RNA–Protein interactions for RNA: ENST00000367441.1

TROVE2-201, Transcript of TROVE domain family member 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROVE2, Length 1,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2-201ENST00000367441 NISCHQ9Y2I1 1504 aa17.91■□□□□ 0.46
TROVE2-201ENST00000367441 CCDC180Q9P1Z9 1646 aa15.79■□□□□ 0.12
TROVE2-201ENST00000367441 ABCC9O60706 1549 aa15.16■□□□□ 0.02
TROVE2-201ENST00000367441 ZCCHC6Q5VYS8 1495 aaKnown RBP15.01□□□□□ -0.01
TROVE2-201ENST00000367441 DCAF8L2P0C7V8 631 aa14.91□□□□□ -0.02
TROVE2-201ENST00000367441 DCAF1Q9Y4B6 1507 aa14.8□□□□□ -0.04
TROVE2-201ENST00000367441 NACADO15069 1562 aa14.74□□□□□ -0.05
TROVE2-201ENST00000367441 MYO15BQ96JP2 1530 aa14.72□□□□□ -0.05
TROVE2-201ENST00000367441 RB1CC1Q8TDY2 1594 aa14.7□□□□□ -0.06
TROVE2-201ENST00000367441 SCRIBQ14160 1630 aa14.51□□□□□ -0.09
TROVE2-201ENST00000367441 SHROOM4Q9ULL8 1493 aa14.47□□□□□ -0.09
TROVE2-201ENST00000367441 UNC13AQ9UPW8 1703 aa14.43□□□□□ -0.1
TROVE2-201ENST00000367441 BICRAQ9NZM4 1560 aa14.23□□□□□ -0.13
TROVE2-201ENST00000367441 PABPN1Q86U42 306 aaKnown RBP eCLIP14.22□□□□□ -0.13
TROVE2-201ENST00000367441 CECR2Q9BXF3 1484 aa13.94□□□□□ -0.18
TROVE2-201ENST00000367441 BAZ1AQ9NRL2 1556 aaPredicted RBP13.88□□□□□ -0.19
TROVE2-201ENST00000367441 SMARCA4P51532 1647 aa13.86□□□□□ -0.19
TROVE2-201ENST00000367441 EIF4G1Q04637 1599 aaKnown RBP13.86□□□□□ -0.19
TROVE2-201ENST00000367441 MROH2BQ7Z745 1585 aa13.84□□□□□ -0.19
TROVE2-201ENST00000367441 RSF1Q96T23 1441 aaPredicted RBP13.78□□□□□ -0.2
TROVE2-201ENST00000367441 SUPT5HO00267 1087 aaKnown RBP13.77□□□□□ -0.21
TROVE2-201ENST00000367441 WIZO95785 1651 aa13.74□□□□□ -0.21
TROVE2-201ENST00000367441 CC2D2AQ9P2K1 1620 aa13.72□□□□□ -0.21
TROVE2-201ENST00000367441 SMARCA2P51531 1590 aa13.68□□□□□ -0.22
TROVE2-201ENST00000367441 PEG3Q9GZU2 1588 aa13.68□□□□□ -0.22
TROVE2-201ENST00000367441 ATAD2BQ9ULI0 1458 aa13.67□□□□□ -0.22
TROVE2-201ENST00000367441 BAZ1BQ9UIG0 1483 aaKnown RBP13.61□□□□□ -0.23
TROVE2-201ENST00000367441 TOP2AP11388 1531 aaKnown RBP13.58□□□□□ -0.24
TROVE2-201ENST00000367441 NCAPD3P42695 1498 aa13.57□□□□□ -0.24
TROVE2-201ENST00000367441 HMGXB3Q12766 1538 aa13.57□□□□□ -0.24
TROVE2-201ENST00000367441 DNAJC5BQ9UF47 199 aa13.55□□□□□ -0.24
TROVE2-201ENST00000367441 CCDC88BA6NC98 1476 aa13.41□□□□□ -0.26
TROVE2-201ENST00000367441 NESP48681 1621 aa13.22□□□□□ -0.29
TROVE2-201ENST00000367441 CADPSQ9ULU8 1353 aa13.22□□□□□ -0.29
TROVE2-201ENST00000367441 CFTRP13569 1480 aa13.21□□□□□ -0.29
TROVE2-201ENST00000367441 PRDM2Q13029 1718 aa13.21□□□□□ -0.29
TROVE2-201ENST00000367441 LAMC3Q9Y6N6 1575 aa13.21□□□□□ -0.3
TROVE2-201ENST00000367441 AEBP2Q6ZN18 517 aaPredicted RBP13.17□□□□□ -0.3
TROVE2-201ENST00000367441 FANCD2Q9BXW9 1451 aa13.1□□□□□ -0.31
TROVE2-201ENST00000367441 KIF21AQ7Z4S6 1674 aa13.1□□□□□ -0.31
TROVE2-201ENST00000367441 PDS5BQ9NTI5 1447 aa13.1□□□□□ -0.31
TROVE2-201ENST00000367441 ABCC8Q09428 1581 aa13.09□□□□□ -0.31
TROVE2-201ENST00000367441 ERCC6Q03468 1493 aa13.06□□□□□ -0.32
TROVE2-201ENST00000367441 CEP164Q9UPV0 1460 aa13.06□□□□□ -0.32
TROVE2-201ENST00000367441 WRNQ14191 1432 aaPredicted RBP eCLIP13.01□□□□□ -0.33
TROVE2-201ENST00000367441 CHIC1Q5VXU3 224 aa12.99□□□□□ -0.33
TROVE2-201ENST00000367441 SYNJ1O43426 1573 aa12.98□□□□□ -0.33
TROVE2-201ENST00000367441 CUX1P39880 1505 aa12.96□□□□□ -0.33
TROVE2-201ENST00000367441 TRIM41Q8WV44 630 aa12.96□□□□□ -0.34
TROVE2-201ENST00000367441 MRC2Q9UBG0 1479 aa12.95□□□□□ -0.34
TROVE2-201ENST00000367441 URB2Q14146 1524 aaKnown RBP12.95□□□□□ -0.34
TROVE2-201ENST00000367441 TOP2BQ02880 1626 aa12.95□□□□□ -0.34
TROVE2-201ENST00000367441 DNMBPQ6XZF7 1577 aa12.94□□□□□ -0.34
TROVE2-201ENST00000367441 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
TROVE2-201ENST00000367441 THOC2Q8NI27 1593 aaKnown RBP12.93□□□□□ -0.34
TROVE2-201ENST00000367441 TOPBP1Q92547 1522 aa12.93□□□□□ -0.34
TROVE2-201ENST00000367441 WDR62O43379 1518 aa12.9□□□□□ -0.34
TROVE2-201ENST00000367441 SLC24A1O60721 1099 aa12.89□□□□□ -0.35
TROVE2-201ENST00000367441 FGD5Q6ZNL6 1462 aa12.88□□□□□ -0.35
TROVE2-201ENST00000367441 POLA1P09884 1462 aaPredicted RBP12.85□□□□□ -0.35
TROVE2-201ENST00000367441 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
TROVE2-201ENST00000367441 SOGA1O94964 1423 aa12.78□□□□□ -0.36
TROVE2-201ENST00000367441 CUX2O14529 1486 aa12.77□□□□□ -0.36
TROVE2-201ENST00000367441 TARBP1Q13395 1621 aaKnown RBP12.76□□□□□ -0.37
TROVE2-201ENST00000367441 WDR97A6NE52 1622 aa12.75□□□□□ -0.37
TROVE2-201ENST00000367441 IFT140Q96RY7 1462 aa12.75□□□□□ -0.37
TROVE2-201ENST00000367441 ABCA10Q8WWZ4 1543 aa12.74□□□□□ -0.37
TROVE2-201ENST00000367441 FAM9AQ8IZU1 332 aaPredicted RBP12.73□□□□□ -0.37
TROVE2-201ENST00000367441 RUSC2Q8N2Y8 1516 aa12.71□□□□□ -0.37
TROVE2-201ENST00000367441 KIF27Q86VH2 1401 aa12.7□□□□□ -0.38
TROVE2-201ENST00000367441 TDRD9Q8NDG6 1382 aaKnown RBP12.7□□□□□ -0.38
TROVE2-201ENST00000367441 ZNF608Q9ULD9 1512 aaPredicted RBP12.69□□□□□ -0.38
TROVE2-201ENST00000367441 ABCA5Q8WWZ7 1642 aa12.69□□□□□ -0.38
TROVE2-201ENST00000367441 EIF4G3O43432 1585 aaKnown RBP12.68□□□□□ -0.38
TROVE2-201ENST00000367441 EEA1Q15075 1411 aa12.66□□□□□ -0.38
TROVE2-201ENST00000367441 AQRO60306 1485 aaKnown RBP eCLIP12.66□□□□□ -0.38
TROVE2-201ENST00000367441 GAPVD1Q14C86 1478 aa12.65□□□□□ -0.38
TROVE2-201ENST00000367441 PBRM1Q86U86 1689 aa12.65□□□□□ -0.38
TROVE2-201ENST00000367441 CSRNP3Q8WYN3 585 aa12.6□□□□□ -0.39
TROVE2-201ENST00000367441 ERICH3Q5RHP9 1530 aa12.59□□□□□ -0.39
TROVE2-201ENST00000367441 GRIN2BQ13224 1484 aa12.59□□□□□ -0.39
TROVE2-201ENST00000367441 EHMT2Q96KQ7 1210 aa12.59□□□□□ -0.39
TROVE2-201ENST00000367441 CUL7Q14999 1698 aa12.58□□□□□ -0.4
TROVE2-201ENST00000367441 IGF1RP08069 1367 aa12.58□□□□□ -0.4
TROVE2-201ENST00000367441 SNAPC4Q5SXM2 1469 aa12.56□□□□□ -0.4
TROVE2-201ENST00000367441 ADAMTS12P58397 1594 aa12.55□□□□□ -0.4
TROVE2-201ENST00000367441 KIF21BO75037 1637 aa12.54□□□□□ -0.4
TROVE2-201ENST00000367441 CARMIL1Q5VZK9 1371 aa12.53□□□□□ -0.4
TROVE2-201ENST00000367441 MAGI1Q96QZ7 1491 aaPredicted RBP12.52□□□□□ -0.4
TROVE2-201ENST00000367441 PRXQ9BXM0 1461 aa12.52□□□□□ -0.4
TROVE2-201ENST00000367441 RAPGEF2Q9Y4G8 1499 aa12.52□□□□□ -0.41
TROVE2-201ENST00000367441 FHAD1B1AJZ9 1412 aa12.5□□□□□ -0.41
TROVE2-201ENST00000367441 GOLGA3Q08378 1498 aa12.5□□□□□ -0.41
TROVE2-201ENST00000367441 LOC105371045A0A1W2PR82 267 aa12.5□□□□□ -0.41
TROVE2-201ENST00000367441 FBLN2P98095 1184 aa12.48□□□□□ -0.41
TROVE2-201ENST00000367441 SYNJ2O15056 1496 aa12.48□□□□□ -0.41
TROVE2-201ENST00000367441 CHD1O14646 1710 aa12.47□□□□□ -0.41
TROVE2-201ENST00000367441 UBTFP17480 764 aaKnown RBP12.46□□□□□ -0.42
TROVE2-201ENST00000367441 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.42
TROVE2-201ENST00000367441 GRIN2AQ12879 1464 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms