RNA–Protein interactions for RNA: ENST00000366876.6

T-203, Transcript of Brachyury protein, humanhuman

TSL 1 (best)

Gene T, Length 1,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
T-203ENST00000366876 NISCHQ9Y2I1 1504 aa46.25■■■■■ 4.99
T-203ENST00000366876 CCDC180Q9P1Z9 1646 aa40.8■■■■■ 4.12
T-203ENST00000366876 ABCC9O60706 1549 aa39.78■■■■□ 3.96
T-203ENST00000366876 DCAF8L2P0C7V8 631 aa38.88■■■■□ 3.81
T-203ENST00000366876 ZCCHC6Q5VYS8 1495 aaKnown RBP38.56■■■■□ 3.76
T-203ENST00000366876 NACADO15069 1562 aa38.42■■■■□ 3.74
T-203ENST00000366876 RB1CC1Q8TDY2 1594 aa38.37■■■■□ 3.73
T-203ENST00000366876 MYO15BQ96JP2 1530 aa38.3■■■■□ 3.72
T-203ENST00000366876 DCAF1Q9Y4B6 1507 aa38.26■■■■□ 3.72
T-203ENST00000366876 DNAJC5BQ9UF47 199 aa37.39■■■■□ 3.58
T-203ENST00000366876 PABPN1Q86U42 306 aaKnown RBP eCLIP37.35■■■■□ 3.57
T-203ENST00000366876 SCRIBQ14160 1630 aa37.34■■■■□ 3.57
T-203ENST00000366876 UNC13AQ9UPW8 1703 aa37.18■■■■□ 3.54
T-203ENST00000366876 BICRAQ9NZM4 1560 aa37.05■■■■□ 3.52
T-203ENST00000366876 SHROOM4Q9ULL8 1493 aa36.93■■■■□ 3.5
T-203ENST00000366876 EIF4G1Q04637 1599 aaKnown RBP36.13■■■■□ 3.37
T-203ENST00000366876 CECR2Q9BXF3 1484 aa35.99■■■■□ 3.35
T-203ENST00000366876 CC2D2AQ9P2K1 1620 aa35.94■■■■□ 3.34
T-203ENST00000366876 BAZ1AQ9NRL2 1556 aaPredicted RBP35.84■■■■□ 3.33
T-203ENST00000366876 SMARCA4P51532 1647 aa35.73■■■■□ 3.31
T-203ENST00000366876 MROH2BQ7Z745 1585 aa35.63■■■■□ 3.29
T-203ENST00000366876 ATAD2BQ9ULI0 1458 aa35.54■■■■□ 3.28
T-203ENST00000366876 SMARCA2P51531 1590 aa35.53■■■■□ 3.28
T-203ENST00000366876 NCAPD3P42695 1498 aa35.5■■■■□ 3.27
T-203ENST00000366876 RSF1Q96T23 1441 aaPredicted RBP35.45■■■■□ 3.26
T-203ENST00000366876 PEG3Q9GZU2 1588 aa35.36■■■■□ 3.25
T-203ENST00000366876 BAZ1BQ9UIG0 1483 aaKnown RBP35.32■■■■□ 3.24
T-203ENST00000366876 HMGXB3Q12766 1538 aa35.26■■■■□ 3.24
T-203ENST00000366876 WIZO95785 1651 aa35.2■■■■□ 3.22
T-203ENST00000366876 SUPT5HO00267 1087 aaKnown RBP35.08■■■■□ 3.21
T-203ENST00000366876 TOP2AP11388 1531 aaKnown RBP34.91■■■■□ 3.18
T-203ENST00000366876 CCDC88BA6NC98 1476 aa34.57■■■■□ 3.13
T-203ENST00000366876 CADPSQ9ULU8 1353 aa34.56■■■■□ 3.12
T-203ENST00000366876 NESP48681 1621 aa34.45■■■■□ 3.11
T-203ENST00000366876 LAMC3Q9Y6N6 1575 aa34.43■■■■□ 3.1
T-203ENST00000366876 PDS5BQ9NTI5 1447 aa34.36■■■■□ 3.09
T-203ENST00000366876 DNAJC5Q9H3Z4 198 aa34.35■■■■□ 3.09
T-203ENST00000366876 CFTRP13569 1480 aa34.35■■■■□ 3.09
T-203ENST00000366876 ERCC6Q03468 1493 aa34.34■■■■□ 3.09
T-203ENST00000366876 CUX2O14529 1486 aa34.31■■■■□ 3.08
T-203ENST00000366876 FANCD2Q9BXW9 1451 aa34.09■■■■□ 3.05
T-203ENST00000366876 CEP164Q9UPV0 1460 aa34.01■■■■□ 3.04
T-203ENST00000366876 KIF21AQ7Z4S6 1674 aa33.9■■■■□ 3.02
T-203ENST00000366876 MRC2Q9UBG0 1479 aa33.86■■■■□ 3.01
T-203ENST00000366876 THOC2Q8NI27 1593 aaKnown RBP33.83■■■■□ 3.01
T-203ENST00000366876 PRDM2Q13029 1718 aa33.82■■■■□ 3.01
T-203ENST00000366876 ABCC8Q09428 1581 aa33.68■■■□□ 2.98
T-203ENST00000366876 WDR62O43379 1518 aa33.64■■■□□ 2.98
T-203ENST00000366876 URB2Q14146 1524 aaKnown RBP33.64■■■□□ 2.98
T-203ENST00000366876 TOPBP1Q92547 1522 aa33.54■■■□□ 2.96
T-203ENST00000366876 DNMBPQ6XZF7 1577 aa33.5■■■□□ 2.95
T-203ENST00000366876 WRNQ14191 1432 aaPredicted RBP eCLIP33.46■■■□□ 2.95
T-203ENST00000366876 CUX1P39880 1505 aa33.39■■■□□ 2.94
T-203ENST00000366876 IFT140Q96RY7 1462 aa33.3■■■□□ 2.92
T-203ENST00000366876 SOGA1O94964 1423 aa33.3■■■□□ 2.92
T-203ENST00000366876 POLA1P09884 1462 aaPredicted RBP33.29■■■□□ 2.92
T-203ENST00000366876 FGD5Q6ZNL6 1462 aa33.27■■■□□ 2.92
T-203ENST00000366876 TOP2BQ02880 1626 aa33.19■■■□□ 2.9
T-203ENST00000366876 RAD54L2Q9Y4B4 1467 aa33.17■■■□□ 2.9
T-203ENST00000366876 SYNJ1O43426 1573 aa33.16■■■□□ 2.9
T-203ENST00000366876 TRIM41Q8WV44 630 aa33.15■■■□□ 2.9
T-203ENST00000366876 BIVM-ERCC5R4GMW8 1640 aa33.12■■■□□ 2.89
T-203ENST00000366876 TDRD9Q8NDG6 1382 aaKnown RBP33.05■■■□□ 2.88
T-203ENST00000366876 TARBP1Q13395 1621 aaKnown RBP33.04■■■□□ 2.88
T-203ENST00000366876 ZNF608Q9ULD9 1512 aaPredicted RBP33.03■■■□□ 2.88
T-203ENST00000366876 AQRO60306 1485 aaKnown RBP eCLIP33■■■□□ 2.87
T-203ENST00000366876 ABCA10Q8WWZ4 1543 aa32.97■■■□□ 2.87
T-203ENST00000366876 CHIC1Q5VXU3 224 aa32.89■■■□□ 2.86
T-203ENST00000366876 GAPVD1Q14C86 1478 aa32.86■■■□□ 2.85
T-203ENST00000366876 WDR97A6NE52 1622 aa32.85■■■□□ 2.85
T-203ENST00000366876 EIF4G3O43432 1585 aaKnown RBP32.83■■■□□ 2.85
T-203ENST00000366876 GRIN2BQ13224 1484 aa32.8■■■□□ 2.84
T-203ENST00000366876 KIF27Q86VH2 1401 aa32.79■■■□□ 2.84
T-203ENST00000366876 FBLN2P98095 1184 aa32.74■■■□□ 2.83
T-203ENST00000366876 OSCARQ8IYS5 282 aa32.74■■■□□ 2.83
T-203ENST00000366876 CHMP7Q8WUX9 453 aaPredicted RBP32.7■■■□□ 2.83
T-203ENST00000366876 ABCA5Q8WWZ7 1642 aa32.66■■■□□ 2.82
T-203ENST00000366876 SNAPC4Q5SXM2 1469 aa32.65■■■□□ 2.82
T-203ENST00000366876 MAGI1Q96QZ7 1491 aaPredicted RBP32.64■■■□□ 2.82
T-203ENST00000366876 ERICH3Q5RHP9 1530 aa32.59■■■□□ 2.81
T-203ENST00000366876 IGF1RP08069 1367 aa32.58■■■□□ 2.81
T-203ENST00000366876 SYNJ2O15056 1496 aa32.52■■■□□ 2.8
T-203ENST00000366876 FHAD1B1AJZ9 1412 aa32.51■■■□□ 2.8
T-203ENST00000366876 PBRM1Q86U86 1689 aa32.51■■■□□ 2.8
T-203ENST00000366876 RUSC2Q8N2Y8 1516 aa32.46■■■□□ 2.79
T-203ENST00000366876 CARMIL1Q5VZK9 1371 aa32.45■■■□□ 2.78
T-203ENST00000366876 FAM9AQ8IZU1 332 aaPredicted RBP32.42■■■□□ 2.78
T-203ENST00000366876 CSRNP3Q8WYN3 585 aa32.42■■■□□ 2.78
T-203ENST00000366876 EEA1Q15075 1411 aa32.41■■■□□ 2.78
T-203ENST00000366876 ADAMTS12P58397 1594 aa32.35■■■□□ 2.77
T-203ENST00000366876 GRIN2AQ12879 1464 aa32.32■■■□□ 2.77
T-203ENST00000366876 RIMBP3CA6NJZ7 1639 aa32.31■■■□□ 2.76
T-203ENST00000366876 RIMBP3BA6NNM3 1639 aa32.31■■■□□ 2.76
T-203ENST00000366876 RIMBP3Q9UFD9 1639 aa32.31■■■□□ 2.76
T-203ENST00000366876 CUL7Q14999 1698 aa32.29■■■□□ 2.76
T-203ENST00000366876 CHD1O14646 1710 aa32.28■■■□□ 2.76
T-203ENST00000366876 RAPGEF2Q9Y4G8 1499 aa32.23■■■□□ 2.75
T-203ENST00000366876 ARHGEF11O15085 1522 aa32.22■■■□□ 2.75
T-203ENST00000366876 NUP160Q12769 1436 aa32.16■■■□□ 2.74
T-203ENST00000366876 PRXQ9BXM0 1461 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms