RNA–Protein interactions for RNA: ENST00000368735.1

TRAF3IP2-206, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 2 BASIC

Gene TRAF3IP2, Length 903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-206ENST00000368735 NISCHQ9Y2I1 1504 aa29.01■■■□□ 2.23
TRAF3IP2-206ENST00000368735 CCDC180Q9P1Z9 1646 aa25.73■■□□□ 1.71
TRAF3IP2-206ENST00000368735 ABCC9O60706 1549 aa25.04■■□□□ 1.6
TRAF3IP2-206ENST00000368735 AEBP2Q6ZN18 517 aaPredicted RBP24.38■■□□□ 1.49
TRAF3IP2-206ENST00000368735 DCAF8L2P0C7V8 631 aa24.31■■□□□ 1.48
TRAF3IP2-206ENST00000368735 ZCCHC6Q5VYS8 1495 aaKnown RBP24.2■■□□□ 1.47
TRAF3IP2-206ENST00000368735 RB1CC1Q8TDY2 1594 aa24.14■■□□□ 1.45
TRAF3IP2-206ENST00000368735 NACADO15069 1562 aa24.12■■□□□ 1.45
TRAF3IP2-206ENST00000368735 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
TRAF3IP2-206ENST00000368735 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
TRAF3IP2-206ENST00000368735 UNC13AQ9UPW8 1703 aa23.61■■□□□ 1.37
TRAF3IP2-206ENST00000368735 SCRIBQ14160 1630 aa23.56■■□□□ 1.36
TRAF3IP2-206ENST00000368735 PABPN1Q86U42 306 aaKnown RBP eCLIP23.44■■□□□ 1.34
TRAF3IP2-206ENST00000368735 BICRAQ9NZM4 1560 aa23.35■■□□□ 1.33
TRAF3IP2-206ENST00000368735 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
TRAF3IP2-206ENST00000368735 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
TRAF3IP2-206ENST00000368735 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
TRAF3IP2-206ENST00000368735 DNAJC5BQ9UF47 199 aa22.72■■□□□ 1.23
TRAF3IP2-206ENST00000368735 CC2D2AQ9P2K1 1620 aa22.64■■□□□ 1.21
TRAF3IP2-206ENST00000368735 CECR2Q9BXF3 1484 aa22.59■■□□□ 1.21
TRAF3IP2-206ENST00000368735 SMARCA4P51532 1647 aa22.5■■□□□ 1.19
TRAF3IP2-206ENST00000368735 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
TRAF3IP2-206ENST00000368735 MROH2BQ7Z745 1585 aa22.38■■□□□ 1.17
TRAF3IP2-206ENST00000368735 SMARCA2P51531 1590 aa22.31■■□□□ 1.16
TRAF3IP2-206ENST00000368735 ATAD2BQ9ULI0 1458 aa22.29■■□□□ 1.16
TRAF3IP2-206ENST00000368735 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
TRAF3IP2-206ENST00000368735 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
TRAF3IP2-206ENST00000368735 WIZO95785 1651 aa22.19■■□□□ 1.14
TRAF3IP2-206ENST00000368735 BAZ1BQ9UIG0 1483 aaKnown RBP22.18■■□□□ 1.14
TRAF3IP2-206ENST00000368735 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
TRAF3IP2-206ENST00000368735 HMGXB3Q12766 1538 aa22.16■■□□□ 1.14
TRAF3IP2-206ENST00000368735 TOP2AP11388 1531 aaKnown RBP21.94■■□□□ 1.1
TRAF3IP2-206ENST00000368735 SUPT5HO00267 1087 aaKnown RBP21.89■■□□□ 1.09
TRAF3IP2-206ENST00000368735 NESP48681 1621 aa21.7■■□□□ 1.06
TRAF3IP2-206ENST00000368735 CCDC88BA6NC98 1476 aa21.66■■□□□ 1.06
TRAF3IP2-206ENST00000368735 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
TRAF3IP2-206ENST00000368735 CADPSQ9ULU8 1353 aa21.62■■□□□ 1.05
TRAF3IP2-206ENST00000368735 ERCC6Q03468 1493 aa21.61■■□□□ 1.05
TRAF3IP2-206ENST00000368735 PDS5BQ9NTI5 1447 aa21.52■■□□□ 1.04
TRAF3IP2-206ENST00000368735 CFTRP13569 1480 aa21.52■■□□□ 1.03
TRAF3IP2-206ENST00000368735 KIF21AQ7Z4S6 1674 aa21.49■■□□□ 1.03
TRAF3IP2-206ENST00000368735 PRDM2Q13029 1718 aa21.45■■□□□ 1.02
TRAF3IP2-206ENST00000368735 FANCD2Q9BXW9 1451 aa21.4■■□□□ 1.02
TRAF3IP2-206ENST00000368735 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
TRAF3IP2-206ENST00000368735 THOC2Q8NI27 1593 aaKnown RBP21.31■■□□□ 1
TRAF3IP2-206ENST00000368735 MRC2Q9UBG0 1479 aa21.29■■□□□ 1
TRAF3IP2-206ENST00000368735 CUX2O14529 1486 aa21.21■□□□□ 0.99
TRAF3IP2-206ENST00000368735 WDR62O43379 1518 aa21.19■□□□□ 0.98
TRAF3IP2-206ENST00000368735 URB2Q14146 1524 aaKnown RBP21.16■□□□□ 0.98
TRAF3IP2-206ENST00000368735 DNMBPQ6XZF7 1577 aa21.08■□□□□ 0.97
TRAF3IP2-206ENST00000368735 TOPBP1Q92547 1522 aa21.08■□□□□ 0.96
TRAF3IP2-206ENST00000368735 ABCC8Q09428 1581 aa21.07■□□□□ 0.96
TRAF3IP2-206ENST00000368735 CUX1P39880 1505 aa20.99■□□□□ 0.95
TRAF3IP2-206ENST00000368735 WRNQ14191 1432 aaPredicted RBP eCLIP20.95■□□□□ 0.94
TRAF3IP2-206ENST00000368735 POLA1P09884 1462 aaPredicted RBP20.91■□□□□ 0.94
TRAF3IP2-206ENST00000368735 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
TRAF3IP2-206ENST00000368735 IFT140Q96RY7 1462 aa20.89■□□□□ 0.94
TRAF3IP2-206ENST00000368735 SYNJ1O43426 1573 aa20.89■□□□□ 0.93
TRAF3IP2-206ENST00000368735 SENP3Q9H4L4 574 aaPredicted RBP20.88■□□□□ 0.93
TRAF3IP2-206ENST00000368735 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
TRAF3IP2-206ENST00000368735 BIVM-ERCC5R4GMW8 1640 aa20.86■□□□□ 0.93
TRAF3IP2-206ENST00000368735 RAD54L2Q9Y4B4 1467 aa20.84■□□□□ 0.93
TRAF3IP2-206ENST00000368735 SOGA1O94964 1423 aa20.84■□□□□ 0.93
TRAF3IP2-206ENST00000368735 TARBP1Q13395 1621 aaKnown RBP20.82■□□□□ 0.92
TRAF3IP2-206ENST00000368735 ZNF608Q9ULD9 1512 aaPredicted RBP20.79■□□□□ 0.92
TRAF3IP2-206ENST00000368735 EIF4G3O43432 1585 aaKnown RBP20.74■□□□□ 0.91
TRAF3IP2-206ENST00000368735 AQRO60306 1485 aaKnown RBP eCLIP20.71■□□□□ 0.91
TRAF3IP2-206ENST00000368735 WDR97A6NE52 1622 aa20.71■□□□□ 0.91
TRAF3IP2-206ENST00000368735 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
TRAF3IP2-206ENST00000368735 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
TRAF3IP2-206ENST00000368735 TRIM41Q8WV44 630 aa20.64■□□□□ 0.89
TRAF3IP2-206ENST00000368735 PHF23Q9BUL5 403 aaPredicted RBP20.61■□□□□ 0.89
TRAF3IP2-206ENST00000368735 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
TRAF3IP2-206ENST00000368735 ABCA5Q8WWZ7 1642 aa20.6■□□□□ 0.89
TRAF3IP2-206ENST00000368735 PBRM1Q86U86 1689 aa20.59■□□□□ 0.89
TRAF3IP2-206ENST00000368735 GRIN2BQ13224 1484 aa20.57■□□□□ 0.88
TRAF3IP2-206ENST00000368735 SNAPC4Q5SXM2 1469 aa20.54■□□□□ 0.88
TRAF3IP2-206ENST00000368735 FBLN2P98095 1184 aa20.51■□□□□ 0.87
TRAF3IP2-206ENST00000368735 KIF27Q86VH2 1401 aa20.5■□□□□ 0.87
TRAF3IP2-206ENST00000368735 MAGI1Q96QZ7 1491 aaPredicted RBP20.49■□□□□ 0.87
TRAF3IP2-206ENST00000368735 CHD1O14646 1710 aa20.47■□□□□ 0.87
TRAF3IP2-206ENST00000368735 ERICH3Q5RHP9 1530 aa20.44■□□□□ 0.86
TRAF3IP2-206ENST00000368735 CHMP7Q8WUX9 453 aaPredicted RBP20.44■□□□□ 0.86
TRAF3IP2-206ENST00000368735 SYNJ2O15056 1496 aa20.41■□□□□ 0.86
TRAF3IP2-206ENST00000368735 ADAMTS12P58397 1594 aa20.41■□□□□ 0.86
TRAF3IP2-206ENST00000368735 OSCARQ8IYS5 282 aa20.4■□□□□ 0.86
TRAF3IP2-206ENST00000368735 FHAD1B1AJZ9 1412 aa20.36■□□□□ 0.85
TRAF3IP2-206ENST00000368735 RUSC2Q8N2Y8 1516 aa20.36■□□□□ 0.85
TRAF3IP2-206ENST00000368735 IGF1RP08069 1367 aa20.34■□□□□ 0.85
TRAF3IP2-206ENST00000368735 CUL7Q14999 1698 aa20.33■□□□□ 0.85
TRAF3IP2-206ENST00000368735 DNAJC5Q9H3Z4 198 aa20.31■□□□□ 0.84
TRAF3IP2-206ENST00000368735 GRIN2AQ12879 1464 aa20.3■□□□□ 0.84
TRAF3IP2-206ENST00000368735 CARMIL1Q5VZK9 1371 aa20.26■□□□□ 0.83
TRAF3IP2-206ENST00000368735 FAM9AQ8IZU1 332 aaPredicted RBP20.26■□□□□ 0.83
TRAF3IP2-206ENST00000368735 EEA1Q15075 1411 aa20.21■□□□□ 0.83
TRAF3IP2-206ENST00000368735 CEP170Q5SW79 1584 aa20.2■□□□□ 0.82
TRAF3IP2-206ENST00000368735 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
TRAF3IP2-206ENST00000368735 CSRNP3Q8WYN3 585 aa20.17■□□□□ 0.82
TRAF3IP2-206ENST00000368735 NUP160Q12769 1436 aa20.17■□□□□ 0.82
TRAF3IP2-206ENST00000368735 RAPGEF2Q9Y4G8 1499 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms