RNA–Protein interactions for RNA: ENST00000373836.4

PHACTR4-201, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PHACTR4, Length 3,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-201ENST00000373836 NISCHQ9Y2I1 1504 aa12.89□□□□□ -0.35
PHACTR4-201ENST00000373836 CCDC180Q9P1Z9 1646 aa11.39□□□□□ -0.59
PHACTR4-201ENST00000373836 ABCC9O60706 1549 aa11.25□□□□□ -0.61
PHACTR4-201ENST00000373836 DCAF8L2P0C7V8 631 aa11.01□□□□□ -0.65
PHACTR4-201ENST00000373836 RB1CC1Q8TDY2 1594 aa10.79□□□□□ -0.68
PHACTR4-201ENST00000373836 NACADO15069 1562 aa10.77□□□□□ -0.69
PHACTR4-201ENST00000373836 ZCCHC6Q5VYS8 1495 aaKnown RBP10.71□□□□□ -0.69
PHACTR4-201ENST00000373836 MYO15BQ96JP2 1530 aa10.67□□□□□ -0.7
PHACTR4-201ENST00000373836 DCAF1Q9Y4B6 1507 aa10.63□□□□□ -0.71
PHACTR4-201ENST00000373836 CHIC1Q5VXU3 224 aa10.6□□□□□ -0.71
PHACTR4-201ENST00000373836 PABPN1Q86U42 306 aaKnown RBP eCLIP10.57□□□□□ -0.72
PHACTR4-201ENST00000373836 AEBP2Q6ZN18 517 aaPredicted RBP10.56□□□□□ -0.72
PHACTR4-201ENST00000373836 SCRIBQ14160 1630 aa10.45□□□□□ -0.74
PHACTR4-201ENST00000373836 UNC13AQ9UPW8 1703 aa10.39□□□□□ -0.75
PHACTR4-201ENST00000373836 BICRAQ9NZM4 1560 aa10.36□□□□□ -0.75
PHACTR4-201ENST00000373836 SHROOM4Q9ULL8 1493 aa10.32□□□□□ -0.76
PHACTR4-201ENST00000373836 DNAJC5BQ9UF47 199 aa10.27□□□□□ -0.77
PHACTR4-201ENST00000373836 EIF4G1Q04637 1599 aaKnown RBP10.15□□□□□ -0.78
PHACTR4-201ENST00000373836 CECR2Q9BXF3 1484 aa10.1□□□□□ -0.79
PHACTR4-201ENST00000373836 CC2D2AQ9P2K1 1620 aa10.1□□□□□ -0.79
PHACTR4-201ENST00000373836 BAZ1AQ9NRL2 1556 aaPredicted RBP10.01□□□□□ -0.81
PHACTR4-201ENST00000373836 SMARCA4P51532 1647 aa9.97□□□□□ -0.81
PHACTR4-201ENST00000373836 SMARCA2P51531 1590 aa9.96□□□□□ -0.82
PHACTR4-201ENST00000373836 ATAD2BQ9ULI0 1458 aa9.95□□□□□ -0.82
PHACTR4-201ENST00000373836 NCAPD3P42695 1498 aa9.95□□□□□ -0.82
PHACTR4-201ENST00000373836 MROH2BQ7Z745 1585 aa9.92□□□□□ -0.82
PHACTR4-201ENST00000373836 BAZ1BQ9UIG0 1483 aaKnown RBP9.92□□□□□ -0.82
PHACTR4-201ENST00000373836 HMGXB3Q12766 1538 aa9.86□□□□□ -0.83
PHACTR4-201ENST00000373836 RSF1Q96T23 1441 aaPredicted RBP9.85□□□□□ -0.83
PHACTR4-201ENST00000373836 PEG3Q9GZU2 1588 aa9.84□□□□□ -0.83
PHACTR4-201ENST00000373836 WIZO95785 1651 aa9.79□□□□□ -0.84
PHACTR4-201ENST00000373836 SUPT5HO00267 1087 aaKnown RBP9.78□□□□□ -0.84
PHACTR4-201ENST00000373836 ERCC6Q03468 1493 aa9.75□□□□□ -0.85
PHACTR4-201ENST00000373836 TOP2AP11388 1531 aaKnown RBP9.71□□□□□ -0.85
PHACTR4-201ENST00000373836 CADPSQ9ULU8 1353 aa9.7□□□□□ -0.86
PHACTR4-201ENST00000373836 PDS5BQ9NTI5 1447 aa9.7□□□□□ -0.86
PHACTR4-201ENST00000373836 NESP48681 1621 aa9.68□□□□□ -0.86
PHACTR4-201ENST00000373836 PHF23Q9BUL5 403 aaPredicted RBP9.67□□□□□ -0.86
PHACTR4-201ENST00000373836 LAMC3Q9Y6N6 1575 aa9.67□□□□□ -0.86
PHACTR4-201ENST00000373836 CCDC88BA6NC98 1476 aa9.63□□□□□ -0.87
PHACTR4-201ENST00000373836 CFTRP13569 1480 aa9.6□□□□□ -0.87
PHACTR4-201ENST00000373836 FANCD2Q9BXW9 1451 aa9.58□□□□□ -0.88
PHACTR4-201ENST00000373836 CEP164Q9UPV0 1460 aa9.57□□□□□ -0.88
PHACTR4-201ENST00000373836 CUX2O14529 1486 aa9.56□□□□□ -0.88
PHACTR4-201ENST00000373836 MRC2Q9UBG0 1479 aa9.53□□□□□ -0.88
PHACTR4-201ENST00000373836 KIF21AQ7Z4S6 1674 aa9.51□□□□□ -0.89
PHACTR4-201ENST00000373836 THOC2Q8NI27 1593 aaKnown RBP9.46□□□□□ -0.89
PHACTR4-201ENST00000373836 ABCC8Q09428 1581 aa9.46□□□□□ -0.9
PHACTR4-201ENST00000373836 WDR62O43379 1518 aa9.44□□□□□ -0.9
PHACTR4-201ENST00000373836 URB2Q14146 1524 aaKnown RBP9.42□□□□□ -0.9
PHACTR4-201ENST00000373836 PRDM2Q13029 1718 aa9.42□□□□□ -0.9
PHACTR4-201ENST00000373836 TOPBP1Q92547 1522 aa9.39□□□□□ -0.91
PHACTR4-201ENST00000373836 DNMBPQ6XZF7 1577 aa9.37□□□□□ -0.91
PHACTR4-201ENST00000373836 IFT140Q96RY7 1462 aa9.36□□□□□ -0.91
PHACTR4-201ENST00000373836 EHMT2Q96KQ7 1210 aa9.36□□□□□ -0.91
PHACTR4-201ENST00000373836 SOGA1O94964 1423 aa9.35□□□□□ -0.91
PHACTR4-201ENST00000373836 WRNQ14191 1432 aaPredicted RBP eCLIP9.33□□□□□ -0.92
PHACTR4-201ENST00000373836 POLA1P09884 1462 aaPredicted RBP9.31□□□□□ -0.92
PHACTR4-201ENST00000373836 FGD5Q6ZNL6 1462 aa9.31□□□□□ -0.92
PHACTR4-201ENST00000373836 FBLN2P98095 1184 aa9.31□□□□□ -0.92
PHACTR4-201ENST00000373836 DNAJC5Q9H3Z4 198 aa9.3□□□□□ -0.92
PHACTR4-201ENST00000373836 CUX1P39880 1505 aa9.3□□□□□ -0.92
PHACTR4-201ENST00000373836 TDRD9Q8NDG6 1382 aaKnown RBP9.3□□□□□ -0.92
PHACTR4-201ENST00000373836 OSCARQ8IYS5 282 aa9.29□□□□□ -0.92
PHACTR4-201ENST00000373836 RAD54L2Q9Y4B4 1467 aa9.29□□□□□ -0.92
PHACTR4-201ENST00000373836 ZNF608Q9ULD9 1512 aaPredicted RBP9.28□□□□□ -0.92
PHACTR4-201ENST00000373836 AQRO60306 1485 aaKnown RBP eCLIP9.27□□□□□ -0.933e-6■■■■□ 24.1
PHACTR4-201ENST00000373836 CHMP7Q8WUX9 453 aaPredicted RBP9.26□□□□□ -0.93
PHACTR4-201ENST00000373836 TRIM41Q8WV44 630 aa9.25□□□□□ -0.93
PHACTR4-201ENST00000373836 TOP2BQ02880 1626 aa9.23□□□□□ -0.93
PHACTR4-201ENST00000373836 TARBP1Q13395 1621 aaKnown RBP9.22□□□□□ -0.93
PHACTR4-201ENST00000373836 GAPVD1Q14C86 1478 aa9.22□□□□□ -0.93
PHACTR4-201ENST00000373836 GRIN2BQ13224 1484 aa9.21□□□□□ -0.93
PHACTR4-201ENST00000373836 SYNJ1O43426 1573 aa9.21□□□□□ -0.94
PHACTR4-201ENST00000373836 EIF4G3O43432 1585 aaKnown RBP9.21□□□□□ -0.94
PHACTR4-201ENST00000373836 ABCA10Q8WWZ4 1543 aa9.2□□□□□ -0.94
PHACTR4-201ENST00000373836 BIVM-ERCC5R4GMW8 1640 aa9.19□□□□□ -0.94
PHACTR4-201ENST00000373836 WDR97A6NE52 1622 aa9.18□□□□□ -0.94
PHACTR4-201ENST00000373836 KIF27Q86VH2 1401 aa9.17□□□□□ -0.94
PHACTR4-201ENST00000373836 SNAPC4Q5SXM2 1469 aa9.17□□□□□ -0.94
PHACTR4-201ENST00000373836 MAGI1Q96QZ7 1491 aaPredicted RBP9.17□□□□□ -0.94
PHACTR4-201ENST00000373836 SYNJ2O15056 1496 aa9.13□□□□□ -0.95
PHACTR4-201ENST00000373836 FHAD1B1AJZ9 1412 aa9.12□□□□□ -0.95
PHACTR4-201ENST00000373836 ABCA5Q8WWZ7 1642 aa9.1□□□□□ -0.95
PHACTR4-201ENST00000373836 ERICH3Q5RHP9 1530 aa9.1□□□□□ -0.95
PHACTR4-201ENST00000373836 PBRM1Q86U86 1689 aa9.08□□□□□ -0.96
PHACTR4-201ENST00000373836 IGF1RP08069 1367 aa9.08□□□□□ -0.96
PHACTR4-201ENST00000373836 CARMIL1Q5VZK9 1371 aa9.08□□□□□ -0.96
PHACTR4-201ENST00000373836 CHD1O14646 1710 aa9.07□□□□□ -0.96
PHACTR4-201ENST00000373836 GRIN2AQ12879 1464 aa9.06□□□□□ -0.96
PHACTR4-201ENST00000373836 FAM9AQ8IZU1 332 aaPredicted RBP9.06□□□□□ -0.96
PHACTR4-201ENST00000373836 CYB5RLQ6IPT4 315 aa9.06□□□□□ -0.96
PHACTR4-201ENST00000373836 ADAMTS12P58397 1594 aa9.04□□□□□ -0.96
PHACTR4-201ENST00000373836 CSRNP3Q8WYN3 585 aa9.04□□□□□ -0.96
PHACTR4-201ENST00000373836 JPH4Q96JJ6 628 aa9.03□□□□□ -0.96
PHACTR4-201ENST00000373836 CUL7Q14999 1698 aa9.01□□□□□ -0.97
PHACTR4-201ENST00000373836 ARHGEF11O15085 1522 aa9.01□□□□□ -0.97
PHACTR4-201ENST00000373836 NUP160Q12769 1436 aa9□□□□□ -0.97
PHACTR4-201ENST00000373836 EEA1Q15075 1411 aa9□□□□□ -0.97
PHACTR4-201ENST00000373836 RUSC2Q8N2Y8 1516 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms