RNA–Protein interactions for RNA: ENST00000369331.8

CASP7-205, Transcript of caspase 7, humanhuman

TSL 1 (best) BASIC

Gene CASP7, Length 2,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-205ENST00000369331 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
CASP7-205ENST00000369331 CCDC180Q9P1Z9 1646 aa19.89■□□□□ 0.77
CASP7-205ENST00000369331 ZCCHC6Q5VYS8 1495 aaKnown RBP19.13■□□□□ 0.65
CASP7-205ENST00000369331 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
CASP7-205ENST00000369331 ABCC9O60706 1549 aa18.71■□□□□ 0.59
CASP7-205ENST00000369331 DCAF8L2P0C7V8 631 aa18.65■□□□□ 0.58
CASP7-205ENST00000369331 MYO15BQ96JP2 1530 aa18.62■□□□□ 0.57
CASP7-205ENST00000369331 NACADO15069 1562 aa18.49■□□□□ 0.55
CASP7-205ENST00000369331 SHROOM4Q9ULL8 1493 aa18.47■□□□□ 0.55
CASP7-205ENST00000369331 RB1CC1Q8TDY2 1594 aa18.33■□□□□ 0.52
CASP7-205ENST00000369331 SCRIBQ14160 1630 aa18.23■□□□□ 0.51
CASP7-205ENST00000369331 UNC13AQ9UPW8 1703 aa17.96■□□□□ 0.46
CASP7-205ENST00000369331 SUPT5HO00267 1087 aaKnown RBP17.9■□□□□ 0.46
CASP7-205ENST00000369331 BICRAQ9NZM4 1560 aa17.77■□□□□ 0.43
CASP7-205ENST00000369331 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
CASP7-205ENST00000369331 RSF1Q96T23 1441 aaPredicted RBP17.61■□□□□ 0.41
CASP7-205ENST00000369331 PABPN1Q86U42 306 aaKnown RBP eCLIP17.6■□□□□ 0.41
CASP7-205ENST00000369331 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
CASP7-205ENST00000369331 MROH2BQ7Z745 1585 aa17.55■□□□□ 0.4
CASP7-205ENST00000369331 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
CASP7-205ENST00000369331 WIZO95785 1651 aa17.42■□□□□ 0.38
CASP7-205ENST00000369331 CHIC1Q5VXU3 224 aa17.36■□□□□ 0.37
CASP7-205ENST00000369331 PEG3Q9GZU2 1588 aa17.3■□□□□ 0.36
CASP7-205ENST00000369331 TOP2AP11388 1531 aaKnown RBP17.27■□□□□ 0.36
CASP7-205ENST00000369331 EIF4G1Q04637 1599 aaKnown RBP17.23■□□□□ 0.35
CASP7-205ENST00000369331 SMARCA2P51531 1590 aa17.2■□□□□ 0.34
CASP7-205ENST00000369331 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
CASP7-205ENST00000369331 BAZ1BQ9UIG0 1483 aaKnown RBP17.09■□□□□ 0.33
CASP7-205ENST00000369331 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
CASP7-205ENST00000369331 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
CASP7-205ENST00000369331 NCAPD3P42695 1498 aa17.04■□□□□ 0.32
CASP7-205ENST00000369331 CC2D2AQ9P2K1 1620 aa16.97■□□□□ 0.31
CASP7-205ENST00000369331 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
CASP7-205ENST00000369331 TRIM41Q8WV44 630 aa16.75■□□□□ 0.27
CASP7-205ENST00000369331 LOC105371045A0A1W2PR82 267 aa16.74■□□□□ 0.27
CASP7-205ENST00000369331 ABCC8Q09428 1581 aa16.69■□□□□ 0.26
CASP7-205ENST00000369331 CFTRP13569 1480 aa16.66■□□□□ 0.26
CASP7-205ENST00000369331 PRDM2Q13029 1718 aa16.63■□□□□ 0.25
CASP7-205ENST00000369331 WRNQ14191 1432 aaPredicted RBP eCLIP16.59■□□□□ 0.25
CASP7-205ENST00000369331 CADPSQ9ULU8 1353 aa16.58■□□□□ 0.25
CASP7-205ENST00000369331 SYNJ1O43426 1573 aa16.54■□□□□ 0.24
CASP7-205ENST00000369331 FAM9AQ8IZU1 332 aaPredicted RBP16.52■□□□□ 0.23
CASP7-205ENST00000369331 TOP2BQ02880 1626 aa16.49■□□□□ 0.23
CASP7-205ENST00000369331 BIVM-ERCC5R4GMW8 1640 aa16.49■□□□□ 0.23
CASP7-205ENST00000369331 LAMC3Q9Y6N6 1575 aa16.48■□□□□ 0.23
CASP7-205ENST00000369331 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
CASP7-205ENST00000369331 NESP48681 1621 aa16.43■□□□□ 0.22
CASP7-205ENST00000369331 CUX1P39880 1505 aa16.42■□□□□ 0.22
CASP7-205ENST00000369331 FANCD2Q9BXW9 1451 aa16.41■□□□□ 0.22
CASP7-205ENST00000369331 EEA1Q15075 1411 aa16.38■□□□□ 0.21
CASP7-205ENST00000369331 PCGF6Q9BYE7 350 aa16.36■□□□□ 0.21
CASP7-205ENST00000369331 SOGA1O94964 1423 aa16.36■□□□□ 0.21
CASP7-205ENST00000369331 PDS5BQ9NTI5 1447 aa16.33■□□□□ 0.2
CASP7-205ENST00000369331 CEP164Q9UPV0 1460 aa16.33■□□□□ 0.2
CASP7-205ENST00000369331 EHMT2Q96KQ7 1210 aa16.31■□□□□ 0.2
CASP7-205ENST00000369331 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
CASP7-205ENST00000369331 RUSC2Q8N2Y8 1516 aa16.29■□□□□ 0.2
CASP7-205ENST00000369331 KIF21AQ7Z4S6 1674 aa16.27■□□□□ 0.2
CASP7-205ENST00000369331 TOPBP1Q92547 1522 aa16.24■□□□□ 0.19
CASP7-205ENST00000369331 FGD5Q6ZNL6 1462 aa16.24■□□□□ 0.19
CASP7-205ENST00000369331 HRCP23327 699 aa16.22■□□□□ 0.19
CASP7-205ENST00000369331 CSRNP3Q8WYN3 585 aa16.22■□□□□ 0.19
CASP7-205ENST00000369331 URB2Q14146 1524 aaKnown RBP16.22■□□□□ 0.19
CASP7-205ENST00000369331 TRIM26Q12899 539 aaPredicted RBP16.2■□□□□ 0.18
CASP7-205ENST00000369331 KIF21BO75037 1637 aa16.18■□□□□ 0.18
CASP7-205ENST00000369331 KIF27Q86VH2 1401 aa16.17■□□□□ 0.18
CASP7-205ENST00000369331 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
CASP7-205ENST00000369331 GOLGA3Q08378 1498 aa16.14■□□□□ 0.17
CASP7-205ENST00000369331 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
CASP7-205ENST00000369331 CUX2O14529 1486 aa16.12■□□□□ 0.17
CASP7-205ENST00000369331 TNIKQ9UKE5 1360 aa16.11■□□□□ 0.17
CASP7-205ENST00000369331 ABCA10Q8WWZ4 1543 aa16.11■□□□□ 0.17
CASP7-205ENST00000369331 CEP162Q5TB80 1403 aa16.1■□□□□ 0.17
CASP7-205ENST00000369331 WDR97A6NE52 1622 aa16.1■□□□□ 0.17
CASP7-205ENST00000369331 RAD54L2Q9Y4B4 1467 aa16.08■□□□□ 0.17
CASP7-205ENST00000369331 WDR62O43379 1518 aa16.07■□□□□ 0.16
CASP7-205ENST00000369331 ERICH3Q5RHP9 1530 aa16.07■□□□□ 0.16
CASP7-205ENST00000369331 PRXQ9BXM0 1461 aa16.07■□□□□ 0.16
CASP7-205ENST00000369331 ERCC6Q03468 1493 aa16.06■□□□□ 0.16
CASP7-205ENST00000369331 RAPGEF2Q9Y4G8 1499 aa16.04■□□□□ 0.16
CASP7-205ENST00000369331 THOC2Q8NI27 1593 aaKnown RBP16.03■□□□□ 0.16
CASP7-205ENST00000369331 TARBP1Q13395 1621 aaKnown RBP16.02■□□□□ 0.15
CASP7-205ENST00000369331 ABCA5Q8WWZ7 1642 aa16.01■□□□□ 0.15
CASP7-205ENST00000369331 IGF1RP08069 1367 aa16■□□□□ 0.15
CASP7-205ENST00000369331 UBTFP17480 764 aaKnown RBP15.99■□□□□ 0.15
CASP7-205ENST00000369331 CUL7Q14999 1698 aa15.95■□□□□ 0.14
CASP7-205ENST00000369331 IFT140Q96RY7 1462 aa15.94■□□□□ 0.14
CASP7-205ENST00000369331 PPARGC1BQ86YN6 1023 aaKnown RBP15.93■□□□□ 0.14
CASP7-205ENST00000369331 GAPVD1Q14C86 1478 aa15.93■□□□□ 0.14
CASP7-205ENST00000369331 CARMIL1Q5VZK9 1371 aa15.92■□□□□ 0.14
CASP7-205ENST00000369331 TDRD9Q8NDG6 1382 aaKnown RBP15.9■□□□□ 0.14
CASP7-205ENST00000369331 PBRM1Q86U86 1689 aa15.88■□□□□ 0.13
CASP7-205ENST00000369331 CLIP1P30622 1438 aa15.86■□□□□ 0.13
CASP7-205ENST00000369331 ZNF608Q9ULD9 1512 aaPredicted RBP15.82■□□□□ 0.12
CASP7-205ENST00000369331 AQRO60306 1485 aaKnown RBP eCLIP15.81■□□□□ 0.12
CASP7-205ENST00000369331 GRIN2BQ13224 1484 aa15.81■□□□□ 0.12
CASP7-205ENST00000369331 EIF4G3O43432 1585 aaKnown RBP15.81■□□□□ 0.12
CASP7-205ENST00000369331 ADAMTS12P58397 1594 aa15.8■□□□□ 0.12
CASP7-205ENST00000369331 VPS8Q8N3P4 1428 aa15.78■□□□□ 0.12
CASP7-205ENST00000369331 CTTNBP2Q8WZ74 1663 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 397.4 ms