RNA–Protein interactions for RNA: ENST00000366838.1

SRP9-202, Transcript of signal recognition particle 9, humanhuman

TSL 2 BASIC

Gene SRP9, Length 540 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9-202ENST00000366838 NISCHQ9Y2I1 1504 aa27.11■■□□□ 1.93
SRP9-202ENST00000366838 CCDC180Q9P1Z9 1646 aa24■■□□□ 1.43
SRP9-202ENST00000366838 ABCC9O60706 1549 aa23.09■■□□□ 1.29
SRP9-202ENST00000366838 ZCCHC6Q5VYS8 1495 aaKnown RBP22.62■■□□□ 1.21
SRP9-202ENST00000366838 DCAF8L2P0C7V8 631 aa22.53■■□□□ 1.2
SRP9-202ENST00000366838 NACADO15069 1562 aa22.48■■□□□ 1.19
SRP9-202ENST00000366838 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
SRP9-202ENST00000366838 MYO15BQ96JP2 1530 aa22.46■■□□□ 1.19
SRP9-202ENST00000366838 RB1CC1Q8TDY2 1594 aa22.42■■□□□ 1.18
SRP9-202ENST00000366838 UNC13AQ9UPW8 1703 aa21.92■■□□□ 1.1
SRP9-202ENST00000366838 SCRIBQ14160 1630 aa21.86■■□□□ 1.09
SRP9-202ENST00000366838 BICRAQ9NZM4 1560 aa21.68■■□□□ 1.06
SRP9-202ENST00000366838 PABPN1Q86U42 306 aaKnown RBP eCLIP21.63■■□□□ 1.05
SRP9-202ENST00000366838 SHROOM4Q9ULL8 1493 aa21.56■■□□□ 1.04
SRP9-202ENST00000366838 EIF4G1Q04637 1599 aaKnown RBP21.09■□□□□ 0.97
SRP9-202ENST00000366838 CECR2Q9BXF3 1484 aa21.03■□□□□ 0.96
SRP9-202ENST00000366838 BAZ1AQ9NRL2 1556 aaPredicted RBP21.01■□□□□ 0.95
SRP9-202ENST00000366838 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
SRP9-202ENST00000366838 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
SRP9-202ENST00000366838 DNAJC5BQ9UF47 199 aa20.87■□□□□ 0.93
SRP9-202ENST00000366838 MROH2BQ7Z745 1585 aa20.87■□□□□ 0.93
SRP9-202ENST00000366838 SMARCA2P51531 1590 aa20.79■□□□□ 0.92
SRP9-202ENST00000366838 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
SRP9-202ENST00000366838 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
SRP9-202ENST00000366838 ATAD2BQ9ULI0 1458 aa20.75■□□□□ 0.91
SRP9-202ENST00000366838 NCAPD3P42695 1498 aa20.72■□□□□ 0.91
SRP9-202ENST00000366838 WIZO95785 1651 aa20.68■□□□□ 0.9
SRP9-202ENST00000366838 HMGXB3Q12766 1538 aa20.64■□□□□ 0.9
SRP9-202ENST00000366838 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
SRP9-202ENST00000366838 SUPT5HO00267 1087 aaKnown RBP20.5■□□□□ 0.87
SRP9-202ENST00000366838 TOP2AP11388 1531 aaKnown RBP20.48■□□□□ 0.87
SRP9-202ENST00000366838 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
SRP9-202ENST00000366838 LAMC3Q9Y6N6 1575 aa20.14■□□□□ 0.81
SRP9-202ENST00000366838 CADPSQ9ULU8 1353 aa20.13■□□□□ 0.81
SRP9-202ENST00000366838 CFTRP13569 1480 aa20.07■□□□□ 0.8
SRP9-202ENST00000366838 NESP48681 1621 aa20.07■□□□□ 0.8
SRP9-202ENST00000366838 PRDM2Q13029 1718 aa20.02■□□□□ 0.8
SRP9-202ENST00000366838 PDS5BQ9NTI5 1447 aa20■□□□□ 0.79
SRP9-202ENST00000366838 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
SRP9-202ENST00000366838 KIF21AQ7Z4S6 1674 aa19.89■□□□□ 0.77
SRP9-202ENST00000366838 FANCD2Q9BXW9 1451 aa19.88■□□□□ 0.77
SRP9-202ENST00000366838 CEP164Q9UPV0 1460 aa19.84■□□□□ 0.77
SRP9-202ENST00000366838 MRC2Q9UBG0 1479 aa19.73■□□□□ 0.75
SRP9-202ENST00000366838 THOC2Q8NI27 1593 aaKnown RBP19.71■□□□□ 0.75
SRP9-202ENST00000366838 ABCC8Q09428 1581 aa19.7■□□□□ 0.74
SRP9-202ENST00000366838 WDR62O43379 1518 aa19.65■□□□□ 0.74
SRP9-202ENST00000366838 URB2Q14146 1524 aaKnown RBP19.65■□□□□ 0.74
SRP9-202ENST00000366838 DNMBPQ6XZF7 1577 aa19.62■□□□□ 0.73
SRP9-202ENST00000366838 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
SRP9-202ENST00000366838 CUX2O14529 1486 aa19.6■□□□□ 0.73
SRP9-202ENST00000366838 WRNQ14191 1432 aaPredicted RBP eCLIP19.58■□□□□ 0.72
SRP9-202ENST00000366838 CUX1P39880 1505 aa19.56■□□□□ 0.72
SRP9-202ENST00000366838 BIVM-ERCC5R4GMW8 1640 aa19.52■□□□□ 0.72
SRP9-202ENST00000366838 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
SRP9-202ENST00000366838 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
SRP9-202ENST00000366838 POLA1P09884 1462 aaPredicted RBP19.45■□□□□ 0.7
SRP9-202ENST00000366838 FGD5Q6ZNL6 1462 aa19.45■□□□□ 0.7
SRP9-202ENST00000366838 IFT140Q96RY7 1462 aa19.41■□□□□ 0.7
SRP9-202ENST00000366838 SOGA1O94964 1423 aa19.41■□□□□ 0.7
SRP9-202ENST00000366838 TRIM41Q8WV44 630 aa19.38■□□□□ 0.69
SRP9-202ENST00000366838 TARBP1Q13395 1621 aaKnown RBP19.37■□□□□ 0.69
SRP9-202ENST00000366838 RAD54L2Q9Y4B4 1467 aa19.35■□□□□ 0.69
SRP9-202ENST00000366838 CHIC1Q5VXU3 224 aa19.33■□□□□ 0.68
SRP9-202ENST00000366838 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
SRP9-202ENST00000366838 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
SRP9-202ENST00000366838 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
SRP9-202ENST00000366838 TDRD9Q8NDG6 1382 aaKnown RBP19.22■□□□□ 0.67
SRP9-202ENST00000366838 EIF4G3O43432 1585 aaKnown RBP19.21■□□□□ 0.67
SRP9-202ENST00000366838 AQRO60306 1485 aaKnown RBP eCLIP19.2■□□□□ 0.665e-11■□□□□ 10.8
SRP9-202ENST00000366838 GAPVD1Q14C86 1478 aa19.19■□□□□ 0.66
SRP9-202ENST00000366838 ABCA5Q8WWZ7 1642 aa19.18■□□□□ 0.66
SRP9-202ENST00000366838 KIF27Q86VH2 1401 aa19.17■□□□□ 0.66
SRP9-202ENST00000366838 GRIN2BQ13224 1484 aa19.14■□□□□ 0.65
SRP9-202ENST00000366838 PBRM1Q86U86 1689 aa19.14■□□□□ 0.65
SRP9-202ENST00000366838 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
SRP9-202ENST00000366838 MAGI1Q96QZ7 1491 aaPredicted RBP19.06■□□□□ 0.64
SRP9-202ENST00000366838 EEA1Q15075 1411 aa19.05■□□□□ 0.64
SRP9-202ENST00000366838 RUSC2Q8N2Y8 1516 aa19.03■□□□□ 0.64
SRP9-202ENST00000366838 IGF1RP08069 1367 aa19.03■□□□□ 0.64
SRP9-202ENST00000366838 SNAPC4Q5SXM2 1469 aa19.03■□□□□ 0.64
SRP9-202ENST00000366838 CUL7Q14999 1698 aa19■□□□□ 0.63
SRP9-202ENST00000366838 FHAD1B1AJZ9 1412 aa18.98■□□□□ 0.63
SRP9-202ENST00000366838 ADAMTS12P58397 1594 aa18.97■□□□□ 0.63
SRP9-202ENST00000366838 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
SRP9-202ENST00000366838 CHMP7Q8WUX9 453 aaPredicted RBP18.96■□□□□ 0.63
SRP9-202ENST00000366838 CSRNP3Q8WYN3 585 aa18.96■□□□□ 0.63
SRP9-202ENST00000366838 FBLN2P98095 1184 aa18.95■□□□□ 0.62
SRP9-202ENST00000366838 CARMIL1Q5VZK9 1371 aa18.94■□□□□ 0.62
SRP9-202ENST00000366838 CHD1O14646 1710 aa18.94■□□□□ 0.62
SRP9-202ENST00000366838 FAM9AQ8IZU1 332 aaPredicted RBP18.92■□□□□ 0.62
SRP9-202ENST00000366838 GRIN2AQ12879 1464 aa18.88■□□□□ 0.61
SRP9-202ENST00000366838 OSCARQ8IYS5 282 aa18.87■□□□□ 0.61
SRP9-202ENST00000366838 RAPGEF2Q9Y4G8 1499 aa18.86■□□□□ 0.61
SRP9-202ENST00000366838 PRXQ9BXM0 1461 aa18.85■□□□□ 0.61
SRP9-202ENST00000366838 KIF21BO75037 1637 aa18.79■□□□□ 0.6
SRP9-202ENST00000366838 NUP160Q12769 1436 aa18.77■□□□□ 0.6
SRP9-202ENST00000366838 CEP170Q5SW79 1584 aa18.75■□□□□ 0.59
SRP9-202ENST00000366838 CLASP1Q7Z460 1538 aa18.71■□□□□ 0.59
SRP9-202ENST00000366838 KIAA0586Q9BVV6 1533 aa18.7■□□□□ 0.58
SRP9-202ENST00000366838 GOLGA3Q08378 1498 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms