RNA–Protein interactions for RNA: ENST00000364923.1

RN7SKP9-201, Transcript of RNA, 7SK small nuclear pseudogene 9, humanhuman

BASIC

Gene RN7SKP9, Length 299 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP9-201ENST00000364923 NISCHQ9Y2I1 1504 aa28.01■■■□□ 2.07
RN7SKP9-201ENST00000364923 CCDC180Q9P1Z9 1646 aa24.87■■□□□ 1.57
RN7SKP9-201ENST00000364923 ABCC9O60706 1549 aa24.2■■□□□ 1.47
RN7SKP9-201ENST00000364923 DCAF8L2P0C7V8 631 aa23.38■■□□□ 1.33
RN7SKP9-201ENST00000364923 ZCCHC6Q5VYS8 1495 aaKnown RBP23.36■■□□□ 1.33
RN7SKP9-201ENST00000364923 NACADO15069 1562 aa23.35■■□□□ 1.33
RN7SKP9-201ENST00000364923 RB1CC1Q8TDY2 1594 aa23.35■■□□□ 1.33
RN7SKP9-201ENST00000364923 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
RN7SKP9-201ENST00000364923 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
RN7SKP9-201ENST00000364923 UNC13AQ9UPW8 1703 aa22.78■■□□□ 1.24
RN7SKP9-201ENST00000364923 SCRIBQ14160 1630 aa22.71■■□□□ 1.23
RN7SKP9-201ENST00000364923 PABPN1Q86U42 306 aaKnown RBP eCLIP22.62■■□□□ 1.21
RN7SKP9-201ENST00000364923 BICRAQ9NZM4 1560 aa22.59■■□□□ 1.21
RN7SKP9-201ENST00000364923 SHROOM4Q9ULL8 1493 aa22.42■■□□□ 1.18
RN7SKP9-201ENST00000364923 DNAJC5BQ9UF47 199 aa22.02■■□□□ 1.12
RN7SKP9-201ENST00000364923 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
RN7SKP9-201ENST00000364923 CC2D2AQ9P2K1 1620 aa21.89■■□□□ 1.09
RN7SKP9-201ENST00000364923 CECR2Q9BXF3 1484 aa21.78■■□□□ 1.08
RN7SKP9-201ENST00000364923 BAZ1AQ9NRL2 1556 aaPredicted RBP21.73■■□□□ 1.07
RN7SKP9-201ENST00000364923 SMARCA4P51532 1647 aa21.72■■□□□ 1.07
RN7SKP9-201ENST00000364923 MROH2BQ7Z745 1585 aa21.58■■□□□ 1.05
RN7SKP9-201ENST00000364923 SMARCA2P51531 1590 aa21.57■■□□□ 1.04
RN7SKP9-201ENST00000364923 ATAD2BQ9ULI0 1458 aa21.56■■□□□ 1.04
RN7SKP9-201ENST00000364923 NCAPD3P42695 1498 aa21.52■■□□□ 1.04
RN7SKP9-201ENST00000364923 PEG3Q9GZU2 1588 aa21.49■■□□□ 1.03
RN7SKP9-201ENST00000364923 HMGXB3Q12766 1538 aa21.45■■□□□ 1.02
RN7SKP9-201ENST00000364923 BAZ1BQ9UIG0 1483 aaKnown RBP21.43■■□□□ 1.02
RN7SKP9-201ENST00000364923 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
RN7SKP9-201ENST00000364923 WIZO95785 1651 aa21.36■■□□□ 1.01
RN7SKP9-201ENST00000364923 TOP2AP11388 1531 aaKnown RBP21.16■□□□□ 0.98
RN7SKP9-201ENST00000364923 NESP48681 1621 aa20.96■□□□□ 0.95
RN7SKP9-201ENST00000364923 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
RN7SKP9-201ENST00000364923 LAMC3Q9Y6N6 1575 aa20.96■□□□□ 0.95
RN7SKP9-201ENST00000364923 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
RN7SKP9-201ENST00000364923 ERCC6Q03468 1493 aa20.9■□□□□ 0.94
RN7SKP9-201ENST00000364923 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
RN7SKP9-201ENST00000364923 PDS5BQ9NTI5 1447 aa20.82■□□□□ 0.92
RN7SKP9-201ENST00000364923 CFTRP13569 1480 aa20.81■□□□□ 0.92
RN7SKP9-201ENST00000364923 KIF21AQ7Z4S6 1674 aa20.73■□□□□ 0.91
RN7SKP9-201ENST00000364923 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
RN7SKP9-201ENST00000364923 PRDM2Q13029 1718 aa20.68■□□□□ 0.9
RN7SKP9-201ENST00000364923 CEP164Q9UPV0 1460 aa20.67■□□□□ 0.9
RN7SKP9-201ENST00000364923 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
RN7SKP9-201ENST00000364923 CUX2O14529 1486 aa20.6■□□□□ 0.89
RN7SKP9-201ENST00000364923 MRC2Q9UBG0 1479 aa20.6■□□□□ 0.89
RN7SKP9-201ENST00000364923 WDR62O43379 1518 aa20.52■□□□□ 0.87
RN7SKP9-201ENST00000364923 URB2Q14146 1524 aaKnown RBP20.45■□□□□ 0.86
RN7SKP9-201ENST00000364923 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
RN7SKP9-201ENST00000364923 TOPBP1Q92547 1522 aa20.37■□□□□ 0.85
RN7SKP9-201ENST00000364923 DNMBPQ6XZF7 1577 aa20.36■□□□□ 0.85
RN7SKP9-201ENST00000364923 CUX1P39880 1505 aa20.25■□□□□ 0.83
RN7SKP9-201ENST00000364923 IFT140Q96RY7 1462 aa20.21■□□□□ 0.83
RN7SKP9-201ENST00000364923 POLA1P09884 1462 aaPredicted RBP20.2■□□□□ 0.82
RN7SKP9-201ENST00000364923 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
RN7SKP9-201ENST00000364923 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
RN7SKP9-201ENST00000364923 TOP2BQ02880 1626 aa20.12■□□□□ 0.81
RN7SKP9-201ENST00000364923 TARBP1Q13395 1621 aaKnown RBP20.12■□□□□ 0.81
RN7SKP9-201ENST00000364923 SYNJ1O43426 1573 aa20.12■□□□□ 0.81
RN7SKP9-201ENST00000364923 SOGA1O94964 1423 aa20.11■□□□□ 0.81
RN7SKP9-201ENST00000364923 BIVM-ERCC5R4GMW8 1640 aa20.11■□□□□ 0.81
RN7SKP9-201ENST00000364923 RAD54L2Q9Y4B4 1467 aa20.1■□□□□ 0.81
RN7SKP9-201ENST00000364923 ZNF608Q9ULD9 1512 aaPredicted RBP20.09■□□□□ 0.81
RN7SKP9-201ENST00000364923 EIF4G3O43432 1585 aaKnown RBP20.04■□□□□ 0.8
RN7SKP9-201ENST00000364923 AQRO60306 1485 aaKnown RBP eCLIP19.99■□□□□ 0.79
RN7SKP9-201ENST00000364923 WDR97A6NE52 1622 aa19.99■□□□□ 0.79
RN7SKP9-201ENST00000364923 TDRD9Q8NDG6 1382 aaKnown RBP19.98■□□□□ 0.79
RN7SKP9-201ENST00000364923 ABCA10Q8WWZ4 1543 aa19.98■□□□□ 0.79
RN7SKP9-201ENST00000364923 GAPVD1Q14C86 1478 aa19.9■□□□□ 0.78
RN7SKP9-201ENST00000364923 ABCA5Q8WWZ7 1642 aa19.89■□□□□ 0.77
RN7SKP9-201ENST00000364923 GRIN2BQ13224 1484 aa19.88■□□□□ 0.77
RN7SKP9-201ENST00000364923 PBRM1Q86U86 1689 aa19.84■□□□□ 0.77
RN7SKP9-201ENST00000364923 SNAPC4Q5SXM2 1469 aa19.84■□□□□ 0.77
RN7SKP9-201ENST00000364923 MAGI1Q96QZ7 1491 aaPredicted RBP19.82■□□□□ 0.76
RN7SKP9-201ENST00000364923 TRIM41Q8WV44 630 aa19.81■□□□□ 0.76
RN7SKP9-201ENST00000364923 KIF27Q86VH2 1401 aa19.77■□□□□ 0.76
RN7SKP9-201ENST00000364923 FBLN2P98095 1184 aa19.77■□□□□ 0.76
RN7SKP9-201ENST00000364923 DNAJC5Q9H3Z4 198 aa19.77■□□□□ 0.76
RN7SKP9-201ENST00000364923 CHD1O14646 1710 aa19.76■□□□□ 0.75
RN7SKP9-201ENST00000364923 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
RN7SKP9-201ENST00000364923 OSCARQ8IYS5 282 aa19.75■□□□□ 0.75
RN7SKP9-201ENST00000364923 SYNJ2O15056 1496 aa19.74■□□□□ 0.75
RN7SKP9-201ENST00000364923 CHMP7Q8WUX9 453 aaPredicted RBP19.72■□□□□ 0.75
RN7SKP9-201ENST00000364923 ADAMTS12P58397 1594 aa19.7■□□□□ 0.74
RN7SKP9-201ENST00000364923 FHAD1B1AJZ9 1412 aa19.67■□□□□ 0.74
RN7SKP9-201ENST00000364923 GRIN2AQ12879 1464 aa19.62■□□□□ 0.73
RN7SKP9-201ENST00000364923 IGF1RP08069 1367 aa19.62■□□□□ 0.73
RN7SKP9-201ENST00000364923 CUL7Q14999 1698 aa19.62■□□□□ 0.73
RN7SKP9-201ENST00000364923 CHIC1Q5VXU3 224 aa19.6■□□□□ 0.73
RN7SKP9-201ENST00000364923 RUSC2Q8N2Y8 1516 aa19.56■□□□□ 0.72
RN7SKP9-201ENST00000364923 CLASP1Q7Z460 1538 aa19.53■□□□□ 0.72
RN7SKP9-201ENST00000364923 CARMIL1Q5VZK9 1371 aa19.53■□□□□ 0.72
RN7SKP9-201ENST00000364923 NUP160Q12769 1436 aa19.51■□□□□ 0.71
RN7SKP9-201ENST00000364923 CEP170Q5SW79 1584 aa19.5■□□□□ 0.71
RN7SKP9-201ENST00000364923 EEA1Q15075 1411 aa19.47■□□□□ 0.71
RN7SKP9-201ENST00000364923 ARHGEF11O15085 1522 aa19.45■□□□□ 0.7
RN7SKP9-201ENST00000364923 RAPGEF2Q9Y4G8 1499 aa19.44■□□□□ 0.7
RN7SKP9-201ENST00000364923 RIMBP3CA6NJZ7 1639 aa19.42■□□□□ 0.7
RN7SKP9-201ENST00000364923 RIMBP3BA6NNM3 1639 aa19.42■□□□□ 0.7
RN7SKP9-201ENST00000364923 RIMBP3Q9UFD9 1639 aa19.42■□□□□ 0.7
RN7SKP9-201ENST00000364923 CSRNP3Q8WYN3 585 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms