RNA–Protein interactions for RNA: ENST00000371388.4

RHOXF2-201, Transcript of Rhox homeobox family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHOXF2, Length 2,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2-201ENST00000371388 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
RHOXF2-201ENST00000371388 CCDC180Q9P1Z9 1646 aa21.35■■□□□ 1.01
RHOXF2-201ENST00000371388 SHROOM4Q9ULL8 1493 aa21.07■□□□□ 0.96
RHOXF2-201ENST00000371388 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.96
RHOXF2-201ENST00000371388 DCAF8L2P0C7V8 631 aa20.93■□□□□ 0.94
RHOXF2-201ENST00000371388 SUPT5HO00267 1087 aaKnown RBP20.51■□□□□ 0.87
RHOXF2-201ENST00000371388 DCAF1Q9Y4B6 1507 aa20.46■□□□□ 0.87
RHOXF2-201ENST00000371388 ABCC9O60706 1549 aa20.19■□□□□ 0.82
RHOXF2-201ENST00000371388 MYO15BQ96JP2 1530 aa20■□□□□ 0.79
RHOXF2-201ENST00000371388 SCRIBQ14160 1630 aa20■□□□□ 0.79
RHOXF2-201ENST00000371388 NACADO15069 1562 aa19.86■□□□□ 0.77
RHOXF2-201ENST00000371388 CHIC1Q5VXU3 224 aa19.73■□□□□ 0.75
RHOXF2-201ENST00000371388 RSF1Q96T23 1441 aaPredicted RBP19.63■□□□□ 0.73
RHOXF2-201ENST00000371388 RB1CC1Q8TDY2 1594 aa19.63■□□□□ 0.73
RHOXF2-201ENST00000371388 CECR2Q9BXF3 1484 aa19.52■□□□□ 0.72
RHOXF2-201ENST00000371388 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
RHOXF2-201ENST00000371388 PABPN1Q86U42 306 aaKnown RBP eCLIP19.27■□□□□ 0.67
RHOXF2-201ENST00000371388 UNC13AQ9UPW8 1703 aa19.26■□□□□ 0.67
RHOXF2-201ENST00000371388 WIZO95785 1651 aa19.25■□□□□ 0.67
RHOXF2-201ENST00000371388 BAZ1AQ9NRL2 1556 aaPredicted RBP19.2■□□□□ 0.66
RHOXF2-201ENST00000371388 LOC105371045A0A1W2PR82 267 aa19.16■□□□□ 0.66
RHOXF2-201ENST00000371388 TRIM41Q8WV44 630 aa19.13■□□□□ 0.65
RHOXF2-201ENST00000371388 BICRAQ9NZM4 1560 aa19.09■□□□□ 0.65
RHOXF2-201ENST00000371388 SMARCA4P51532 1647 aa19.07■□□□□ 0.64
RHOXF2-201ENST00000371388 FAM9AQ8IZU1 332 aaPredicted RBP18.98■□□□□ 0.63
RHOXF2-201ENST00000371388 TOP2AP11388 1531 aaKnown RBP18.94■□□□□ 0.62
RHOXF2-201ENST00000371388 CCDC88BA6NC98 1476 aa18.89■□□□□ 0.61
RHOXF2-201ENST00000371388 EHMT2Q96KQ7 1210 aa18.84■□□□□ 0.61
RHOXF2-201ENST00000371388 SMARCA2P51531 1590 aa18.83■□□□□ 0.6
RHOXF2-201ENST00000371388 EIF4G1Q04637 1599 aaKnown RBP18.78■□□□□ 0.6
RHOXF2-201ENST00000371388 PCGF6Q9BYE7 350 aa18.74■□□□□ 0.59
RHOXF2-201ENST00000371388 ATAD2BQ9ULI0 1458 aa18.71■□□□□ 0.59
RHOXF2-201ENST00000371388 ABCC8Q09428 1581 aa18.71■□□□□ 0.59
RHOXF2-201ENST00000371388 PEG3Q9GZU2 1588 aa18.7■□□□□ 0.58
RHOXF2-201ENST00000371388 BAZ1BQ9UIG0 1483 aaKnown RBP18.64■□□□□ 0.57
RHOXF2-201ENST00000371388 SOGA1O94964 1423 aa18.48■□□□□ 0.55
RHOXF2-201ENST00000371388 TRIM26Q12899 539 aaPredicted RBP18.46■□□□□ 0.55
RHOXF2-201ENST00000371388 WRNQ14191 1432 aaPredicted RBP eCLIP18.46■□□□□ 0.54
RHOXF2-201ENST00000371388 HRCP23327 699 aa18.44■□□□□ 0.54
RHOXF2-201ENST00000371388 RUSC2Q8N2Y8 1516 aa18.41■□□□□ 0.54
RHOXF2-201ENST00000371388 NCAPD3P42695 1498 aa18.4■□□□□ 0.54
RHOXF2-201ENST00000371388 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
RHOXF2-201ENST00000371388 SYNJ1O43426 1573 aa18.35■□□□□ 0.53
RHOXF2-201ENST00000371388 PPARGC1BQ86YN6 1023 aaKnown RBP18.34■□□□□ 0.53
RHOXF2-201ENST00000371388 HMGXB3Q12766 1538 aa18.33■□□□□ 0.53
RHOXF2-201ENST00000371388 EEA1Q15075 1411 aa18.3■□□□□ 0.52
RHOXF2-201ENST00000371388 UBTFP17480 764 aaKnown RBP18.29■□□□□ 0.52
RHOXF2-201ENST00000371388 TNIKQ9UKE5 1360 aa18.21■□□□□ 0.5
RHOXF2-201ENST00000371388 CEP162Q5TB80 1403 aa18.2■□□□□ 0.5
RHOXF2-201ENST00000371388 GOLGA3Q08378 1498 aa18.16■□□□□ 0.5
RHOXF2-201ENST00000371388 CFTRP13569 1480 aa18.15■□□□□ 0.5
RHOXF2-201ENST00000371388 TOP2BQ02880 1626 aa18.14■□□□□ 0.49
RHOXF2-201ENST00000371388 CC2D2AQ9P2K1 1620 aa18.13■□□□□ 0.49
RHOXF2-201ENST00000371388 TTBK1Q5TCY1 1321 aaPredicted RBP18.12■□□□□ 0.49
RHOXF2-201ENST00000371388 CEP164Q9UPV0 1460 aa18.1■□□□□ 0.49
RHOXF2-201ENST00000371388 CUX1P39880 1505 aa18.08■□□□□ 0.48
RHOXF2-201ENST00000371388 BIVM-ERCC5R4GMW8 1640 aa18.07■□□□□ 0.48
RHOXF2-201ENST00000371388 RANGAP1P46060 587 aaPredicted RBP18.05■□□□□ 0.48
RHOXF2-201ENST00000371388 CADPSQ9ULU8 1353 aa18.05■□□□□ 0.48
RHOXF2-201ENST00000371388 RAPGEF2Q9Y4G8 1499 aa18.03■□□□□ 0.48
RHOXF2-201ENST00000371388 KIF21BO75037 1637 aa18.03■□□□□ 0.48
RHOXF2-201ENST00000371388 CLIP1P30622 1438 aa17.96■□□□□ 0.47
RHOXF2-201ENST00000371388 KIF27Q86VH2 1401 aa17.93■□□□□ 0.46
RHOXF2-201ENST00000371388 PRXQ9BXM0 1461 aa17.89■□□□□ 0.45
RHOXF2-201ENST00000371388 PRDM2Q13029 1718 aa17.89■□□□□ 0.45
RHOXF2-201ENST00000371388 DNAJC5BQ9UF47 199 aa17.87■□□□□ 0.45
RHOXF2-201ENST00000371388 NESP48681 1621 aa17.86■□□□□ 0.45
RHOXF2-201ENST00000371388 ZEB1P37275 1124 aaPredicted RBP17.86■□□□□ 0.45
RHOXF2-201ENST00000371388 FANCD2Q9BXW9 1451 aa17.86■□□□□ 0.45
RHOXF2-201ENST00000371388 CUX2O14529 1486 aa17.84■□□□□ 0.45
RHOXF2-201ENST00000371388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.83■□□□□ 0.45
RHOXF2-201ENST00000371388 FGD5Q6ZNL6 1462 aa17.83■□□□□ 0.44
RHOXF2-201ENST00000371388 ERICH3Q5RHP9 1530 aa17.81■□□□□ 0.44
RHOXF2-201ENST00000371388 VPS8Q8N3P4 1428 aa17.81■□□□□ 0.44
RHOXF2-201ENST00000371388 APLP2Q06481 763 aa17.79■□□□□ 0.44
RHOXF2-201ENST00000371388 IGF1RP08069 1367 aa17.78■□□□□ 0.44
RHOXF2-201ENST00000371388 CCER1Q8TC90 406 aaPredicted RBP17.75■□□□□ 0.43
RHOXF2-201ENST00000371388 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.43
RHOXF2-201ENST00000371388 CARMIL1Q5VZK9 1371 aa17.7■□□□□ 0.42
RHOXF2-201ENST00000371388 TOPBP1Q92547 1522 aa17.69■□□□□ 0.42
RHOXF2-201ENST00000371388 ARAP1Q96P48 1450 aa17.69■□□□□ 0.42
RHOXF2-201ENST00000371388 DNMBPQ6XZF7 1577 aa17.68■□□□□ 0.42
RHOXF2-201ENST00000371388 POLA1P09884 1462 aaPredicted RBP17.66■□□□□ 0.42
RHOXF2-201ENST00000371388 HNRNPUL2Q1KMD3 747 aaKnown RBP17.66■□□□□ 0.42
RHOXF2-201ENST00000371388 LAMC3Q9Y6N6 1575 aa17.65■□□□□ 0.42
RHOXF2-201ENST00000371388 URB2Q14146 1524 aaKnown RBP17.61■□□□□ 0.41
RHOXF2-201ENST00000371388 ARHGAP35Q9NRY4 1499 aa17.61■□□□□ 0.41
RHOXF2-201ENST00000371388 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
RHOXF2-201ENST00000371388 KANK4Q5T7N3 995 aaPredicted RBP17.6■□□□□ 0.41
RHOXF2-201ENST00000371388 ABCA10Q8WWZ4 1543 aa17.59■□□□□ 0.41
RHOXF2-201ENST00000371388 P3H3Q8IVL6 736 aa17.55■□□□□ 0.4
RHOXF2-201ENST00000371388 TDRD9Q8NDG6 1382 aaKnown RBP17.55■□□□□ 0.4
RHOXF2-201ENST00000371388 KIF21AQ7Z4S6 1674 aa17.49■□□□□ 0.39
RHOXF2-201ENST00000371388 ATP1B4Q9UN42 357 aaPredicted RBP17.45■□□□□ 0.38
RHOXF2-201ENST00000371388 GAPVD1Q14C86 1478 aa17.43■□□□□ 0.38
RHOXF2-201ENST00000371388 WDR97A6NE52 1622 aa17.4■□□□□ 0.38
RHOXF2-201ENST00000371388 CUL7Q14999 1698 aa17.4■□□□□ 0.38
RHOXF2-201ENST00000371388 FHOD3Q2V2M9 1422 aa17.39■□□□□ 0.38
RHOXF2-201ENST00000371388 ABCA5Q8WWZ7 1642 aa17.37■□□□□ 0.37
RHOXF2-201ENST00000371388 ITGAEP38570 1179 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms