RNA–Protein interactions for RNA: ENST00000369516.6

TSPAN2-202, Transcript of tetraspanin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN2, Length 3,177 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN2-202ENST00000369516 NISCHQ9Y2I1 1504 aa24.01■■□□□ 1.43
TSPAN2-202ENST00000369516 CCDC180Q9P1Z9 1646 aa21.32■■□□□ 1
TSPAN2-202ENST00000369516 ABCC9O60706 1549 aa20.49■□□□□ 0.87
TSPAN2-202ENST00000369516 ZCCHC6Q5VYS8 1495 aaKnown RBP20.07■□□□□ 0.8
TSPAN2-202ENST00000369516 MYO15BQ96JP2 1530 aa19.97■□□□□ 0.79
TSPAN2-202ENST00000369516 NACADO15069 1562 aa19.97■□□□□ 0.79
TSPAN2-202ENST00000369516 DCAF1Q9Y4B6 1507 aa19.96■□□□□ 0.79
TSPAN2-202ENST00000369516 RB1CC1Q8TDY2 1594 aa19.92■□□□□ 0.78
TSPAN2-202ENST00000369516 DCAF8L2P0C7V8 631 aa19.78■□□□□ 0.76
TSPAN2-202ENST00000369516 UNC13AQ9UPW8 1703 aa19.43■□□□□ 0.7
TSPAN2-202ENST00000369516 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
TSPAN2-202ENST00000369516 BICRAQ9NZM4 1560 aa19.27■□□□□ 0.68
TSPAN2-202ENST00000369516 PELP1Q8IZL8 1130 aaKnown RBP19.26■□□□□ 0.67
TSPAN2-202ENST00000369516 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
TSPAN2-202ENST00000369516 PABPN1Q86U42 306 aaKnown RBP eCLIP19.14■□□□□ 0.65
TSPAN2-202ENST00000369516 MYT1Q01538 1121 aa18.9■□□□□ 0.62
TSPAN2-202ENST00000369516 EIF4G1Q04637 1599 aaKnown RBP18.75■□□□□ 0.59
TSPAN2-202ENST00000369516 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
TSPAN2-202ENST00000369516 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
TSPAN2-202ENST00000369516 CC2D2AQ9P2K1 1620 aa18.6■□□□□ 0.57
TSPAN2-202ENST00000369516 SMARCA4P51532 1647 aa18.59■□□□□ 0.57
TSPAN2-202ENST00000369516 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
TSPAN2-202ENST00000369516 MROH2BQ7Z745 1585 aa18.46■□□□□ 0.55
TSPAN2-202ENST00000369516 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
TSPAN2-202ENST00000369516 SMARCA2P51531 1590 aa18.45■□□□□ 0.54
TSPAN2-202ENST00000369516 ATAD2BQ9ULI0 1458 aa18.41■□□□□ 0.54
TSPAN2-202ENST00000369516 NCAPD3P42695 1498 aa18.39■□□□□ 0.54
TSPAN2-202ENST00000369516 HMGXB3Q12766 1538 aa18.36■□□□□ 0.53
TSPAN2-202ENST00000369516 RSF1Q96T23 1441 aaPredicted RBP18.34■□□□□ 0.53
TSPAN2-202ENST00000369516 HRCP23327 699 aa18.33■□□□□ 0.52
TSPAN2-202ENST00000369516 BAZ1BQ9UIG0 1483 aaKnown RBP18.27■□□□□ 0.52
TSPAN2-202ENST00000369516 WIZO95785 1651 aa18.27■□□□□ 0.51
TSPAN2-202ENST00000369516 TOP2AP11388 1531 aaKnown RBP18.16■□□□□ 0.5
TSPAN2-202ENST00000369516 TTBK1Q5TCY1 1321 aaPredicted RBP18.14■□□□□ 0.49
TSPAN2-202ENST00000369516 SUPT5HO00267 1087 aaKnown RBP17.91■□□□□ 0.46
TSPAN2-202ENST00000369516 LAMC3Q9Y6N6 1575 aa17.89■□□□□ 0.45
TSPAN2-202ENST00000369516 CCDC88BA6NC98 1476 aa17.88■□□□□ 0.45
TSPAN2-202ENST00000369516 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
TSPAN2-202ENST00000369516 CFTRP13569 1480 aa17.8■□□□□ 0.44
TSPAN2-202ENST00000369516 NESP48681 1621 aa17.8■□□□□ 0.44
TSPAN2-202ENST00000369516 PDS5BQ9NTI5 1447 aa17.74■□□□□ 0.43
TSPAN2-202ENST00000369516 PRDM2Q13029 1718 aa17.73■□□□□ 0.43
TSPAN2-202ENST00000369516 SCAF1Q9H7N4 1312 aaKnown RBP17.68■□□□□ 0.42
TSPAN2-202ENST00000369516 ERCC6Q03468 1493 aa17.68■□□□□ 0.42
TSPAN2-202ENST00000369516 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.42
TSPAN2-202ENST00000369516 FANCD2Q9BXW9 1451 aa17.63■□□□□ 0.41
TSPAN2-202ENST00000369516 CEP164Q9UPV0 1460 aa17.61■□□□□ 0.41
TSPAN2-202ENST00000369516 THOC2Q8NI27 1593 aaKnown RBP17.57■□□□□ 0.4
TSPAN2-202ENST00000369516 MRC2Q9UBG0 1479 aa17.55■□□□□ 0.4
TSPAN2-202ENST00000369516 WDR62O43379 1518 aa17.5■□□□□ 0.39
TSPAN2-202ENST00000369516 PPARGC1BQ86YN6 1023 aaKnown RBP17.5■□□□□ 0.39
TSPAN2-202ENST00000369516 CUX2O14529 1486 aa17.49■□□□□ 0.39
TSPAN2-202ENST00000369516 ABCC8Q09428 1581 aa17.45■□□□□ 0.38
TSPAN2-202ENST00000369516 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
TSPAN2-202ENST00000369516 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
TSPAN2-202ENST00000369516 TOPBP1Q92547 1522 aa17.38■□□□□ 0.37
TSPAN2-202ENST00000369516 CUX1P39880 1505 aa17.32■□□□□ 0.36
TSPAN2-202ENST00000369516 WRNQ14191 1432 aaPredicted RBP eCLIP17.29■□□□□ 0.36
TSPAN2-202ENST00000369516 BIVM-ERCC5R4GMW8 1640 aa17.28■□□□□ 0.36
TSPAN2-202ENST00000369516 TOP2BQ02880 1626 aa17.27■□□□□ 0.36
TSPAN2-202ENST00000369516 IFT140Q96RY7 1462 aa17.25■□□□□ 0.35
TSPAN2-202ENST00000369516 POLA1P09884 1462 aaPredicted RBP17.24■□□□□ 0.35
TSPAN2-202ENST00000369516 SYNJ1O43426 1573 aa17.24■□□□□ 0.35
TSPAN2-202ENST00000369516 FGD5Q6ZNL6 1462 aa17.23■□□□□ 0.35
TSPAN2-202ENST00000369516 TARBP1Q13395 1621 aaKnown RBP17.19■□□□□ 0.34
TSPAN2-202ENST00000369516 PCGF6Q9BYE7 350 aa17.19■□□□□ 0.34
TSPAN2-202ENST00000369516 PRKCSHP14314 528 aaPredicted RBP17.18■□□□□ 0.34
TSPAN2-202ENST00000369516 WDR97A6NE52 1622 aa17.17■□□□□ 0.34
TSPAN2-202ENST00000369516 SOGA1O94964 1423 aa17.16■□□□□ 0.34
TSPAN2-202ENST00000369516 BCL11AQ9H165 835 aa17.12■□□□□ 0.33
TSPAN2-202ENST00000369516 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
TSPAN2-202ENST00000369516 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
TSPAN2-202ENST00000369516 ACIN1Q9UKV3 1341 aaKnown RBP17.08■□□□□ 0.32
TSPAN2-202ENST00000369516 ZNF608Q9ULD9 1512 aaPredicted RBP17.08■□□□□ 0.32
TSPAN2-202ENST00000369516 EIF4G3O43432 1585 aaKnown RBP17.07■□□□□ 0.32
TSPAN2-202ENST00000369516 ZEB1P37275 1124 aaPredicted RBP17.04■□□□□ 0.32
TSPAN2-202ENST00000369516 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
TSPAN2-202ENST00000369516 ERICH6Q7L0X2 663 aa17.02■□□□□ 0.32
TSPAN2-202ENST00000369516 AQRO60306 1485 aaKnown RBP eCLIP17■□□□□ 0.31
TSPAN2-202ENST00000369516 TDRD9Q8NDG6 1382 aaKnown RBP16.99■□□□□ 0.31
TSPAN2-202ENST00000369516 CENPBP07199 599 aaPredicted RBP16.99■□□□□ 0.31
TSPAN2-202ENST00000369516 GAPVD1Q14C86 1478 aa16.98■□□□□ 0.31
TSPAN2-202ENST00000369516 GRIN2BQ13224 1484 aa16.97■□□□□ 0.31
TSPAN2-202ENST00000369516 TRIM41Q8WV44 630 aa16.97■□□□□ 0.31
TSPAN2-202ENST00000369516 APLP2Q06481 763 aa16.96■□□□□ 0.31
TSPAN2-202ENST00000369516 PBRM1Q86U86 1689 aa16.96■□□□□ 0.31
TSPAN2-202ENST00000369516 KIF27Q86VH2 1401 aa16.93■□□□□ 0.3
TSPAN2-202ENST00000369516 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
TSPAN2-202ENST00000369516 ERICH3Q5RHP9 1530 aa16.92■□□□□ 0.3
TSPAN2-202ENST00000369516 CHIC1Q5VXU3 224 aa16.9■□□□□ 0.3
TSPAN2-202ENST00000369516 FAM9AQ8IZU1 332 aaPredicted RBP16.9■□□□□ 0.3
TSPAN2-202ENST00000369516 SNAPC4Q5SXM2 1469 aa16.89■□□□□ 0.29
TSPAN2-202ENST00000369516 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
TSPAN2-202ENST00000369516 NEUROD1Q13562 356 aa16.84■□□□□ 0.29
TSPAN2-202ENST00000369516 SYNJ2O15056 1496 aa16.84■□□□□ 0.29
TSPAN2-202ENST00000369516 CUL7Q14999 1698 aa16.82■□□□□ 0.28
TSPAN2-202ENST00000369516 GTF3C3Q9Y5Q9 886 aa16.82■□□□□ 0.28
TSPAN2-202ENST00000369516 FHAD1B1AJZ9 1412 aa16.82■□□□□ 0.28
TSPAN2-202ENST00000369516 IGF1RP08069 1367 aa16.8■□□□□ 0.28
TSPAN2-202ENST00000369516 EEA1Q15075 1411 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms