RNA–Protein interactions for RNA: ENST00000364553.1

RN7SKP246-201, Transcript of RNA, 7SK small nuclear pseudogene 246, humanhuman

BASIC

Gene RN7SKP246, Length 317 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP246-201ENST00000364553 NISCHQ9Y2I1 1504 aa22.97■■□□□ 1.27
RN7SKP246-201ENST00000364553 CCDC180Q9P1Z9 1646 aa20.35■□□□□ 0.85
RN7SKP246-201ENST00000364553 ABCC9O60706 1549 aa19.96■□□□□ 0.79
RN7SKP246-201ENST00000364553 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
RN7SKP246-201ENST00000364553 RB1CC1Q8TDY2 1594 aa19.22■□□□□ 0.67
RN7SKP246-201ENST00000364553 NACADO15069 1562 aa19.21■□□□□ 0.67
RN7SKP246-201ENST00000364553 ZCCHC6Q5VYS8 1495 aaKnown RBP19.09■□□□□ 0.65
RN7SKP246-201ENST00000364553 MYO15BQ96JP2 1530 aa19.08■□□□□ 0.64
RN7SKP246-201ENST00000364553 DCAF1Q9Y4B6 1507 aa19■□□□□ 0.63
RN7SKP246-201ENST00000364553 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
RN7SKP246-201ENST00000364553 UNC13AQ9UPW8 1703 aa18.66■□□□□ 0.58
RN7SKP246-201ENST00000364553 SCRIBQ14160 1630 aa18.58■□□□□ 0.56
RN7SKP246-201ENST00000364553 BICRAQ9NZM4 1560 aa18.54■□□□□ 0.56
RN7SKP246-201ENST00000364553 SHROOM4Q9ULL8 1493 aa18.42■□□□□ 0.54
RN7SKP246-201ENST00000364553 DNAJC5BQ9UF47 199 aa18.32■□□□□ 0.52
RN7SKP246-201ENST00000364553 EIF4G1Q04637 1599 aaKnown RBP18.09■□□□□ 0.49
RN7SKP246-201ENST00000364553 CC2D2AQ9P2K1 1620 aa18.02■□□□□ 0.48
RN7SKP246-201ENST00000364553 CECR2Q9BXF3 1484 aa17.95■□□□□ 0.46
RN7SKP246-201ENST00000364553 BAZ1AQ9NRL2 1556 aaPredicted RBP17.81■□□□□ 0.44
RN7SKP246-201ENST00000364553 SMARCA4P51532 1647 aa17.78■□□□□ 0.44
RN7SKP246-201ENST00000364553 NCAPD3P42695 1498 aa17.74■□□□□ 0.43
RN7SKP246-201ENST00000364553 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
RN7SKP246-201ENST00000364553 SMARCA2P51531 1590 aa17.72■□□□□ 0.43
RN7SKP246-201ENST00000364553 MROH2BQ7Z745 1585 aa17.67■□□□□ 0.42
RN7SKP246-201ENST00000364553 BAZ1BQ9UIG0 1483 aaKnown RBP17.6■□□□□ 0.41
RN7SKP246-201ENST00000364553 PEG3Q9GZU2 1588 aa17.6■□□□□ 0.41
RN7SKP246-201ENST00000364553 HMGXB3Q12766 1538 aa17.59■□□□□ 0.41
RN7SKP246-201ENST00000364553 RSF1Q96T23 1441 aaPredicted RBP17.53■□□□□ 0.4
RN7SKP246-201ENST00000364553 WIZO95785 1651 aa17.48■□□□□ 0.39
RN7SKP246-201ENST00000364553 TOP2AP11388 1531 aaKnown RBP17.31■□□□□ 0.36
RN7SKP246-201ENST00000364553 CADPSQ9ULU8 1353 aa17.26■□□□□ 0.35
RN7SKP246-201ENST00000364553 ERCC6Q03468 1493 aa17.25■□□□□ 0.35
RN7SKP246-201ENST00000364553 SUPT5HO00267 1087 aaKnown RBP17.24■□□□□ 0.35
RN7SKP246-201ENST00000364553 NESP48681 1621 aa17.24■□□□□ 0.35
RN7SKP246-201ENST00000364553 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
RN7SKP246-201ENST00000364553 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.34
RN7SKP246-201ENST00000364553 CCDC88BA6NC98 1476 aa17.15■□□□□ 0.34
RN7SKP246-201ENST00000364553 CFTRP13569 1480 aa17.11■□□□□ 0.33
RN7SKP246-201ENST00000364553 CUX2O14529 1486 aa17.03■□□□□ 0.32
RN7SKP246-201ENST00000364553 FANCD2Q9BXW9 1451 aa17.01■□□□□ 0.31
RN7SKP246-201ENST00000364553 KIF21AQ7Z4S6 1674 aa17■□□□□ 0.31
RN7SKP246-201ENST00000364553 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
RN7SKP246-201ENST00000364553 MRC2Q9UBG0 1479 aa16.94■□□□□ 0.3
RN7SKP246-201ENST00000364553 THOC2Q8NI27 1593 aaKnown RBP16.91■□□□□ 0.3
RN7SKP246-201ENST00000364553 PRDM2Q13029 1718 aa16.9■□□□□ 0.3
RN7SKP246-201ENST00000364553 WDR62O43379 1518 aa16.84■□□□□ 0.29
RN7SKP246-201ENST00000364553 ABCC8Q09428 1581 aa16.82■□□□□ 0.28
RN7SKP246-201ENST00000364553 URB2Q14146 1524 aaKnown RBP16.79■□□□□ 0.28
RN7SKP246-201ENST00000364553 TOPBP1Q92547 1522 aa16.72■□□□□ 0.27
RN7SKP246-201ENST00000364553 DNMBPQ6XZF7 1577 aa16.69■□□□□ 0.26
RN7SKP246-201ENST00000364553 IFT140Q96RY7 1462 aa16.65■□□□□ 0.26
RN7SKP246-201ENST00000364553 SOGA1O94964 1423 aa16.6■□□□□ 0.25
RN7SKP246-201ENST00000364553 CUX1P39880 1505 aa16.58■□□□□ 0.24
RN7SKP246-201ENST00000364553 POLA1P09884 1462 aaPredicted RBP16.57■□□□□ 0.24
RN7SKP246-201ENST00000364553 DNAJC5Q9H3Z4 198 aa16.56■□□□□ 0.24
RN7SKP246-201ENST00000364553 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.24
RN7SKP246-201ENST00000364553 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
RN7SKP246-201ENST00000364553 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.23
RN7SKP246-201ENST00000364553 ZNF608Q9ULD9 1512 aaPredicted RBP16.51■□□□□ 0.23
RN7SKP246-201ENST00000364553 TARBP1Q13395 1621 aaKnown RBP16.48■□□□□ 0.23
RN7SKP246-201ENST00000364553 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.23
RN7SKP246-201ENST00000364553 TDRD9Q8NDG6 1382 aaKnown RBP16.48■□□□□ 0.23
RN7SKP246-201ENST00000364553 OSCARQ8IYS5 282 aa16.47■□□□□ 0.23
RN7SKP246-201ENST00000364553 TOP2BQ02880 1626 aa16.45■□□□□ 0.22
RN7SKP246-201ENST00000364553 BIVM-ERCC5R4GMW8 1640 aa16.42■□□□□ 0.22
RN7SKP246-201ENST00000364553 FBLN2P98095 1184 aa16.41■□□□□ 0.22
RN7SKP246-201ENST00000364553 WDR97A6NE52 1622 aa16.41■□□□□ 0.22
RN7SKP246-201ENST00000364553 SYNJ1O43426 1573 aa16.4■□□□□ 0.22
RN7SKP246-201ENST00000364553 EIF4G3O43432 1585 aaKnown RBP16.4■□□□□ 0.22
RN7SKP246-201ENST00000364553 ABCA10Q8WWZ4 1543 aa16.4■□□□□ 0.22
RN7SKP246-201ENST00000364553 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
RN7SKP246-201ENST00000364553 CHMP7Q8WUX9 453 aaPredicted RBP16.37■□□□□ 0.21
RN7SKP246-201ENST00000364553 GRIN2BQ13224 1484 aa16.36■□□□□ 0.21
RN7SKP246-201ENST00000364553 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
RN7SKP246-201ENST00000364553 MAGI1Q96QZ7 1491 aaPredicted RBP16.3■□□□□ 0.2
RN7SKP246-201ENST00000364553 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
RN7SKP246-201ENST00000364553 ABCA5Q8WWZ7 1642 aa16.25■□□□□ 0.19
RN7SKP246-201ENST00000364553 KIF27Q86VH2 1401 aa16.25■□□□□ 0.19
RN7SKP246-201ENST00000364553 SYNJ2O15056 1496 aa16.23■□□□□ 0.19
RN7SKP246-201ENST00000364553 PBRM1Q86U86 1689 aa16.23■□□□□ 0.19
RN7SKP246-201ENST00000364553 ERICH3Q5RHP9 1530 aa16.21■□□□□ 0.19
RN7SKP246-201ENST00000364553 CHD1O14646 1710 aa16.2■□□□□ 0.18
RN7SKP246-201ENST00000364553 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
RN7SKP246-201ENST00000364553 IGF1RP08069 1367 aa16.17■□□□□ 0.18
RN7SKP246-201ENST00000364553 GRIN2AQ12879 1464 aa16.11■□□□□ 0.17
RN7SKP246-201ENST00000364553 ADAMTS12P58397 1594 aa16.1■□□□□ 0.17
RN7SKP246-201ENST00000364553 CARMIL1Q5VZK9 1371 aa16.1■□□□□ 0.17
RN7SKP246-201ENST00000364553 CHIC1Q5VXU3 224 aa16.07■□□□□ 0.16
RN7SKP246-201ENST00000364553 CUL7Q14999 1698 aa16.04■□□□□ 0.16
RN7SKP246-201ENST00000364553 NUP160Q12769 1436 aa16.03■□□□□ 0.16
RN7SKP246-201ENST00000364553 CYB5RLQ6IPT4 315 aa16.03■□□□□ 0.16
RN7SKP246-201ENST00000364553 CLASP1Q7Z460 1538 aa16.03■□□□□ 0.16
RN7SKP246-201ENST00000364553 JPH4Q96JJ6 628 aa16.02■□□□□ 0.16
RN7SKP246-201ENST00000364553 ARHGEF11O15085 1522 aa16.02■□□□□ 0.15
RN7SKP246-201ENST00000364553 RUSC2Q8N2Y8 1516 aa16.01■□□□□ 0.15
RN7SKP246-201ENST00000364553 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
RN7SKP246-201ENST00000364553 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
RN7SKP246-201ENST00000364553 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
RN7SKP246-201ENST00000364553 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
RN7SKP246-201ENST00000364553 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms