RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 NISCHQ9Y2I1 1504 aa43.94■■■■■ 4.63
PBX3-202ENST00000373482 CCDC180Q9P1Z9 1646 aa39.1■■■■□ 3.85
PBX3-202ENST00000373482 ABCC9O60706 1549 aa37.8■■■■□ 3.64
PBX3-202ENST00000373482 ZCCHC6Q5VYS8 1495 aaKnown RBP36.67■■■■□ 3.46
PBX3-202ENST00000373482 NACADO15069 1562 aa36.6■■■■□ 3.45
PBX3-202ENST00000373482 RB1CC1Q8TDY2 1594 aa36.6■■■■□ 3.45
PBX3-202ENST00000373482 DCAF8L2P0C7V8 631 aa36.57■■■■□ 3.44
PBX3-202ENST00000373482 MYO15BQ96JP2 1530 aa36.44■■■■□ 3.42
PBX3-202ENST00000373482 DCAF1Q9Y4B6 1507 aa36.39■■■■□ 3.42
PBX3-202ENST00000373482 UNC13AQ9UPW8 1703 aa35.92■■■■□ 3.34
PBX3-202ENST00000373482 SCRIBQ14160 1630 aa35.62■■■■□ 3.29
PBX3-202ENST00000373482 BICRAQ9NZM4 1560 aa35.41■■■■□ 3.26
PBX3-202ENST00000373482 PABPN1Q86U42 306 aaKnown RBP eCLIP35.3■■■■□ 3.24
PBX3-202ENST00000373482 SHROOM4Q9ULL8 1493 aa35.09■■■■□ 3.21
PBX3-202ENST00000373482 EIF4G1Q04637 1599 aaKnown RBP34.47■■■■□ 3.11
PBX3-202ENST00000373482 DNAJC5BQ9UF47 199 aa34.29■■■■□ 3.08
PBX3-202ENST00000373482 CC2D2AQ9P2K1 1620 aa34.29■■■■□ 3.08
PBX3-202ENST00000373482 CECR2Q9BXF3 1484 aa34.14■■■■□ 3.06
PBX3-202ENST00000373482 SMARCA4P51532 1647 aa34.1■■■■□ 3.05
PBX3-202ENST00000373482 BAZ1AQ9NRL2 1556 aaPredicted RBP34.1■■■■□ 3.05
PBX3-202ENST00000373482 MROH2BQ7Z745 1585 aa33.85■■■■□ 3.01
PBX3-202ENST00000373482 SMARCA2P51531 1590 aa33.81■■■■□ 3
PBX3-202ENST00000373482 ATAD2BQ9ULI0 1458 aa33.75■■■□□ 2.99
PBX3-202ENST00000373482 PEG3Q9GZU2 1588 aa33.74■■■□□ 2.99
PBX3-202ENST00000373482 NCAPD3P42695 1498 aa33.68■■■□□ 2.98
PBX3-202ENST00000373482 HMGXB3Q12766 1538 aa33.62■■■□□ 2.97
PBX3-202ENST00000373482 WIZO95785 1651 aa33.61■■■□□ 2.97
PBX3-202ENST00000373482 BAZ1BQ9UIG0 1483 aaKnown RBP33.54■■■□□ 2.96
PBX3-202ENST00000373482 RSF1Q96T23 1441 aaPredicted RBP33.53■■■□□ 2.96
PBX3-202ENST00000373482 TOP2AP11388 1531 aaKnown RBP33.23■■■□□ 2.91
PBX3-202ENST00000373482 SUPT5HO00267 1087 aaKnown RBP32.94■■■□□ 2.86
PBX3-202ENST00000373482 LAMC3Q9Y6N6 1575 aa32.86■■■□□ 2.85
PBX3-202ENST00000373482 NESP48681 1621 aa32.79■■■□□ 2.84
PBX3-202ENST00000373482 CCDC88BA6NC98 1476 aa32.78■■■□□ 2.84
PBX3-202ENST00000373482 CADPSQ9ULU8 1353 aa32.7■■■□□ 2.83
PBX3-202ENST00000373482 PRDM2Q13029 1718 aa32.68■■■□□ 2.82
PBX3-202ENST00000373482 ERCC6Q03468 1493 aa32.61■■■□□ 2.81
PBX3-202ENST00000373482 CFTRP13569 1480 aa32.59■■■□□ 2.81
PBX3-202ENST00000373482 KIF21AQ7Z4S6 1674 aa32.59■■■□□ 2.81
PBX3-202ENST00000373482 PDS5BQ9NTI5 1447 aa32.55■■■□□ 2.8
PBX3-202ENST00000373482 FANCD2Q9BXW9 1451 aa32.37■■■□□ 2.77
PBX3-202ENST00000373482 CEP164Q9UPV0 1460 aa32.33■■■□□ 2.77
PBX3-202ENST00000373482 THOC2Q8NI27 1593 aaKnown RBP32.32■■■□□ 2.76
PBX3-202ENST00000373482 MRC2Q9UBG0 1479 aa32.2■■■□□ 2.75
PBX3-202ENST00000373482 CUX2O14529 1486 aa32.14■■■□□ 2.74
PBX3-202ENST00000373482 WDR62O43379 1518 aa32.1■■■□□ 2.73
PBX3-202ENST00000373482 URB2Q14146 1524 aaKnown RBP32.01■■■□□ 2.72
PBX3-202ENST00000373482 ABCC8Q09428 1581 aa31.96■■■□□ 2.71
PBX3-202ENST00000373482 DNMBPQ6XZF7 1577 aa31.94■■■□□ 2.7
PBX3-202ENST00000373482 TOPBP1Q92547 1522 aa31.9■■■□□ 2.7
PBX3-202ENST00000373482 CUX1P39880 1505 aa31.75■■■□□ 2.67
PBX3-202ENST00000373482 BIVM-ERCC5R4GMW8 1640 aa31.67■■■□□ 2.66
PBX3-202ENST00000373482 WRNQ14191 1432 aaPredicted RBP eCLIP31.66■■■□□ 2.66
PBX3-202ENST00000373482 POLA1P09884 1462 aaPredicted RBP31.63■■■□□ 2.65
PBX3-202ENST00000373482 TOP2BQ02880 1626 aa31.63■■■□□ 2.65
PBX3-202ENST00000373482 IFT140Q96RY7 1462 aa31.62■■■□□ 2.65
PBX3-202ENST00000373482 FGD5Q6ZNL6 1462 aa31.61■■■□□ 2.65
PBX3-202ENST00000373482 SYNJ1O43426 1573 aa31.6■■■□□ 2.65
PBX3-202ENST00000373482 TARBP1Q13395 1621 aaKnown RBP31.57■■■□□ 2.64
PBX3-202ENST00000373482 SOGA1O94964 1423 aa31.49■■■□□ 2.63
PBX3-202ENST00000373482 RAD54L2Q9Y4B4 1467 aa31.46■■■□□ 2.63
PBX3-202ENST00000373482 WDR97A6NE52 1622 aa31.46■■■□□ 2.63
PBX3-202ENST00000373482 EIF4G3O43432 1585 aaKnown RBP31.41■■■□□ 2.62
PBX3-202ENST00000373482 ZNF608Q9ULD9 1512 aaPredicted RBP31.4■■■□□ 2.62
PBX3-202ENST00000373482 ABCA10Q8WWZ4 1543 aa31.32■■■□□ 2.6
PBX3-202ENST00000373482 AQRO60306 1485 aaKnown RBP eCLIP31.27■■■□□ 2.6
PBX3-202ENST00000373482 PBRM1Q86U86 1689 aa31.25■■■□□ 2.59
PBX3-202ENST00000373482 TDRD9Q8NDG6 1382 aaKnown RBP31.25■■■□□ 2.59
PBX3-202ENST00000373482 ABCA5Q8WWZ7 1642 aa31.23■■■□□ 2.59
PBX3-202ENST00000373482 GAPVD1Q14C86 1478 aa31.16■■■□□ 2.58
PBX3-202ENST00000373482 GRIN2BQ13224 1484 aa31.12■■■□□ 2.57
PBX3-202ENST00000373482 TRIM41Q8WV44 630 aa31.11■■■□□ 2.57
PBX3-202ENST00000373482 CHD1O14646 1710 aa31.06■■■□□ 2.56
PBX3-202ENST00000373482 SNAPC4Q5SXM2 1469 aa31.02■■■□□ 2.56
PBX3-202ENST00000373482 MAGI1Q96QZ7 1491 aaPredicted RBP31.02■■■□□ 2.56
PBX3-202ENST00000373482 ERICH3Q5RHP9 1530 aa30.99■■■□□ 2.55
PBX3-202ENST00000373482 KIF27Q86VH2 1401 aa30.98■■■□□ 2.55
PBX3-202ENST00000373482 ADAMTS12P58397 1594 aa30.9■■■□□ 2.54
PBX3-202ENST00000373482 SYNJ2O15056 1496 aa30.88■■■□□ 2.53
PBX3-202ENST00000373482 CHIC1Q5VXU3 224 aa30.87■■■□□ 2.53
PBX3-202ENST00000373482 FBLN2P98095 1184 aa30.86■■■□□ 2.53
PBX3-202ENST00000373482 CUL7Q14999 1698 aa30.85■■■□□ 2.53
PBX3-202ENST00000373482 OSCARQ8IYS5 282 aa30.82■■■□□ 2.52
PBX3-202ENST00000373482 CHMP7Q8WUX9 453 aaPredicted RBP30.82■■■□□ 2.52
PBX3-202ENST00000373482 FHAD1B1AJZ9 1412 aa30.8■■■□□ 2.52
PBX3-202ENST00000373482 RUSC2Q8N2Y8 1516 aa30.75■■■□□ 2.51
PBX3-202ENST00000373482 IGF1RP08069 1367 aa30.75■■■□□ 2.51
PBX3-202ENST00000373482 GRIN2AQ12879 1464 aa30.72■■■□□ 2.51
PBX3-202ENST00000373482 DNAJC5Q9H3Z4 198 aa30.71■■■□□ 2.51
PBX3-202ENST00000373482 CARMIL1Q5VZK9 1371 aa30.62■■■□□ 2.49
PBX3-202ENST00000373482 EEA1Q15075 1411 aa30.62■■■□□ 2.49
PBX3-202ENST00000373482 CEP170Q5SW79 1584 aa30.58■■■□□ 2.49
PBX3-202ENST00000373482 CLASP1Q7Z460 1538 aa30.57■■■□□ 2.49
PBX3-202ENST00000373482 NUP160Q12769 1436 aa30.53■■■□□ 2.48
PBX3-202ENST00000373482 RAPGEF2Q9Y4G8 1499 aa30.51■■■□□ 2.48
PBX3-202ENST00000373482 CSRNP3Q8WYN3 585 aa30.47■■■□□ 2.47
PBX3-202ENST00000373482 FAM9AQ8IZU1 332 aaPredicted RBP30.43■■■□□ 2.46
PBX3-202ENST00000373482 PRXQ9BXM0 1461 aa30.43■■■□□ 2.46
PBX3-202ENST00000373482 CTTNBP2Q8WZ74 1663 aa30.41■■■□□ 2.46
PBX3-202ENST00000373482 RIMBP3CA6NJZ7 1639 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms