RNA–Protein interactions for RNA: ENST00000368003.5

UFC1-201, Transcript of ubiquitin-fold modifier conjugating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFC1, Length 1,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFC1-201ENST00000368003 NISCHQ9Y2I1 1504 aa27.31■■□□□ 1.96
UFC1-201ENST00000368003 CCDC180Q9P1Z9 1646 aa23.92■■□□□ 1.42
UFC1-201ENST00000368003 ZCCHC6Q5VYS8 1495 aaKnown RBP22.9■■□□□ 1.26
UFC1-201ENST00000368003 AEBP2Q6ZN18 517 aaPredicted RBP22.82■■□□□ 1.24
UFC1-201ENST00000368003 ABCC9O60706 1549 aa22.68■■□□□ 1.22
UFC1-201ENST00000368003 DCAF8L2P0C7V8 631 aa22.61■■□□□ 1.21
UFC1-201ENST00000368003 DCAF1Q9Y4B6 1507 aa22.6■■□□□ 1.21
UFC1-201ENST00000368003 MYO15BQ96JP2 1530 aa22.38■■□□□ 1.17
UFC1-201ENST00000368003 NACADO15069 1562 aa22.3■■□□□ 1.16
UFC1-201ENST00000368003 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
UFC1-201ENST00000368003 SHROOM4Q9ULL8 1493 aa22.15■■□□□ 1.14
UFC1-201ENST00000368003 SCRIBQ14160 1630 aa21.92■■□□□ 1.1
UFC1-201ENST00000368003 UNC13AQ9UPW8 1703 aa21.65■■□□□ 1.06
UFC1-201ENST00000368003 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
UFC1-201ENST00000368003 BICRAQ9NZM4 1560 aa21.42■■□□□ 1.02
UFC1-201ENST00000368003 PABPN1Q86U42 306 aaKnown RBP eCLIP21.36■■□□□ 1.01
UFC1-201ENST00000368003 SUPT5HO00267 1087 aaKnown RBP21.27■■□□□ 1
UFC1-201ENST00000368003 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
UFC1-201ENST00000368003 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
UFC1-201ENST00000368003 BAZ1AQ9NRL2 1556 aaPredicted RBP21.11■□□□□ 0.97
UFC1-201ENST00000368003 MROH2BQ7Z745 1585 aa21.06■□□□□ 0.96
UFC1-201ENST00000368003 SMARCA4P51532 1647 aa21.02■□□□□ 0.96
UFC1-201ENST00000368003 WIZO95785 1651 aa20.9■□□□□ 0.94
UFC1-201ENST00000368003 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
UFC1-201ENST00000368003 PEG3Q9GZU2 1588 aa20.77■□□□□ 0.92
UFC1-201ENST00000368003 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
UFC1-201ENST00000368003 ATAD2BQ9ULI0 1458 aa20.7■□□□□ 0.9
UFC1-201ENST00000368003 TOP2AP11388 1531 aaKnown RBP20.7■□□□□ 0.9
UFC1-201ENST00000368003 BAZ1BQ9UIG0 1483 aaKnown RBP20.6■□□□□ 0.89
UFC1-201ENST00000368003 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
UFC1-201ENST00000368003 CC2D2AQ9P2K1 1620 aa20.53■□□□□ 0.88
UFC1-201ENST00000368003 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
UFC1-201ENST00000368003 CCDC88BA6NC98 1476 aa20.48■□□□□ 0.87
UFC1-201ENST00000368003 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.85
UFC1-201ENST00000368003 CFTRP13569 1480 aa20.05■□□□□ 0.8
UFC1-201ENST00000368003 TRIM41Q8WV44 630 aa20.04■□□□□ 0.8
UFC1-201ENST00000368003 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
UFC1-201ENST00000368003 PRDM2Q13029 1718 aa19.99■□□□□ 0.79
UFC1-201ENST00000368003 ABCC8Q09428 1581 aa19.98■□□□□ 0.79
UFC1-201ENST00000368003 LAMC3Q9Y6N6 1575 aa19.91■□□□□ 0.78
UFC1-201ENST00000368003 WRNQ14191 1432 aaPredicted RBP eCLIP19.9■□□□□ 0.78
UFC1-201ENST00000368003 NESP48681 1621 aa19.85■□□□□ 0.77
UFC1-201ENST00000368003 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
UFC1-201ENST00000368003 SYNJ1O43426 1573 aa19.79■□□□□ 0.76
UFC1-201ENST00000368003 TOP2BQ02880 1626 aa19.76■□□□□ 0.75
UFC1-201ENST00000368003 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
UFC1-201ENST00000368003 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
UFC1-201ENST00000368003 CUX1P39880 1505 aa19.71■□□□□ 0.75
UFC1-201ENST00000368003 CEP164Q9UPV0 1460 aa19.7■□□□□ 0.74
UFC1-201ENST00000368003 KIF21AQ7Z4S6 1674 aa19.65■□□□□ 0.74
UFC1-201ENST00000368003 FAM9AQ8IZU1 332 aaPredicted RBP19.63■□□□□ 0.73
UFC1-201ENST00000368003 DNMBPQ6XZF7 1577 aa19.61■□□□□ 0.73
UFC1-201ENST00000368003 EEA1Q15075 1411 aa19.59■□□□□ 0.73
UFC1-201ENST00000368003 SOGA1O94964 1423 aa19.58■□□□□ 0.72
UFC1-201ENST00000368003 TOPBP1Q92547 1522 aa19.56■□□□□ 0.72
UFC1-201ENST00000368003 URB2Q14146 1524 aaKnown RBP19.54■□□□□ 0.72
UFC1-201ENST00000368003 FGD5Q6ZNL6 1462 aa19.54■□□□□ 0.72
UFC1-201ENST00000368003 RUSC2Q8N2Y8 1516 aa19.51■□□□□ 0.71
UFC1-201ENST00000368003 MRC2Q9UBG0 1479 aa19.5■□□□□ 0.71
UFC1-201ENST00000368003 ERCC6Q03468 1493 aa19.49■□□□□ 0.71
UFC1-201ENST00000368003 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
UFC1-201ENST00000368003 CSRNP3Q8WYN3 585 aa19.47■□□□□ 0.71
UFC1-201ENST00000368003 POLA1P09884 1462 aaPredicted RBP19.45■□□□□ 0.7
UFC1-201ENST00000368003 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
UFC1-201ENST00000368003 CUX2O14529 1486 aa19.39■□□□□ 0.69
UFC1-201ENST00000368003 WDR62O43379 1518 aa19.39■□□□□ 0.69
UFC1-201ENST00000368003 RAD54L2Q9Y4B4 1467 aa19.38■□□□□ 0.69
UFC1-201ENST00000368003 ABCA10Q8WWZ4 1543 aa19.36■□□□□ 0.69
UFC1-201ENST00000368003 THOC2Q8NI27 1593 aaKnown RBP19.35■□□□□ 0.69
UFC1-201ENST00000368003 EHMT2Q96KQ7 1210 aa19.34■□□□□ 0.69
UFC1-201ENST00000368003 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
UFC1-201ENST00000368003 WDR97A6NE52 1622 aa19.31■□□□□ 0.68
UFC1-201ENST00000368003 KIF21BO75037 1637 aa19.31■□□□□ 0.68
UFC1-201ENST00000368003 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
UFC1-201ENST00000368003 TARBP1Q13395 1621 aaKnown RBP19.28■□□□□ 0.68
UFC1-201ENST00000368003 IFT140Q96RY7 1462 aa19.25■□□□□ 0.67
UFC1-201ENST00000368003 IGF1RP08069 1367 aa19.24■□□□□ 0.67
UFC1-201ENST00000368003 PRXQ9BXM0 1461 aa19.23■□□□□ 0.67
UFC1-201ENST00000368003 UBTFP17480 764 aaKnown RBP19.22■□□□□ 0.67
UFC1-201ENST00000368003 ABCA5Q8WWZ7 1642 aa19.21■□□□□ 0.67
UFC1-201ENST00000368003 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
UFC1-201ENST00000368003 TDRD9Q8NDG6 1382 aaKnown RBP19.2■□□□□ 0.66
UFC1-201ENST00000368003 TNIKQ9UKE5 1360 aa19.19■□□□□ 0.66
UFC1-201ENST00000368003 GAPVD1Q14C86 1478 aa19.19■□□□□ 0.66
UFC1-201ENST00000368003 RAPGEF2Q9Y4G8 1499 aa19.19■□□□□ 0.66
UFC1-201ENST00000368003 CARMIL1Q5VZK9 1371 aa19.17■□□□□ 0.66
UFC1-201ENST00000368003 CUL7Q14999 1698 aa19.14■□□□□ 0.66
UFC1-201ENST00000368003 PHF23Q9BUL5 403 aaPredicted RBP19.13■□□□□ 0.65
UFC1-201ENST00000368003 AQRO60306 1485 aaKnown RBP eCLIP19.11■□□□□ 0.65
UFC1-201ENST00000368003 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
UFC1-201ENST00000368003 ZNF608Q9ULD9 1512 aaPredicted RBP19.09■□□□□ 0.65
UFC1-201ENST00000368003 GRIN2BQ13224 1484 aa19.07■□□□□ 0.64
UFC1-201ENST00000368003 CEP162Q5TB80 1403 aa19.06■□□□□ 0.64
UFC1-201ENST00000368003 EIF4G3O43432 1585 aaKnown RBP19.05■□□□□ 0.64
UFC1-201ENST00000368003 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
UFC1-201ENST00000368003 ADAMTS12P58397 1594 aa18.98■□□□□ 0.63
UFC1-201ENST00000368003 CLIP1P30622 1438 aa18.96■□□□□ 0.63
UFC1-201ENST00000368003 SNAPC4Q5SXM2 1469 aa18.95■□□□□ 0.62
UFC1-201ENST00000368003 MAGI1Q96QZ7 1491 aaPredicted RBP18.92■□□□□ 0.62
UFC1-201ENST00000368003 CTTNBP2Q8WZ74 1663 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms