RNA–Protein interactions for RNA: ENST00000365031.1

RN7SKP48-201, Transcript of RNA, 7SK small nuclear pseudogene 48, humanhuman

BASIC

Gene RN7SKP48, Length 328 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP48-201ENST00000365031 NISCHQ9Y2I1 1504 aa18.64■□□□□ 0.57
RN7SKP48-201ENST00000365031 CCDC180Q9P1Z9 1646 aa16.33■□□□□ 0.2
RN7SKP48-201ENST00000365031 ABCC9O60706 1549 aa16.06■□□□□ 0.16
RN7SKP48-201ENST00000365031 ZCCHC6Q5VYS8 1495 aaKnown RBP15.64■□□□□ 0.09
RN7SKP48-201ENST00000365031 DCAF1Q9Y4B6 1507 aa15.47■□□□□ 0.07
RN7SKP48-201ENST00000365031 DCAF8L2P0C7V8 631 aa15.46■□□□□ 0.07
RN7SKP48-201ENST00000365031 RB1CC1Q8TDY2 1594 aa15.36■□□□□ 0.05
RN7SKP48-201ENST00000365031 MYO15BQ96JP2 1530 aa15.32■□□□□ 0.04
RN7SKP48-201ENST00000365031 NACADO15069 1562 aa15.28■□□□□ 0.04
RN7SKP48-201ENST00000365031 SHROOM4Q9ULL8 1493 aa15.13■□□□□ 0.01
RN7SKP48-201ENST00000365031 UNC13AQ9UPW8 1703 aa15.11■□□□□ 0.01
RN7SKP48-201ENST00000365031 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
RN7SKP48-201ENST00000365031 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
RN7SKP48-201ENST00000365031 BICRAQ9NZM4 1560 aa14.9□□□□□ -0.02
RN7SKP48-201ENST00000365031 DNAJC5BQ9UF47 199 aa14.87□□□□□ -0.03
RN7SKP48-201ENST00000365031 SUPT5HO00267 1087 aaKnown RBP14.59□□□□□ -0.07
RN7SKP48-201ENST00000365031 CC2D2AQ9P2K1 1620 aa14.55□□□□□ -0.08
RN7SKP48-201ENST00000365031 EIF4G1Q04637 1599 aaKnown RBP14.54□□□□□ -0.08
RN7SKP48-201ENST00000365031 BAZ1AQ9NRL2 1556 aaPredicted RBP14.46□□□□□ -0.09
RN7SKP48-201ENST00000365031 CECR2Q9BXF3 1484 aa14.45□□□□□ -0.1
RN7SKP48-201ENST00000365031 RSF1Q96T23 1441 aaPredicted RBP14.41□□□□□ -0.1
RN7SKP48-201ENST00000365031 MROH2BQ7Z745 1585 aa14.34□□□□□ -0.11
RN7SKP48-201ENST00000365031 SMARCA4P51532 1647 aa14.33□□□□□ -0.11
RN7SKP48-201ENST00000365031 WIZO95785 1651 aa14.23□□□□□ -0.13
RN7SKP48-201ENST00000365031 SMARCA2P51531 1590 aa14.18□□□□□ -0.14
RN7SKP48-201ENST00000365031 PEG3Q9GZU2 1588 aa14.17□□□□□ -0.14
RN7SKP48-201ENST00000365031 TOP2AP11388 1531 aaKnown RBP14.15□□□□□ -0.14
RN7SKP48-201ENST00000365031 ATAD2BQ9ULI0 1458 aa14.11□□□□□ -0.15
RN7SKP48-201ENST00000365031 BAZ1BQ9UIG0 1483 aaKnown RBP14.08□□□□□ -0.16
RN7SKP48-201ENST00000365031 NCAPD3P42695 1498 aa14.05□□□□□ -0.16
RN7SKP48-201ENST00000365031 HMGXB3Q12766 1538 aa14.03□□□□□ -0.16
RN7SKP48-201ENST00000365031 CCDC88BA6NC98 1476 aa13.96□□□□□ -0.17
RN7SKP48-201ENST00000365031 CHIC1Q5VXU3 224 aa13.91□□□□□ -0.18
RN7SKP48-201ENST00000365031 ERCC6Q03468 1493 aa13.89□□□□□ -0.19
RN7SKP48-201ENST00000365031 NESP48681 1621 aa13.83□□□□□ -0.2
RN7SKP48-201ENST00000365031 CUX2O14529 1486 aa13.8□□□□□ -0.2
RN7SKP48-201ENST00000365031 TRIM41Q8WV44 630 aa13.78□□□□□ -0.2
RN7SKP48-201ENST00000365031 LAMC3Q9Y6N6 1575 aa13.78□□□□□ -0.2
RN7SKP48-201ENST00000365031 KIF21AQ7Z4S6 1674 aa13.75□□□□□ -0.21
RN7SKP48-201ENST00000365031 THOC2Q8NI27 1593 aaKnown RBP13.73□□□□□ -0.21
RN7SKP48-201ENST00000365031 CFTRP13569 1480 aa13.69□□□□□ -0.22
RN7SKP48-201ENST00000365031 CADPSQ9ULU8 1353 aa13.68□□□□□ -0.22
RN7SKP48-201ENST00000365031 PDS5BQ9NTI5 1447 aa13.65□□□□□ -0.22
RN7SKP48-201ENST00000365031 PRDM2Q13029 1718 aa13.64□□□□□ -0.23
RN7SKP48-201ENST00000365031 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
RN7SKP48-201ENST00000365031 ABCC8Q09428 1581 aa13.62□□□□□ -0.23
RN7SKP48-201ENST00000365031 DNAJC5Q9H3Z4 198 aa13.57□□□□□ -0.24
RN7SKP48-201ENST00000365031 MRC2Q9UBG0 1479 aa13.56□□□□□ -0.24
RN7SKP48-201ENST00000365031 CEP164Q9UPV0 1460 aa13.55□□□□□ -0.24
RN7SKP48-201ENST00000365031 WDR62O43379 1518 aa13.54□□□□□ -0.24
RN7SKP48-201ENST00000365031 FANCD2Q9BXW9 1451 aa13.52□□□□□ -0.25
RN7SKP48-201ENST00000365031 TOP2BQ02880 1626 aa13.51□□□□□ -0.25
RN7SKP48-201ENST00000365031 EEA1Q15075 1411 aa13.5□□□□□ -0.25
RN7SKP48-201ENST00000365031 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
RN7SKP48-201ENST00000365031 BIVM-ERCC5R4GMW8 1640 aa13.49□□□□□ -0.25
RN7SKP48-201ENST00000365031 FAM9AQ8IZU1 332 aaPredicted RBP13.45□□□□□ -0.26
RN7SKP48-201ENST00000365031 CUX1P39880 1505 aa13.44□□□□□ -0.26
RN7SKP48-201ENST00000365031 URB2Q14146 1524 aaKnown RBP13.4□□□□□ -0.26
RN7SKP48-201ENST00000365031 DNMBPQ6XZF7 1577 aa13.4□□□□□ -0.26
RN7SKP48-201ENST00000365031 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
RN7SKP48-201ENST00000365031 SOGA1O94964 1423 aa13.36□□□□□ -0.27
RN7SKP48-201ENST00000365031 TOPBP1Q92547 1522 aa13.34□□□□□ -0.27
RN7SKP48-201ENST00000365031 KIF27Q86VH2 1401 aa13.33□□□□□ -0.28
RN7SKP48-201ENST00000365031 LOC105371045A0A1W2PR82 267 aa13.33□□□□□ -0.28
RN7SKP48-201ENST00000365031 FGD5Q6ZNL6 1462 aa13.33□□□□□ -0.28
RN7SKP48-201ENST00000365031 RUSC2Q8N2Y8 1516 aa13.27□□□□□ -0.29
RN7SKP48-201ENST00000365031 POLA1P09884 1462 aaPredicted RBP13.26□□□□□ -0.29
RN7SKP48-201ENST00000365031 GOLGA3Q08378 1498 aa13.26□□□□□ -0.29
RN7SKP48-201ENST00000365031 KIF21BO75037 1637 aa13.24□□□□□ -0.29
RN7SKP48-201ENST00000365031 IFT140Q96RY7 1462 aa13.24□□□□□ -0.29
RN7SKP48-201ENST00000365031 ABCA10Q8WWZ4 1543 aa13.23□□□□□ -0.29
RN7SKP48-201ENST00000365031 EHMT2Q96KQ7 1210 aa13.23□□□□□ -0.29
RN7SKP48-201ENST00000365031 UBTFP17480 764 aaKnown RBP13.22□□□□□ -0.29
RN7SKP48-201ENST00000365031 EIF4G3O43432 1585 aaKnown RBP13.2□□□□□ -0.3
RN7SKP48-201ENST00000365031 ZNF608Q9ULD9 1512 aaPredicted RBP13.2□□□□□ -0.3
RN7SKP48-201ENST00000365031 RAD54L2Q9Y4B4 1467 aa13.19□□□□□ -0.3
RN7SKP48-201ENST00000365031 TNIKQ9UKE5 1360 aa13.19□□□□□ -0.3
RN7SKP48-201ENST00000365031 ERICH3Q5RHP9 1530 aa13.18□□□□□ -0.3
RN7SKP48-201ENST00000365031 TARBP1Q13395 1621 aaKnown RBP13.17□□□□□ -0.3
RN7SKP48-201ENST00000365031 PRXQ9BXM0 1461 aa13.15□□□□□ -0.3
RN7SKP48-201ENST00000365031 WDR97A6NE52 1622 aa13.14□□□□□ -0.31
RN7SKP48-201ENST00000365031 IGF1RP08069 1367 aa13.14□□□□□ -0.31
RN7SKP48-201ENST00000365031 GAPVD1Q14C86 1478 aa13.12□□□□□ -0.31
RN7SKP48-201ENST00000365031 CARMIL1Q5VZK9 1371 aa13.12□□□□□ -0.31
RN7SKP48-201ENST00000365031 OSCARQ8IYS5 282 aa13.12□□□□□ -0.31
RN7SKP48-201ENST00000365031 CUL7Q14999 1698 aa13.12□□□□□ -0.31
RN7SKP48-201ENST00000365031 RAPGEF2Q9Y4G8 1499 aa13.11□□□□□ -0.31
RN7SKP48-201ENST00000365031 CHD1O14646 1710 aa13.11□□□□□ -0.31
RN7SKP48-201ENST00000365031 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
RN7SKP48-201ENST00000365031 TDRD9Q8NDG6 1382 aaKnown RBP13.09□□□□□ -0.31
RN7SKP48-201ENST00000365031 CEP162Q5TB80 1403 aa13.09□□□□□ -0.31
RN7SKP48-201ENST00000365031 AQRO60306 1485 aaKnown RBP eCLIP13.08□□□□□ -0.32
RN7SKP48-201ENST00000365031 GRIN2BQ13224 1484 aa13.04□□□□□ -0.32
RN7SKP48-201ENST00000365031 RIMBP3CA6NJZ7 1639 aa13.04□□□□□ -0.32
RN7SKP48-201ENST00000365031 RIMBP3BA6NNM3 1639 aa13.04□□□□□ -0.32
RN7SKP48-201ENST00000365031 RIMBP3Q9UFD9 1639 aa13.04□□□□□ -0.32
RN7SKP48-201ENST00000365031 PBRM1Q86U86 1689 aa13.02□□□□□ -0.32
RN7SKP48-201ENST00000365031 CLIP1P30622 1438 aa13.02□□□□□ -0.33
RN7SKP48-201ENST00000365031 FHAD1B1AJZ9 1412 aa13□□□□□ -0.33
RN7SKP48-201ENST00000365031 ARHGEF11O15085 1522 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms