RNA–Protein interactions for RNA: ENST00000371201.3

C1orf87-201, Transcript of chromosome 1 open reading frame 87, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf87, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf87-201ENST00000371201 NISCHQ9Y2I1 1504 aa17.66■□□□□ 0.42
C1orf87-201ENST00000371201 ABCC9O60706 1549 aa16.37■□□□□ 0.21
C1orf87-201ENST00000371201 CCDC180Q9P1Z9 1646 aa16.06■□□□□ 0.16
C1orf87-201ENST00000371201 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
C1orf87-201ENST00000371201 RB1CC1Q8TDY2 1594 aa15.47■□□□□ 0.07
C1orf87-201ENST00000371201 NACADO15069 1562 aa15.27■□□□□ 0.03
C1orf87-201ENST00000371201 PABPN1Q86U42 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
C1orf87-201ENST00000371201 UNC13AQ9UPW8 1703 aa15.07■□□□□ 0
C1orf87-201ENST00000371201 DCAF8L2P0C7V8 631 aa15.02■□□□□ -0
C1orf87-201ENST00000371201 PELP1Q8IZL8 1130 aaKnown RBP15.01□□□□□ -0.01
C1orf87-201ENST00000371201 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
C1orf87-201ENST00000371201 MYO15BQ96JP2 1530 aa14.94□□□□□ -0.02
C1orf87-201ENST00000371201 SHROOM4Q9ULL8 1493 aa14.83□□□□□ -0.04
C1orf87-201ENST00000371201 CECR2Q9BXF3 1484 aa14.8□□□□□ -0.04
C1orf87-201ENST00000371201 MYT1Q01538 1121 aa14.78□□□□□ -0.04
C1orf87-201ENST00000371201 CC2D2AQ9P2K1 1620 aa14.78□□□□□ -0.04
C1orf87-201ENST00000371201 DNAJC5Q9H3Z4 198 aa14.71□□□□□ -0.05
C1orf87-201ENST00000371201 EIF4G1Q04637 1599 aaKnown RBP14.66□□□□□ -0.06
C1orf87-201ENST00000371201 DCAF1Q9Y4B6 1507 aa14.6□□□□□ -0.07
C1orf87-201ENST00000371201 ZCCHC6Q5VYS8 1495 aaKnown RBP14.56□□□□□ -0.08
C1orf87-201ENST00000371201 SCRIBQ14160 1630 aa14.55□□□□□ -0.08
C1orf87-201ENST00000371201 CUX2O14529 1486 aa14.33□□□□□ -0.12
C1orf87-201ENST00000371201 ERCC6Q03468 1493 aa14.2□□□□□ -0.14
C1orf87-201ENST00000371201 TTBK1Q5TCY1 1321 aaPredicted RBP14.18□□□□□ -0.14
C1orf87-201ENST00000371201 HRCP23327 699 aa14.1□□□□□ -0.15
C1orf87-201ENST00000371201 NCAPD3P42695 1498 aa14.07□□□□□ -0.16
C1orf87-201ENST00000371201 ATAD2BQ9ULI0 1458 aa13.97□□□□□ -0.17
C1orf87-201ENST00000371201 HMGXB3Q12766 1538 aa13.96□□□□□ -0.17
C1orf87-201ENST00000371201 SMARCA2P51531 1590 aa13.95□□□□□ -0.18
C1orf87-201ENST00000371201 NESP48681 1621 aa13.93□□□□□ -0.18
C1orf87-201ENST00000371201 THOC2Q8NI27 1593 aaKnown RBP13.91□□□□□ -0.18
C1orf87-201ENST00000371201 TRIM41Q8WV44 630 aa13.89□□□□□ -0.19
C1orf87-201ENST00000371201 SMARCA4P51532 1647 aa13.86□□□□□ -0.19
C1orf87-201ENST00000371201 LAMC3Q9Y6N6 1575 aa13.84□□□□□ -0.19
C1orf87-201ENST00000371201 BAZ1BQ9UIG0 1483 aaKnown RBP13.83□□□□□ -0.2
C1orf87-201ENST00000371201 PDS5BQ9NTI5 1447 aa13.77□□□□□ -0.2
C1orf87-201ENST00000371201 KIF21AQ7Z4S6 1674 aa13.77□□□□□ -0.21
C1orf87-201ENST00000371201 BAZ1AQ9NRL2 1556 aaPredicted RBP13.76□□□□□ -0.21
C1orf87-201ENST00000371201 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
C1orf87-201ENST00000371201 MRC2Q9UBG0 1479 aa13.67□□□□□ -0.22
C1orf87-201ENST00000371201 WDR62O43379 1518 aa13.64□□□□□ -0.23
C1orf87-201ENST00000371201 SCAF1Q9H7N4 1312 aaKnown RBP13.63□□□□□ -0.23
C1orf87-201ENST00000371201 CADPSQ9ULU8 1353 aa13.62□□□□□ -0.23
C1orf87-201ENST00000371201 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
C1orf87-201ENST00000371201 MROH2BQ7Z745 1585 aa13.57□□□□□ -0.24
C1orf87-201ENST00000371201 CEP164Q9UPV0 1460 aa13.54□□□□□ -0.24
C1orf87-201ENST00000371201 FANCD2Q9BXW9 1451 aa13.47□□□□□ -0.25
C1orf87-201ENST00000371201 PPARGC1BQ86YN6 1023 aaKnown RBP13.45□□□□□ -0.26
C1orf87-201ENST00000371201 RIMBP3CA6NJZ7 1639 aa13.44□□□□□ -0.26
C1orf87-201ENST00000371201 RIMBP3BA6NNM3 1639 aa13.44□□□□□ -0.26
C1orf87-201ENST00000371201 RIMBP3Q9UFD9 1639 aa13.44□□□□□ -0.26
C1orf87-201ENST00000371201 WIZO95785 1651 aa13.39□□□□□ -0.27
C1orf87-201ENST00000371201 PRKCSHP14314 528 aaPredicted RBP13.39□□□□□ -0.27
C1orf87-201ENST00000371201 CFTRP13569 1480 aa13.38□□□□□ -0.27
C1orf87-201ENST00000371201 URB2Q14146 1524 aaKnown RBP13.37□□□□□ -0.27
C1orf87-201ENST00000371201 ERICH6Q7L0X2 663 aa13.36□□□□□ -0.27
C1orf87-201ENST00000371201 ARHGEF11O15085 1522 aa13.36□□□□□ -0.27
C1orf87-201ENST00000371201 BCL11AQ9H165 835 aa13.3□□□□□ -0.28
C1orf87-201ENST00000371201 IFT140Q96RY7 1462 aa13.29□□□□□ -0.28
C1orf87-201ENST00000371201 PRDM2Q13029 1718 aa13.26□□□□□ -0.29
C1orf87-201ENST00000371201 CYB5RLQ6IPT4 315 aa13.25□□□□□ -0.29
C1orf87-201ENST00000371201 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
C1orf87-201ENST00000371201 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
C1orf87-201ENST00000371201 TOP2AP11388 1531 aaKnown RBP13.24□□□□□ -0.29
C1orf87-201ENST00000371201 PCGF6Q9BYE7 350 aa13.23□□□□□ -0.29
C1orf87-201ENST00000371201 APLP2Q06481 763 aa13.22□□□□□ -0.29
C1orf87-201ENST00000371201 CENPBP07199 599 aaPredicted RBP13.21□□□□□ -0.29
C1orf87-201ENST00000371201 EIF4G3O43432 1585 aaKnown RBP13.19□□□□□ -0.3
C1orf87-201ENST00000371201 ARAP1Q96P48 1450 aa13.19□□□□□ -0.3
C1orf87-201ENST00000371201 AEBP2Q6ZN18 517 aaPredicted RBP13.18□□□□□ -0.3
C1orf87-201ENST00000371201 ACIN1Q9UKV3 1341 aaKnown RBP13.18□□□□□ -0.3
C1orf87-201ENST00000371201 RSF1Q96T23 1441 aaPredicted RBP13.18□□□□□ -0.3
C1orf87-201ENST00000371201 TOPBP1Q92547 1522 aa13.17□□□□□ -0.3
C1orf87-201ENST00000371201 CHD1O14646 1710 aa13.17□□□□□ -0.3
C1orf87-201ENST00000371201 ZEB1P37275 1124 aaPredicted RBP13.17□□□□□ -0.3
C1orf87-201ENST00000371201 ABCC8Q09428 1581 aa13.17□□□□□ -0.3
C1orf87-201ENST00000371201 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
C1orf87-201ENST00000371201 FAM9AQ8IZU1 332 aaPredicted RBP13.1□□□□□ -0.31
C1orf87-201ENST00000371201 AQRO60306 1485 aaKnown RBP eCLIP13.08□□□□□ -0.31
C1orf87-201ENST00000371201 FBLN2P98095 1184 aa13.08□□□□□ -0.31
C1orf87-201ENST00000371201 TARBP1Q13395 1621 aaKnown RBP13.08□□□□□ -0.32
C1orf87-201ENST00000371201 CCDC88BA6NC98 1476 aa13.06□□□□□ -0.32
C1orf87-201ENST00000371201 CLASP1Q7Z460 1538 aa13.01□□□□□ -0.33
C1orf87-201ENST00000371201 POLA1P09884 1462 aaPredicted RBP13.01□□□□□ -0.33
C1orf87-201ENST00000371201 SYNJ1O43426 1573 aa13□□□□□ -0.33
C1orf87-201ENST00000371201 GTF3C3Q9Y5Q9 886 aa13□□□□□ -0.33
C1orf87-201ENST00000371201 WDR97A6NE52 1622 aa12.99□□□□□ -0.33
C1orf87-201ENST00000371201 NEUROD1Q13562 356 aa12.97□□□□□ -0.33
C1orf87-201ENST00000371201 SNAPC4Q5SXM2 1469 aa12.96□□□□□ -0.33
C1orf87-201ENST00000371201 MAGI1Q96QZ7 1491 aaPredicted RBP12.95□□□□□ -0.34
C1orf87-201ENST00000371201 SOGA1O94964 1423 aa12.95□□□□□ -0.34
C1orf87-201ENST00000371201 CHMP7Q8WUX9 453 aaPredicted RBP12.95□□□□□ -0.34
C1orf87-201ENST00000371201 TDRD9Q8NDG6 1382 aaKnown RBP12.94□□□□□ -0.34
C1orf87-201ENST00000371201 RAD54L2Q9Y4B4 1467 aa12.94□□□□□ -0.34
C1orf87-201ENST00000371201 GRIN2BQ13224 1484 aa12.9□□□□□ -0.34
C1orf87-201ENST00000371201 GAPVD1Q14C86 1478 aa12.9□□□□□ -0.34
C1orf87-201ENST00000371201 ANP32EQ9BTT0 268 aa12.89□□□□□ -0.35
C1orf87-201ENST00000371201 SYNJ2O15056 1496 aa12.89□□□□□ -0.35
C1orf87-201ENST00000371201 FGD5Q6ZNL6 1462 aa12.87□□□□□ -0.35
C1orf87-201ENST00000371201 TRIM26Q12899 539 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms