RNA–Protein interactions for RNA: ENST00000366334.3

C2CD3-203, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-203ENST00000366334 NISCHQ9Y2I1 1504 aa17.95■□□□□ 0.46
C2CD3-203ENST00000366334 AEBP2Q6ZN18 517 aaPredicted RBP17.44■□□□□ 0.38
C2CD3-203ENST00000366334 CHIC1Q5VXU3 224 aa16.4■□□□□ 0.22
C2CD3-203ENST00000366334 CCDC180Q9P1Z9 1646 aa15.77■□□□□ 0.12
C2CD3-203ENST00000366334 POTEDQ86YR6 584 aa15.27■□□□□ 0.04
C2CD3-203ENST00000366334 SENP3Q9H4L4 574 aaPredicted RBP15.17■□□□□ 0.02
C2CD3-203ENST00000366334 ZCCHC6Q5VYS8 1495 aaKnown RBP15.16■□□□□ 0.02
C2CD3-203ENST00000366334 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
C2CD3-203ENST00000366334 PHF23Q9BUL5 403 aaPredicted RBP14.76□□□□□ -0.05
C2CD3-203ENST00000366334 SHROOM4Q9ULL8 1493 aa14.68□□□□□ -0.06
C2CD3-203ENST00000366334 MYO15BQ96JP2 1530 aa14.65□□□□□ -0.06
C2CD3-203ENST00000366334 DCAF8L2P0C7V8 631 aa14.56□□□□□ -0.08
C2CD3-203ENST00000366334 NACADO15069 1562 aa14.51□□□□□ -0.09
C2CD3-203ENST00000366334 ABCC9O60706 1549 aa14.43□□□□□ -0.1
C2CD3-203ENST00000366334 SCRIBQ14160 1630 aa14.39□□□□□ -0.11
C2CD3-203ENST00000366334 RB1CC1Q8TDY2 1594 aa14.36□□□□□ -0.11
C2CD3-203ENST00000366334 SUPT5HO00267 1087 aaKnown RBP14.22□□□□□ -0.13
C2CD3-203ENST00000366334 FOXD1Q16676 465 aa14.19□□□□□ -0.14
C2CD3-203ENST00000366334 UNC13AQ9UPW8 1703 aa14.17□□□□□ -0.14
C2CD3-203ENST00000366334 RSF1Q96T23 1441 aaPredicted RBP13.93□□□□□ -0.18
C2CD3-203ENST00000366334 BAZ1AQ9NRL2 1556 aaPredicted RBP13.92□□□□□ -0.18
C2CD3-203ENST00000366334 MROH2BQ7Z745 1585 aa13.83□□□□□ -0.19
C2CD3-203ENST00000366334 SMARCA4P51532 1647 aa13.82□□□□□ -0.2
C2CD3-203ENST00000366334 WIZO95785 1651 aa13.82□□□□□ -0.2
C2CD3-203ENST00000366334 CECR2Q9BXF3 1484 aa13.82□□□□□ -0.2
C2CD3-203ENST00000366334 BICRAQ9NZM4 1560 aa13.81□□□□□ -0.2
C2CD3-203ENST00000366334 MSH5O43196 834 aa13.8□□□□□ -0.2
C2CD3-203ENST00000366334 TOP2AP11388 1531 aaKnown RBP13.72□□□□□ -0.21
C2CD3-203ENST00000366334 PEG3Q9GZU2 1588 aa13.64□□□□□ -0.23
C2CD3-203ENST00000366334 EIF4G1Q04637 1599 aaKnown RBP13.58□□□□□ -0.23
C2CD3-203ENST00000366334 SMARCA2P51531 1590 aa13.56□□□□□ -0.24
C2CD3-203ENST00000366334 PABPN1Q86U42 306 aaKnown RBP eCLIP13.51□□□□□ -0.25
C2CD3-203ENST00000366334 CCDC88BA6NC98 1476 aa13.44□□□□□ -0.26
C2CD3-203ENST00000366334 BAZ1BQ9UIG0 1483 aaKnown RBP13.43□□□□□ -0.26
C2CD3-203ENST00000366334 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
C2CD3-203ENST00000366334 HMGXB3Q12766 1538 aa13.4□□□□□ -0.26
C2CD3-203ENST00000366334 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
C2CD3-203ENST00000366334 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
C2CD3-203ENST00000366334 ABCC8Q09428 1581 aa13.29□□□□□ -0.28
C2CD3-203ENST00000366334 NCAPD3P42695 1498 aa13.27□□□□□ -0.29
C2CD3-203ENST00000366334 EEA1Q15075 1411 aa13.2□□□□□ -0.3
C2CD3-203ENST00000366334 BIVM-ERCC5R4GMW8 1640 aa13.17□□□□□ -0.3
C2CD3-203ENST00000366334 WRNQ14191 1432 aaPredicted RBP eCLIP13.17□□□□□ -0.3
C2CD3-203ENST00000366334 CC2D2AQ9P2K1 1620 aa13.16□□□□□ -0.3
C2CD3-203ENST00000366334 SYNJ1O43426 1573 aa13.15□□□□□ -0.3
C2CD3-203ENST00000366334 LOC105371045A0A1W2PR82 267 aa13.13□□□□□ -0.31
C2CD3-203ENST00000366334 TOP2BQ02880 1626 aa13.13□□□□□ -0.31
C2CD3-203ENST00000366334 FAM9AQ8IZU1 332 aaPredicted RBP13.09□□□□□ -0.31
C2CD3-203ENST00000366334 KIF21BO75037 1637 aa13.06□□□□□ -0.32
C2CD3-203ENST00000366334 CFTRP13569 1480 aa13.04□□□□□ -0.32
C2CD3-203ENST00000366334 PIAS4Q8N2W9 510 aaPredicted RBP13.03□□□□□ -0.32
C2CD3-203ENST00000366334 GOLGA3Q08378 1498 aa13□□□□□ -0.33
C2CD3-203ENST00000366334 SOGA1O94964 1423 aa12.98□□□□□ -0.33
C2CD3-203ENST00000366334 CEP164Q9UPV0 1460 aa12.97□□□□□ -0.33
C2CD3-203ENST00000366334 CUX1P39880 1505 aa12.95□□□□□ -0.34
C2CD3-203ENST00000366334 TNIKQ9UKE5 1360 aa12.93□□□□□ -0.34
C2CD3-203ENST00000366334 CSRNP3Q8WYN3 585 aa12.92□□□□□ -0.34
C2CD3-203ENST00000366334 LAMC3Q9Y6N6 1575 aa12.92□□□□□ -0.34
C2CD3-203ENST00000366334 RUSC2Q8N2Y8 1516 aa12.92□□□□□ -0.34
C2CD3-203ENST00000366334 CADPSQ9ULU8 1353 aa12.92□□□□□ -0.34
C2CD3-203ENST00000366334 ERICH3Q5RHP9 1530 aa12.91□□□□□ -0.34
C2CD3-203ENST00000366334 CEP162Q5TB80 1403 aa12.89□□□□□ -0.35
C2CD3-203ENST00000366334 TRIM26Q12899 539 aaPredicted RBP12.87□□□□□ -0.35
C2CD3-203ENST00000366334 EHMT2Q96KQ7 1210 aa12.86□□□□□ -0.35
C2CD3-203ENST00000366334 PCGF6Q9BYE7 350 aa12.86□□□□□ -0.35
C2CD3-203ENST00000366334 DNMBPQ6XZF7 1577 aa12.86□□□□□ -0.35
C2CD3-203ENST00000366334 KIF27Q86VH2 1401 aa12.84□□□□□ -0.35
C2CD3-203ENST00000366334 FANCD2Q9BXW9 1451 aa12.84□□□□□ -0.35
C2CD3-203ENST00000366334 UBTFP17480 764 aaKnown RBP12.8□□□□□ -0.36
C2CD3-203ENST00000366334 FGD5Q6ZNL6 1462 aa12.78□□□□□ -0.36
C2CD3-203ENST00000366334 WDR97A6NE52 1622 aa12.78□□□□□ -0.36
C2CD3-203ENST00000366334 KIF21AQ7Z4S6 1674 aa12.78□□□□□ -0.36
C2CD3-203ENST00000366334 PRXQ9BXM0 1461 aa12.77□□□□□ -0.37
C2CD3-203ENST00000366334 RAPGEF2Q9Y4G8 1499 aa12.77□□□□□ -0.37
C2CD3-203ENST00000366334 CUL7Q14999 1698 aa12.75□□□□□ -0.37
C2CD3-203ENST00000366334 TOPBP1Q92547 1522 aa12.74□□□□□ -0.37
C2CD3-203ENST00000366334 CLIP1P30622 1438 aa12.74□□□□□ -0.37
C2CD3-203ENST00000366334 HRCP23327 699 aa12.74□□□□□ -0.37
C2CD3-203ENST00000366334 CUX2O14529 1486 aa12.73□□□□□ -0.37
C2CD3-203ENST00000366334 NESP48681 1621 aa12.72□□□□□ -0.37
C2CD3-203ENST00000366334 PDS5BQ9NTI5 1447 aa12.71□□□□□ -0.37
C2CD3-203ENST00000366334 CTTNBP2Q8WZ74 1663 aa12.7□□□□□ -0.38
C2CD3-203ENST00000366334 ABCA10Q8WWZ4 1543 aa12.69□□□□□ -0.38
C2CD3-203ENST00000366334 VPS8Q8N3P4 1428 aa12.69□□□□□ -0.38
C2CD3-203ENST00000366334 POLA1P09884 1462 aaPredicted RBP12.66□□□□□ -0.38
C2CD3-203ENST00000366334 ABCA5Q8WWZ7 1642 aa12.65□□□□□ -0.38
C2CD3-203ENST00000366334 URB2Q14146 1524 aaKnown RBP12.64□□□□□ -0.39
C2CD3-203ENST00000366334 PBRM1Q86U86 1689 aa12.63□□□□□ -0.39
C2CD3-203ENST00000366334 ARAP1Q96P48 1450 aa12.59□□□□□ -0.39
C2CD3-203ENST00000366334 ZEB1P37275 1124 aaPredicted RBP12.58□□□□□ -0.4
C2CD3-203ENST00000366334 MRC2Q9UBG0 1479 aa12.58□□□□□ -0.4
C2CD3-203ENST00000366334 CARMIL1Q5VZK9 1371 aa12.57□□□□□ -0.4
C2CD3-203ENST00000366334 APLP2Q06481 763 aa12.57□□□□□ -0.4
C2CD3-203ENST00000366334 RAD54L2Q9Y4B4 1467 aa12.57□□□□□ -0.4
C2CD3-203ENST00000366334 EFCAB5A4FU69 1503 aa12.57□□□□□ -0.4
C2CD3-203ENST00000366334 IGF1RP08069 1367 aa12.56□□□□□ -0.4
C2CD3-203ENST00000366334 TARBP1Q13395 1621 aaKnown RBP12.56□□□□□ -0.4
C2CD3-203ENST00000366334 CFAP43Q8NDM7 1665 aa12.53□□□□□ -0.4
C2CD3-203ENST00000366334 ARHGAP35Q9NRY4 1499 aa12.52□□□□□ -0.41
C2CD3-203ENST00000366334 WDR62O43379 1518 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 324.1 ms