RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 NISCHQ9Y2I1 1504 aa25.55■■□□□ 1.68
LCN1-202ENST00000371781 CCDC180Q9P1Z9 1646 aa22.43■■□□□ 1.18
LCN1-202ENST00000371781 ABCC9O60706 1549 aa21.91■■□□□ 1.1
LCN1-202ENST00000371781 ZCCHC6Q5VYS8 1495 aaKnown RBP21.47■■□□□ 1.03
LCN1-202ENST00000371781 DCAF1Q9Y4B6 1507 aa21.14■□□□□ 0.97
LCN1-202ENST00000371781 MYO15BQ96JP2 1530 aa20.95■□□□□ 0.94
LCN1-202ENST00000371781 DCAF8L2P0C7V8 631 aa20.88■□□□□ 0.93
LCN1-202ENST00000371781 NACADO15069 1562 aa20.87■□□□□ 0.93
LCN1-202ENST00000371781 RB1CC1Q8TDY2 1594 aa20.76■□□□□ 0.91
LCN1-202ENST00000371781 DNAJC5BQ9UF47 199 aa20.72■□□□□ 0.91
LCN1-202ENST00000371781 SHROOM4Q9ULL8 1493 aa20.6■□□□□ 0.89
LCN1-202ENST00000371781 SCRIBQ14160 1630 aa20.58■□□□□ 0.89
LCN1-202ENST00000371781 UNC13AQ9UPW8 1703 aa20.46■□□□□ 0.87
LCN1-202ENST00000371781 PABPN1Q86U42 306 aaKnown RBP eCLIP20.33■□□□□ 0.85
LCN1-202ENST00000371781 BICRAQ9NZM4 1560 aa20.25■□□□□ 0.83
LCN1-202ENST00000371781 CECR2Q9BXF3 1484 aa19.91■□□□□ 0.78
LCN1-202ENST00000371781 CC2D2AQ9P2K1 1620 aa19.82■□□□□ 0.76
LCN1-202ENST00000371781 MROH2BQ7Z745 1585 aa19.77■□□□□ 0.76
LCN1-202ENST00000371781 SMARCA4P51532 1647 aa19.73■□□□□ 0.75
LCN1-202ENST00000371781 RSF1Q96T23 1441 aaPredicted RBP19.72■□□□□ 0.75
LCN1-202ENST00000371781 BAZ1AQ9NRL2 1556 aaPredicted RBP19.71■□□□□ 0.75
LCN1-202ENST00000371781 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
LCN1-202ENST00000371781 WIZO95785 1651 aa19.59■□□□□ 0.73
LCN1-202ENST00000371781 SUPT5HO00267 1087 aaKnown RBP19.59■□□□□ 0.73
LCN1-202ENST00000371781 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
LCN1-202ENST00000371781 ATAD2BQ9ULI0 1458 aa19.42■□□□□ 0.7
LCN1-202ENST00000371781 TOP2AP11388 1531 aaKnown RBP19.37■□□□□ 0.69
LCN1-202ENST00000371781 SMARCA2P51531 1590 aa19.35■□□□□ 0.69
LCN1-202ENST00000371781 HMGXB3Q12766 1538 aa19.26■□□□□ 0.67
LCN1-202ENST00000371781 NCAPD3P42695 1498 aa19.26■□□□□ 0.67
LCN1-202ENST00000371781 BAZ1BQ9UIG0 1483 aaKnown RBP19.24■□□□□ 0.67
LCN1-202ENST00000371781 DNAJC5Q9H3Z4 198 aa19.13■□□□□ 0.65
LCN1-202ENST00000371781 CCDC88BA6NC98 1476 aa19.13■□□□□ 0.65
LCN1-202ENST00000371781 CUX2O14529 1486 aa18.94■□□□□ 0.62
LCN1-202ENST00000371781 ERCC6Q03468 1493 aa18.9■□□□□ 0.62
LCN1-202ENST00000371781 NESP48681 1621 aa18.78■□□□□ 0.6
LCN1-202ENST00000371781 CFTRP13569 1480 aa18.78■□□□□ 0.6
LCN1-202ENST00000371781 PRDM2Q13029 1718 aa18.75■□□□□ 0.59
LCN1-202ENST00000371781 CHIC1Q5VXU3 224 aa18.72■□□□□ 0.59
LCN1-202ENST00000371781 CADPSQ9ULU8 1353 aa18.71■□□□□ 0.59
LCN1-202ENST00000371781 ABCC8Q09428 1581 aa18.7■□□□□ 0.58
LCN1-202ENST00000371781 THOC2Q8NI27 1593 aaKnown RBP18.68■□□□□ 0.58
LCN1-202ENST00000371781 LAMC3Q9Y6N6 1575 aa18.65■□□□□ 0.58
LCN1-202ENST00000371781 KIF21AQ7Z4S6 1674 aa18.61■□□□□ 0.57
LCN1-202ENST00000371781 SYNJ1O43426 1573 aa18.58■□□□□ 0.56
LCN1-202ENST00000371781 FANCD2Q9BXW9 1451 aa18.54■□□□□ 0.56
LCN1-202ENST00000371781 WRNQ14191 1432 aaPredicted RBP eCLIP18.52■□□□□ 0.56
LCN1-202ENST00000371781 CUX1P39880 1505 aa18.5■□□□□ 0.55
LCN1-202ENST00000371781 BIVM-ERCC5R4GMW8 1640 aa18.49■□□□□ 0.55
LCN1-202ENST00000371781 TOP2BQ02880 1626 aa18.47■□□□□ 0.55
LCN1-202ENST00000371781 CEP164Q9UPV0 1460 aa18.43■□□□□ 0.54
LCN1-202ENST00000371781 PDS5BQ9NTI5 1447 aa18.42■□□□□ 0.54
LCN1-202ENST00000371781 TRIM41Q8WV44 630 aa18.4■□□□□ 0.54
LCN1-202ENST00000371781 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.54
LCN1-202ENST00000371781 DNMBPQ6XZF7 1577 aa18.38■□□□□ 0.53
LCN1-202ENST00000371781 TOPBP1Q92547 1522 aa18.35■□□□□ 0.53
LCN1-202ENST00000371781 MRC2Q9UBG0 1479 aa18.33■□□□□ 0.53
LCN1-202ENST00000371781 WDR62O43379 1518 aa18.33■□□□□ 0.52
LCN1-202ENST00000371781 FGD5Q6ZNL6 1462 aa18.29■□□□□ 0.52
LCN1-202ENST00000371781 SOGA1O94964 1423 aa18.25■□□□□ 0.51
LCN1-202ENST00000371781 RUSC2Q8N2Y8 1516 aa18.25■□□□□ 0.51
LCN1-202ENST00000371781 POLA1P09884 1462 aaPredicted RBP18.25■□□□□ 0.51
LCN1-202ENST00000371781 WDR97A6NE52 1622 aa18.21■□□□□ 0.51
LCN1-202ENST00000371781 RAD54L2Q9Y4B4 1467 aa18.18■□□□□ 0.5
LCN1-202ENST00000371781 TARBP1Q13395 1621 aaKnown RBP18.15■□□□□ 0.5
LCN1-202ENST00000371781 ABCA10Q8WWZ4 1543 aa18.12■□□□□ 0.49
LCN1-202ENST00000371781 FAM9AQ8IZU1 332 aaPredicted RBP18.1■□□□□ 0.49
LCN1-202ENST00000371781 EEA1Q15075 1411 aa18.08■□□□□ 0.49
LCN1-202ENST00000371781 ABCA5Q8WWZ7 1642 aa18.07■□□□□ 0.48
LCN1-202ENST00000371781 KIF27Q86VH2 1401 aa18.02■□□□□ 0.48
LCN1-202ENST00000371781 IFT140Q96RY7 1462 aa18■□□□□ 0.47
LCN1-202ENST00000371781 KIF21BO75037 1637 aa17.99■□□□□ 0.47
LCN1-202ENST00000371781 ZNF608Q9ULD9 1512 aaPredicted RBP17.98■□□□□ 0.47
LCN1-202ENST00000371781 OSCARQ8IYS5 282 aa17.97■□□□□ 0.47
LCN1-202ENST00000371781 LOC105371045A0A1W2PR82 267 aa17.96■□□□□ 0.47
LCN1-202ENST00000371781 PRXQ9BXM0 1461 aa17.95■□□□□ 0.46
LCN1-202ENST00000371781 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
LCN1-202ENST00000371781 EIF4G3O43432 1585 aaKnown RBP17.95■□□□□ 0.46
LCN1-202ENST00000371781 TDRD9Q8NDG6 1382 aaKnown RBP17.94■□□□□ 0.46
LCN1-202ENST00000371781 PBRM1Q86U86 1689 aa17.94■□□□□ 0.46
LCN1-202ENST00000371781 IGF1RP08069 1367 aa17.92■□□□□ 0.46
LCN1-202ENST00000371781 RIMBP3CA6NJZ7 1639 aa17.91■□□□□ 0.46
LCN1-202ENST00000371781 RIMBP3BA6NNM3 1639 aa17.91■□□□□ 0.46
LCN1-202ENST00000371781 RIMBP3Q9UFD9 1639 aa17.91■□□□□ 0.46
LCN1-202ENST00000371781 GAPVD1Q14C86 1478 aa17.91■□□□□ 0.46
LCN1-202ENST00000371781 AQRO60306 1485 aaKnown RBP eCLIP17.9■□□□□ 0.46
LCN1-202ENST00000371781 RAPGEF2Q9Y4G8 1499 aa17.9■□□□□ 0.46
LCN1-202ENST00000371781 ERICH3Q5RHP9 1530 aa17.88■□□□□ 0.45
LCN1-202ENST00000371781 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
LCN1-202ENST00000371781 CUL7Q14999 1698 aa17.87■□□□□ 0.45
LCN1-202ENST00000371781 ADAMTS12P58397 1594 aa17.85■□□□□ 0.45
LCN1-202ENST00000371781 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
LCN1-202ENST00000371781 GRIN2BQ13224 1484 aa17.82■□□□□ 0.44
LCN1-202ENST00000371781 CARMIL1Q5VZK9 1371 aa17.79■□□□□ 0.44
LCN1-202ENST00000371781 ARHGEF11O15085 1522 aa17.78■□□□□ 0.44
LCN1-202ENST00000371781 SNAPC4Q5SXM2 1469 aa17.78■□□□□ 0.44
LCN1-202ENST00000371781 CHD1O14646 1710 aa17.78■□□□□ 0.44
LCN1-202ENST00000371781 TNIKQ9UKE5 1360 aa17.74■□□□□ 0.43
LCN1-202ENST00000371781 FHAD1B1AJZ9 1412 aa17.72■□□□□ 0.43
LCN1-202ENST00000371781 MAGI1Q96QZ7 1491 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms