RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 AEBP2Q6ZN18 517 aaPredicted RBP11.25□□□□□ -0.61
CDR1-201ENST00000370532 CHIC1Q5VXU3 224 aa10.97□□□□□ -0.65
CDR1-201ENST00000370532 NISCHQ9Y2I1 1504 aa10.22□□□□□ -0.77
CDR1-201ENST00000370532 PHF23Q9BUL5 403 aaPredicted RBP9.91□□□□□ -0.82
CDR1-201ENST00000370532 POTEDQ86YR6 584 aa9.47□□□□□ -0.89
CDR1-201ENST00000370532 CCDC180Q9P1Z9 1646 aa9.37□□□□□ -0.91
CDR1-201ENST00000370532 SENP3Q9H4L4 574 aaPredicted RBP9.13□□□□□ -0.95
CDR1-201ENST00000370532 ABCC9O60706 1549 aa8.96□□□□□ -0.97
CDR1-201ENST00000370532 PLPPR3Q6T4P5 718 aa8.92□□□□□ -0.98
CDR1-201ENST00000370532 RB1CC1Q8TDY2 1594 aa8.8□□□□□ -1
CDR1-201ENST00000370532 MYO15BQ96JP2 1530 aa8.8□□□□□ -1
CDR1-201ENST00000370532 NACADO15069 1562 aa8.79□□□□□ -1
CDR1-201ENST00000370532 ADRA2BP18089 450 aa8.75□□□□□ -1.01
CDR1-201ENST00000370532 PPP6R1Q9UPN7 881 aa8.74□□□□□ -1.01
CDR1-201ENST00000370532 FOXD1Q16676 465 aa8.7□□□□□ -1.02
CDR1-201ENST00000370532 SHROOM4Q9ULL8 1493 aa8.65□□□□□ -1.03
CDR1-201ENST00000370532 DCAF1Q9Y4B6 1507 aa8.64□□□□□ -1.03
CDR1-201ENST00000370532 UNC13AQ9UPW8 1703 aa8.54□□□□□ -1.04
CDR1-201ENST00000370532 ZCCHC6Q5VYS8 1495 aaKnown RBP8.51□□□□□ -1.05
CDR1-201ENST00000370532 BICRAQ9NZM4 1560 aa8.46□□□□□ -1.05
CDR1-201ENST00000370532 DNAJC5BQ9UF47 199 aa8.3□□□□□ -1.08
CDR1-201ENST00000370532 KCNA4P22459 653 aa8.29□□□□□ -1.08
CDR1-201ENST00000370532 EIF4G1Q04637 1599 aaKnown RBP8.25□□□□□ -1.09
CDR1-201ENST00000370532 CC2D2AQ9P2K1 1620 aa8.23□□□□□ -1.09
CDR1-201ENST00000370532 SCRIBQ14160 1630 aa8.23□□□□□ -1.09
CDR1-201ENST00000370532 PABPN1Q86U42 306 aaKnown RBP eCLIP8.22□□□□□ -1.09
CDR1-201ENST00000370532 DCAF8L2P0C7V8 631 aa8.2□□□□□ -1.1
CDR1-201ENST00000370532 PIAS4Q8N2W9 510 aaPredicted RBP8.19□□□□□ -1.1
CDR1-201ENST00000370532 CECR2Q9BXF3 1484 aa8.18□□□□□ -1.1
CDR1-201ENST00000370532 EHMT2Q96KQ7 1210 aa8.06□□□□□ -1.12
CDR1-201ENST00000370532 HMGXB3Q12766 1538 aa8.05□□□□□ -1.12
CDR1-201ENST00000370532 NCAPD3P42695 1498 aa8.05□□□□□ -1.12
CDR1-201ENST00000370532 SMARCA2P51531 1590 aa8.04□□□□□ -1.12
CDR1-201ENST00000370532 PEG3Q9GZU2 1588 aa8.03□□□□□ -1.12
CDR1-201ENST00000370532 PPP4R3CPQ6ZMV5 832 aa8.01□□□□□ -1.13
CDR1-201ENST00000370532 CUX2O14529 1486 aa7.99□□□□□ -1.13
CDR1-201ENST00000370532 SMARCA4P51532 1647 aa7.99□□□□□ -1.13
CDR1-201ENST00000370532 BAZ1AQ9NRL2 1556 aaPredicted RBP7.98□□□□□ -1.13
CDR1-201ENST00000370532 ATAD2BQ9ULI0 1458 aa7.95□□□□□ -1.14
CDR1-201ENST00000370532 LAMC3Q9Y6N6 1575 aa7.91□□□□□ -1.14
CDR1-201ENST00000370532 MAPK8IP2Q13387 824 aaPredicted RBP7.87□□□□□ -1.15
CDR1-201ENST00000370532 BAZ1BQ9UIG0 1483 aaKnown RBP7.86□□□□□ -1.15
CDR1-201ENST00000370532 PELP1Q8IZL8 1130 aaKnown RBP7.84□□□□□ -1.15
CDR1-201ENST00000370532 NPM3O75607 178 aaKnown RBP7.83□□□□□ -1.16
CDR1-201ENST00000370532 THOC2Q8NI27 1593 aaKnown RBP7.82□□□□□ -1.16
CDR1-201ENST00000370532 ERCC6Q03468 1493 aa7.81□□□□□ -1.16
CDR1-201ENST00000370532 CSRNP3Q8WYN3 585 aa7.8□□□□□ -1.16
CDR1-201ENST00000370532 PDS5BQ9NTI5 1447 aa7.79□□□□□ -1.16
CDR1-201ENST00000370532 DNAJC5Q9H3Z4 198 aa7.78□□□□□ -1.16
CDR1-201ENST00000370532 MROH2BQ7Z745 1585 aa7.78□□□□□ -1.16
CDR1-201ENST00000370532 SLC4A1APQ9BWU0 796 aaKnown RBP7.76□□□□□ -1.17
CDR1-201ENST00000370532 PRDM2Q13029 1718 aa7.76□□□□□ -1.17
CDR1-201ENST00000370532 WDR62O43379 1518 aa7.74□□□□□ -1.17
CDR1-201ENST00000370532 ZBTB22O15209 634 aa7.74□□□□□ -1.17
CDR1-201ENST00000370532 CADPSQ9ULU8 1353 aa7.73□□□□□ -1.17
CDR1-201ENST00000370532 KIF21AQ7Z4S6 1674 aa7.73□□□□□ -1.17
CDR1-201ENST00000370532 MRC2Q9UBG0 1479 aa7.72□□□□□ -1.17
CDR1-201ENST00000370532 TOP2AP11388 1531 aaKnown RBP7.72□□□□□ -1.17
CDR1-201ENST00000370532 NESP48681 1621 aa7.69□□□□□ -1.18
CDR1-201ENST00000370532 CFTRP13569 1480 aa7.69□□□□□ -1.18
CDR1-201ENST00000370532 WIZO95785 1651 aa7.67□□□□□ -1.18
CDR1-201ENST00000370532 MSH5O43196 834 aa7.67□□□□□ -1.18
CDR1-201ENST00000370532 CEP164Q9UPV0 1460 aa7.66□□□□□ -1.18
CDR1-201ENST00000370532 ABCC8Q09428 1581 aa7.64□□□□□ -1.19
CDR1-201ENST00000370532 RSF1Q96T23 1441 aaPredicted RBP7.64□□□□□ -1.19
CDR1-201ENST00000370532 MYT1Q01538 1121 aa7.63□□□□□ -1.19
CDR1-201ENST00000370532 WDR97A6NE52 1622 aa7.63□□□□□ -1.19
CDR1-201ENST00000370532 NCBP3Q53F19 620 aaKnown RBP7.62□□□□□ -1.19
CDR1-201ENST00000370532 FANCD2Q9BXW9 1451 aa7.62□□□□□ -1.19
CDR1-201ENST00000370532 CNKSR2Q8WXI2 1034 aa7.61□□□□□ -1.19
CDR1-201ENST00000370532 IFT140Q96RY7 1462 aa7.56□□□□□ -1.2
CDR1-201ENST00000370532 DNMBPQ6XZF7 1577 aa7.54□□□□□ -1.2
CDR1-201ENST00000370532 URB2Q14146 1524 aaKnown RBP7.54□□□□□ -1.2
CDR1-201ENST00000370532 CCDC88BA6NC98 1476 aa7.51□□□□□ -1.21
CDR1-201ENST00000370532 HRCP23327 699 aa7.5□□□□□ -1.21
CDR1-201ENST00000370532 TOPBP1Q92547 1522 aa7.49□□□□□ -1.21
CDR1-201ENST00000370532 SCAF1Q9H7N4 1312 aaKnown RBP7.49□□□□□ -1.21
CDR1-201ENST00000370532 TARBP1Q13395 1621 aaKnown RBP7.47□□□□□ -1.21
CDR1-201ENST00000370532 EIF4G3O43432 1585 aaKnown RBP7.45□□□□□ -1.22
CDR1-201ENST00000370532 OSCARQ8IYS5 282 aa7.43□□□□□ -1.22
CDR1-201ENST00000370532 SLC4A2P04920 1241 aa7.41□□□□□ -1.22
CDR1-201ENST00000370532 MAGI1Q96QZ7 1491 aaPredicted RBP7.41□□□□□ -1.22
CDR1-201ENST00000370532 PPARGC1BQ86YN6 1023 aaKnown RBP7.4□□□□□ -1.22
CDR1-201ENST00000370532 DMRT2Q9Y5R5 561 aa7.4□□□□□ -1.23
CDR1-201ENST00000370532 RIMBP3CA6NJZ7 1639 aa7.4□□□□□ -1.23
CDR1-201ENST00000370532 RIMBP3BA6NNM3 1639 aa7.4□□□□□ -1.23
CDR1-201ENST00000370532 RIMBP3Q9UFD9 1639 aa7.4□□□□□ -1.23
CDR1-201ENST00000370532 RNF216Q9NWF9 866 aaPredicted RBP7.39□□□□□ -1.23
CDR1-201ENST00000370532 POLA1P09884 1462 aaPredicted RBP7.39□□□□□ -1.23
CDR1-201ENST00000370532 CHD1O14646 1710 aa7.39□□□□□ -1.23
CDR1-201ENST00000370532 CLASP1Q7Z460 1538 aa7.37□□□□□ -1.23
CDR1-201ENST00000370532 SYNJ1O43426 1573 aa7.37□□□□□ -1.23
CDR1-201ENST00000370532 PRKCSHP14314 528 aaPredicted RBP7.36□□□□□ -1.23
CDR1-201ENST00000370532 ARHGEF11O15085 1522 aa7.36□□□□□ -1.23
CDR1-201ENST00000370532 ZNF608Q9ULD9 1512 aaPredicted RBP7.36□□□□□ -1.23
CDR1-201ENST00000370532 BIVM-ERCC5R4GMW8 1640 aa7.36□□□□□ -1.23
CDR1-201ENST00000370532 GRIN2BQ13224 1484 aa7.35□□□□□ -1.23
CDR1-201ENST00000370532 PBRM1Q86U86 1689 aa7.35□□□□□ -1.23
CDR1-201ENST00000370532 ABCA5Q8WWZ7 1642 aa7.35□□□□□ -1.23
CDR1-201ENST00000370532 ABCA10Q8WWZ4 1543 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms