00000374044.1

TNFSF15-201, Transcript of TNF superfamily member 15, humanhuman

BASIC

Gene TNFSF15, Length 2,789 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF15-201ENST00000374044 NISCHQ9Y2I1 1504 aa16.4■□□□□ 0.22
TNFSF15-201ENST00000374044 CCDC180Q9P1Z9 1646 aa15.4■□□□□ 0.06
TNFSF15-201ENST00000374044 CHIC1Q5VXU3 224 aa14.89□□□□□ -0.03
TNFSF15-201ENST00000374044 MYO15BQ96JP2 1530 aa14.55□□□□□ -0.08
TNFSF15-201ENST00000374044 SHROOM4Q9ULL8 1493 aa14.37□□□□□ -0.11
TNFSF15-201ENST00000374044 AEBP2Q6ZN18 517 aaPredicted RBP14.34□□□□□ -0.11
TNFSF15-201ENST00000374044 NACADO15069 1562 aa14.3□□□□□ -0.12
TNFSF15-201ENST00000374044 RB1CC1Q8TDY2 1594 aa14.23□□□□□ -0.13
TNFSF15-201ENST00000374044 DCAF1Q9Y4B6 1507 aa14.22□□□□□ -0.13
TNFSF15-201ENST00000374044 ABCC9O60706 1549 aa14.03□□□□□ -0.16
TNFSF15-201ENST00000374044 UNC13AQ9UPW8 1703 aa13.85□□□□□ -0.19
TNFSF15-201ENST00000374044 ZCCHC6Q5VYS8 1495 aaKnown RBP13.7□□□□□ -0.22
TNFSF15-201ENST00000374044 BICRAQ9NZM4 1560 aa13.66□□□□□ -0.22
TNFSF15-201ENST00000374044 SUPT5HO00267 1087 aaKnown RBP13.56□□□□□ -0.24
TNFSF15-201ENST00000374044 EHMT2Q96KQ7 1210 aa13.51□□□□□ -0.25
TNFSF15-201ENST00000374044 PHF23Q9BUL5 403 aaPredicted RBP13.48□□□□□ -0.25
TNFSF15-201ENST00000374044 SLC24A1O60721 1099 aa13.36□□□□□ -0.27
TNFSF15-201ENST00000374044 EIF4G1Q04637 1599 aaKnown RBP13.24□□□□□ -0.29
TNFSF15-201ENST00000374044 DCAF8L2P0C7V8 631 aa13.22□□□□□ -0.29
TNFSF15-201ENST00000374044 CC2D2AQ9P2K1 1620 aa13.18□□□□□ -0.3
TNFSF15-201ENST00000374044 PEG3Q9GZU2 1588 aa13.17□□□□□ -0.3
TNFSF15-201ENST00000374044 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
TNFSF15-201ENST00000374044 HMGXB3Q12766 1538 aa13.12□□□□□ -0.31
TNFSF15-201ENST00000374044 HRCP23327 699 aa13.09□□□□□ -0.31
TNFSF15-201ENST00000374044 CUX2O14529 1486 aa13.01□□□□□ -0.33
TNFSF15-201ENST00000374044 NCAPD3P42695 1498 aa13□□□□□ -0.33
TNFSF15-201ENST00000374044 PCGF6Q9BYE7 350 aa12.99□□□□□ -0.33
TNFSF15-201ENST00000374044 SCRIBQ14160 1630 aa12.98□□□□□ -0.33
TNFSF15-201ENST00000374044 CECR2Q9BXF3 1484 aa12.97□□□□□ -0.33
TNFSF15-201ENST00000374044 PPARGC1BQ86YN6 1023 aaKnown RBP12.92□□□□□ -0.34
TNFSF15-201ENST00000374044 LOC105371045A0A1W2PR82 267 aa12.9□□□□□ -0.34
TNFSF15-201ENST00000374044 DNAJC5BQ9UF47 199 aa12.9□□□□□ -0.34
TNFSF15-201ENST00000374044 BAZ1AQ9NRL2 1556 aaPredicted RBP12.85□□□□□ -0.35
TNFSF15-201ENST00000374044 SMARCA4P51532 1647 aa12.85□□□□□ -0.35
TNFSF15-201ENST00000374044 PLPPR3Q6T4P5 718 aa12.84□□□□□ -0.35
TNFSF15-201ENST00000374044 LAMC3Q9Y6N6 1575 aa12.84□□□□□ -0.35
TNFSF15-201ENST00000374044 PRDM2Q13029 1718 aa12.8□□□□□ -0.36
TNFSF15-201ENST00000374044 RSF1Q96T23 1441 aaPredicted RBP12.73□□□□□ -0.37
TNFSF15-201ENST00000374044 ATAD2BQ9ULI0 1458 aa12.71□□□□□ -0.38
TNFSF15-201ENST00000374044 TRIM26Q12899 539 aaPredicted RBP12.69□□□□□ -0.38
TNFSF15-201ENST00000374044 THOC2Q8NI27 1593 aaKnown RBP12.68□□□□□ -0.38
TNFSF15-201ENST00000374044 KCNA4P22459 653 aa12.68□□□□□ -0.38
TNFSF15-201ENST00000374044 WDR97A6NE52 1622 aa12.66□□□□□ -0.38
TNFSF15-201ENST00000374044 PABPN1Q86U42 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
TNFSF15-201ENST00000374044 RTN4Q9NQC3 1192 aaKnown RBP12.6□□□□□ -0.39
TNFSF15-201ENST00000374044 TRIM41Q8WV44 630 aa12.6□□□□□ -0.39
TNFSF15-201ENST00000374044 CSRNP3Q8WYN3 585 aa12.58□□□□□ -0.39
TNFSF15-201ENST00000374044 WDR62O43379 1518 aa12.55□□□□□ -0.4
TNFSF15-201ENST00000374044 FAM9AQ8IZU1 332 aaPredicted RBP12.52□□□□□ -0.4
TNFSF15-201ENST00000374044 BAZ1BQ9UIG0 1483 aaKnown RBP12.49□□□□□ -0.41
TNFSF15-201ENST00000374044 MROH2BQ7Z745 1585 aa12.45□□□□□ -0.42
TNFSF15-201ENST00000374044 PDS5BQ9NTI5 1447 aa12.44□□□□□ -0.42
TNFSF15-201ENST00000374044 ZEB1P37275 1124 aaPredicted RBP12.44□□□□□ -0.42
TNFSF15-201ENST00000374044 TOP2AP11388 1531 aaKnown RBP12.43□□□□□ -0.42
TNFSF15-201ENST00000374044 ABCC8Q09428 1581 aa12.4□□□□□ -0.42
TNFSF15-201ENST00000374044 KIF21AQ7Z4S6 1674 aa12.4□□□□□ -0.42
TNFSF15-201ENST00000374044 MRC2Q9UBG0 1479 aa12.39□□□□□ -0.43
TNFSF15-201ENST00000374044 WIZO95785 1651 aa12.37□□□□□ -0.43
TNFSF15-201ENST00000374044 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
TNFSF15-201ENST00000374044 CFTRP13569 1480 aa12.34□□□□□ -0.43
TNFSF15-201ENST00000374044 TTBK1Q5TCY1 1321 aaPredicted RBP12.31□□□□□ -0.44
TNFSF15-201ENST00000374044 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
TNFSF15-201ENST00000374044 ERCC6Q03468 1493 aa12.28□□□□□ -0.44
TNFSF15-201ENST00000374044 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.45
TNFSF15-201ENST00000374044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.18□□□□□ -0.46
TNFSF15-201ENST00000374044 AMER1Q5JTC6 1135 aaPredicted RBP12.17□□□□□ -0.46
TNFSF15-201ENST00000374044 CCDC88BA6NC98 1476 aa12.17□□□□□ -0.46
TNFSF15-201ENST00000374044 ADRA2BP18089 450 aa12.17□□□□□ -0.46
TNFSF15-201ENST00000374044 DNMBPQ6XZF7 1577 aa12.16□□□□□ -0.46
TNFSF15-201ENST00000374044 IFT140Q96RY7 1462 aa12.16□□□□□ -0.46
TNFSF15-201ENST00000374044 SCAF1Q9H7N4 1312 aaKnown RBP12.16□□□□□ -0.46
TNFSF15-201ENST00000374044 CCER1Q8TC90 406 aaPredicted RBP12.12□□□□□ -0.47
TNFSF15-201ENST00000374044 SLC4A1APQ9BWU0 796 aaKnown RBP12.12□□□□□ -0.47
TNFSF15-201ENST00000374044 WRNQ14191 1432 aaPredicted RBP eCLIP12.12□□□□□ -0.47
TNFSF15-201ENST00000374044 SOGA1O94964 1423 aa12.1□□□□□ -0.47
TNFSF15-201ENST00000374044 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
TNFSF15-201ENST00000374044 CEP162Q5TB80 1403 aa12.09□□□□□ -0.47
TNFSF15-201ENST00000374044 TARBP1Q13395 1621 aaKnown RBP12.07□□□□□ -0.48
TNFSF15-201ENST00000374044 TNIKQ9UKE5 1360 aa12.06□□□□□ -0.48
TNFSF15-201ENST00000374044 NESP48681 1621 aa12.05□□□□□ -0.48
TNFSF15-201ENST00000374044 RUSC2Q8N2Y8 1516 aa12.04□□□□□ -0.48
TNFSF15-201ENST00000374044 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
TNFSF15-201ENST00000374044 EEA1Q15075 1411 aa12□□□□□ -0.49
TNFSF15-201ENST00000374044 PELP1Q8IZL8 1130 aaKnown RBP11.99□□□□□ -0.49
TNFSF15-201ENST00000374044 ACIN1Q9UKV3 1341 aaKnown RBP11.98□□□□□ -0.49
TNFSF15-201ENST00000374044 UBTFP17480 764 aaKnown RBP11.98□□□□□ -0.49
TNFSF15-201ENST00000374044 DIEXFQ68CQ4 756 aaKnown RBP11.98□□□□□ -0.49
TNFSF15-201ENST00000374044 NEUROD1Q13562 356 aa11.97□□□□□ -0.49
TNFSF15-201ENST00000374044 TOPBP1Q92547 1522 aa11.96□□□□□ -0.5
TNFSF15-201ENST00000374044 CLASP1Q7Z460 1538 aa11.95□□□□□ -0.5
TNFSF15-201ENST00000374044 BIVM-ERCC5R4GMW8 1640 aa11.95□□□□□ -0.5
TNFSF15-201ENST00000374044 EIF4G3O43432 1585 aaKnown RBP11.94□□□□□ -0.5
TNFSF15-201ENST00000374044 GOLGA3Q08378 1498 aa11.94□□□□□ -0.5
TNFSF15-201ENST00000374044 MAGI1Q96QZ7 1491 aaPredicted RBP11.94□□□□□ -0.5
TNFSF15-201ENST00000374044 ABCA5Q8WWZ7 1642 aa11.9□□□□□ -0.5
TNFSF15-201ENST00000374044 SHROOM2Q13796 1616 aa11.89□□□□□ -0.51
TNFSF15-201ENST00000374044 PRKCSHP14314 528 aaPredicted RBP11.88□□□□□ -0.51
TNFSF15-201ENST00000374044 PBRM1Q86U86 1689 aa11.88□□□□□ -0.51
TNFSF15-201ENST00000374044 YTHDC1Q96MU7 727 aaKnown RBP11.88□□□□□ -0.51
TNFSF15-201ENST00000374044 SYNJ1O43426 1573 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms