RNA–Protein interactions for RNA: ENST00000369234.4

GFRA1-202, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene GFRA1, Length 1,807 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-202ENST00000369234 NISCHQ9Y2I1 1504 aa55.11■■■■■ 6.41
GFRA1-202ENST00000369234 CCDC180Q9P1Z9 1646 aa48.21■■■■■ 5.31
GFRA1-202ENST00000369234 ZCCHC6Q5VYS8 1495 aaKnown RBP46.2■■■■■ 4.99
GFRA1-202ENST00000369234 ABCC9O60706 1549 aa46.16■■■■■ 4.98
GFRA1-202ENST00000369234 DCAF8L2P0C7V8 631 aa45.73■■■■■ 4.91
GFRA1-202ENST00000369234 DCAF1Q9Y4B6 1507 aa45.51■■■■■ 4.88
GFRA1-202ENST00000369234 MYO15BQ96JP2 1530 aa45.13■■■■■ 4.82
GFRA1-202ENST00000369234 NACADO15069 1562 aa45.04■■■■■ 4.8
GFRA1-202ENST00000369234 RB1CC1Q8TDY2 1594 aa44.77■■■■■ 4.76
GFRA1-202ENST00000369234 SHROOM4Q9ULL8 1493 aa44.72■■■■■ 4.75
GFRA1-202ENST00000369234 SCRIBQ14160 1630 aa44.38■■■■■ 4.69
GFRA1-202ENST00000369234 UNC13AQ9UPW8 1703 aa43.87■■■■■ 4.61
GFRA1-202ENST00000369234 BICRAQ9NZM4 1560 aa43.5■■■■■ 4.55
GFRA1-202ENST00000369234 PABPN1Q86U42 306 aaKnown RBP eCLIP43.46■■■■■ 4.55
GFRA1-202ENST00000369234 CECR2Q9BXF3 1484 aa42.93■■■■■ 4.46
GFRA1-202ENST00000369234 SUPT5HO00267 1087 aaKnown RBP42.8■■■■■ 4.44
GFRA1-202ENST00000369234 MROH2BQ7Z745 1585 aa42.6■■■■■ 4.41
GFRA1-202ENST00000369234 RSF1Q96T23 1441 aaPredicted RBP42.6■■■■■ 4.41
GFRA1-202ENST00000369234 BAZ1AQ9NRL2 1556 aaPredicted RBP42.56■■■■■ 4.4
GFRA1-202ENST00000369234 SMARCA4P51532 1647 aa42.47■■■■■ 4.39
GFRA1-202ENST00000369234 WIZO95785 1651 aa42.21■■■■■ 4.35
GFRA1-202ENST00000369234 EIF4G1Q04637 1599 aaKnown RBP42.21■■■■■ 4.35
GFRA1-202ENST00000369234 PEG3Q9GZU2 1588 aa41.94■■■■■ 4.3
GFRA1-202ENST00000369234 ATAD2BQ9ULI0 1458 aa41.9■■■■■ 4.3
GFRA1-202ENST00000369234 SMARCA2P51531 1590 aa41.82■■■■■ 4.28
GFRA1-202ENST00000369234 TOP2AP11388 1531 aaKnown RBP41.73■■■■■ 4.27
GFRA1-202ENST00000369234 CC2D2AQ9P2K1 1620 aa41.71■■■■■ 4.27
GFRA1-202ENST00000369234 BAZ1BQ9UIG0 1483 aaKnown RBP41.63■■■■■ 4.26
GFRA1-202ENST00000369234 NCAPD3P42695 1498 aa41.6■■■■■ 4.25
GFRA1-202ENST00000369234 HMGXB3Q12766 1538 aa41.48■■■■■ 4.23
GFRA1-202ENST00000369234 CCDC88BA6NC98 1476 aa41.33■■■■■ 4.21
GFRA1-202ENST00000369234 DNAJC5BQ9UF47 199 aa41.21■■■■■ 4.19
GFRA1-202ENST00000369234 CHIC1Q5VXU3 224 aa40.75■■■■■ 4.11
GFRA1-202ENST00000369234 CFTRP13569 1480 aa40.56■■■■■ 4.08
GFRA1-202ENST00000369234 CADPSQ9ULU8 1353 aa40.51■■■■■ 4.08
GFRA1-202ENST00000369234 NESP48681 1621 aa40.39■■■■■ 4.06
GFRA1-202ENST00000369234 ABCC8Q09428 1581 aa40.34■■■■■ 4.05
GFRA1-202ENST00000369234 TRIM41Q8WV44 630 aa40.23■■■■■ 4.03
GFRA1-202ENST00000369234 LAMC3Q9Y6N6 1575 aa40.23■■■■■ 4.03
GFRA1-202ENST00000369234 PRDM2Q13029 1718 aa40.23■■■■■ 4.03
GFRA1-202ENST00000369234 WRNQ14191 1432 aaPredicted RBP eCLIP40.09■■■■■ 4.01
GFRA1-202ENST00000369234 FANCD2Q9BXW9 1451 aa40.08■■■■■ 4.01
GFRA1-202ENST00000369234 SYNJ1O43426 1573 aa39.97■■■■□ 3.99
GFRA1-202ENST00000369234 PDS5BQ9NTI5 1447 aa39.95■■■■□ 3.99
GFRA1-202ENST00000369234 CUX1P39880 1505 aa39.86■■■■□ 3.97
GFRA1-202ENST00000369234 CEP164Q9UPV0 1460 aa39.86■■■■□ 3.97
GFRA1-202ENST00000369234 KIF21AQ7Z4S6 1674 aa39.83■■■■□ 3.97
GFRA1-202ENST00000369234 TOP2BQ02880 1626 aa39.8■■■■□ 3.96
GFRA1-202ENST00000369234 BIVM-ERCC5R4GMW8 1640 aa39.75■■■■□ 3.95
GFRA1-202ENST00000369234 URB2Q14146 1524 aaKnown RBP39.63■■■■□ 3.93
GFRA1-202ENST00000369234 DNMBPQ6XZF7 1577 aa39.61■■■■□ 3.93
GFRA1-202ENST00000369234 TOPBP1Q92547 1522 aa39.6■■■■□ 3.93
GFRA1-202ENST00000369234 ERCC6Q03468 1493 aa39.58■■■■□ 3.93
GFRA1-202ENST00000369234 FAM9AQ8IZU1 332 aaPredicted RBP39.54■■■■□ 3.92
GFRA1-202ENST00000369234 MRC2Q9UBG0 1479 aa39.5■■■■□ 3.91
GFRA1-202ENST00000369234 FGD5Q6ZNL6 1462 aa39.5■■■■□ 3.91
GFRA1-202ENST00000369234 SOGA1O94964 1423 aa39.49■■■■□ 3.91
GFRA1-202ENST00000369234 RUSC2Q8N2Y8 1516 aa39.39■■■■□ 3.9
GFRA1-202ENST00000369234 POLA1P09884 1462 aaPredicted RBP39.37■■■■□ 3.89
GFRA1-202ENST00000369234 THOC2Q8NI27 1593 aaKnown RBP39.31■■■■□ 3.88
GFRA1-202ENST00000369234 WDR62O43379 1518 aa39.3■■■■□ 3.88
GFRA1-202ENST00000369234 RAD54L2Q9Y4B4 1467 aa39.28■■■■□ 3.88
GFRA1-202ENST00000369234 LOC105371045A0A1W2PR82 267 aa39.23■■■■□ 3.87
GFRA1-202ENST00000369234 EEA1Q15075 1411 aa39.21■■■■□ 3.87
GFRA1-202ENST00000369234 CUX2O14529 1486 aa39.14■■■■□ 3.86
GFRA1-202ENST00000369234 CSRNP3Q8WYN3 585 aa39.12■■■■□ 3.85
GFRA1-202ENST00000369234 ABCA10Q8WWZ4 1543 aa39.1■■■■□ 3.85
GFRA1-202ENST00000369234 KIF27Q86VH2 1401 aa39.09■■■■□ 3.85
GFRA1-202ENST00000369234 EHMT2Q96KQ7 1210 aa39.04■■■■□ 3.84
GFRA1-202ENST00000369234 TARBP1Q13395 1621 aaKnown RBP39.03■■■■□ 3.84
GFRA1-202ENST00000369234 WDR97A6NE52 1622 aa39.01■■■■□ 3.83
GFRA1-202ENST00000369234 TDRD9Q8NDG6 1382 aaKnown RBP38.93■■■■□ 3.82
GFRA1-202ENST00000369234 IFT140Q96RY7 1462 aa38.92■■■■□ 3.82
GFRA1-202ENST00000369234 IGF1RP08069 1367 aa38.84■■■■□ 3.81
GFRA1-202ENST00000369234 ABCA5Q8WWZ7 1642 aa38.83■■■■□ 3.81
GFRA1-202ENST00000369234 ZNF608Q9ULD9 1512 aaPredicted RBP38.81■■■■□ 3.8
GFRA1-202ENST00000369234 GAPVD1Q14C86 1478 aa38.78■■■■□ 3.8
GFRA1-202ENST00000369234 AQRO60306 1485 aaKnown RBP eCLIP38.77■■■■□ 3.8
GFRA1-202ENST00000369234 KIF21BO75037 1637 aa38.75■■■■□ 3.79
GFRA1-202ENST00000369234 PRXQ9BXM0 1461 aa38.73■■■■□ 3.79
GFRA1-202ENST00000369234 GOLGA3Q08378 1498 aa38.69■■■■□ 3.78
GFRA1-202ENST00000369234 RAPGEF2Q9Y4G8 1499 aa38.69■■■■□ 3.78
GFRA1-202ENST00000369234 CARMIL1Q5VZK9 1371 aa38.62■■■■□ 3.77
GFRA1-202ENST00000369234 EIF4G3O43432 1585 aaKnown RBP38.62■■■■□ 3.77
GFRA1-202ENST00000369234 ERICH3Q5RHP9 1530 aa38.61■■■■□ 3.77
GFRA1-202ENST00000369234 UBTFP17480 764 aaKnown RBP38.59■■■■□ 3.77
GFRA1-202ENST00000369234 PBRM1Q86U86 1689 aa38.57■■■■□ 3.76
GFRA1-202ENST00000369234 GRIN2BQ13224 1484 aa38.54■■■■□ 3.76
GFRA1-202ENST00000369234 CUL7Q14999 1698 aa38.51■■■■□ 3.75
GFRA1-202ENST00000369234 TNIKQ9UKE5 1360 aa38.51■■■■□ 3.75
GFRA1-202ENST00000369234 SNAPC4Q5SXM2 1469 aa38.38■■■■□ 3.74
GFRA1-202ENST00000369234 ADAMTS12P58397 1594 aa38.37■■■■□ 3.73
GFRA1-202ENST00000369234 FHAD1B1AJZ9 1412 aa38.34■■■■□ 3.73
GFRA1-202ENST00000369234 CEP162Q5TB80 1403 aa38.29■■■■□ 3.72
GFRA1-202ENST00000369234 MAGI1Q96QZ7 1491 aaPredicted RBP38.25■■■■□ 3.71
GFRA1-202ENST00000369234 RANGAP1P46060 587 aaPredicted RBP38.17■■■■□ 3.7
GFRA1-202ENST00000369234 SYNJ2O15056 1496 aa38.13■■■■□ 3.69
GFRA1-202ENST00000369234 GRIN2AQ12879 1464 aa38.09■■■■□ 3.69
GFRA1-202ENST00000369234 CLIP1P30622 1438 aa38.09■■■■□ 3.69
GFRA1-202ENST00000369234 CHMP7Q8WUX9 453 aaPredicted RBP38.08■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms