RNA–Protein interactions for RNA: ENST00000364488.1

RN7SKP193-201, Transcript of RNA, 7SK small nuclear pseudogene 193, humanhuman

BASIC

Gene RN7SKP193, Length 306 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP193-201ENST00000364488 NISCHQ9Y2I1 1504 aa27.39■■□□□ 1.98
RN7SKP193-201ENST00000364488 CCDC180Q9P1Z9 1646 aa24.03■■□□□ 1.44
RN7SKP193-201ENST00000364488 ABCC9O60706 1549 aa23.37■■□□□ 1.33
RN7SKP193-201ENST00000364488 DCAF8L2P0C7V8 631 aa23.02■■□□□ 1.28
RN7SKP193-201ENST00000364488 ZCCHC6Q5VYS8 1495 aaKnown RBP22.86■■□□□ 1.25
RN7SKP193-201ENST00000364488 DCAF1Q9Y4B6 1507 aa22.57■■□□□ 1.2
RN7SKP193-201ENST00000364488 NACADO15069 1562 aa22.55■■□□□ 1.2
RN7SKP193-201ENST00000364488 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
RN7SKP193-201ENST00000364488 MYO15BQ96JP2 1530 aa22.48■■□□□ 1.19
RN7SKP193-201ENST00000364488 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
RN7SKP193-201ENST00000364488 SHROOM4Q9ULL8 1493 aa22.13■■□□□ 1.13
RN7SKP193-201ENST00000364488 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
RN7SKP193-201ENST00000364488 PABPN1Q86U42 306 aaKnown RBP eCLIP22.02■■□□□ 1.12
RN7SKP193-201ENST00000364488 BICRAQ9NZM4 1560 aa21.85■■□□□ 1.09
RN7SKP193-201ENST00000364488 CECR2Q9BXF3 1484 aa21.4■■□□□ 1.02
RN7SKP193-201ENST00000364488 EIF4G1Q04637 1599 aaKnown RBP21.23■□□□□ 0.99
RN7SKP193-201ENST00000364488 DNAJC5BQ9UF47 199 aa21.19■□□□□ 0.98
RN7SKP193-201ENST00000364488 MROH2BQ7Z745 1585 aa21.18■□□□□ 0.98
RN7SKP193-201ENST00000364488 BAZ1AQ9NRL2 1556 aaPredicted RBP21.16■□□□□ 0.98
RN7SKP193-201ENST00000364488 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
RN7SKP193-201ENST00000364488 RSF1Q96T23 1441 aaPredicted RBP21.08■□□□□ 0.97
RN7SKP193-201ENST00000364488 CC2D2AQ9P2K1 1620 aa21.07■□□□□ 0.96
RN7SKP193-201ENST00000364488 SUPT5HO00267 1087 aaKnown RBP21.06■□□□□ 0.96
RN7SKP193-201ENST00000364488 WIZO95785 1651 aa20.98■□□□□ 0.95
RN7SKP193-201ENST00000364488 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
RN7SKP193-201ENST00000364488 SMARCA2P51531 1590 aa20.88■□□□□ 0.93
RN7SKP193-201ENST00000364488 PEG3Q9GZU2 1588 aa20.86■□□□□ 0.93
RN7SKP193-201ENST00000364488 NCAPD3P42695 1498 aa20.86■□□□□ 0.93
RN7SKP193-201ENST00000364488 BAZ1BQ9UIG0 1483 aaKnown RBP20.81■□□□□ 0.92
RN7SKP193-201ENST00000364488 HMGXB3Q12766 1538 aa20.72■□□□□ 0.91
RN7SKP193-201ENST00000364488 TOP2AP11388 1531 aaKnown RBP20.68■□□□□ 0.9
RN7SKP193-201ENST00000364488 CCDC88BA6NC98 1476 aa20.55■□□□□ 0.88
RN7SKP193-201ENST00000364488 NESP48681 1621 aa20.35■□□□□ 0.85
RN7SKP193-201ENST00000364488 CADPSQ9ULU8 1353 aa20.33■□□□□ 0.84
RN7SKP193-201ENST00000364488 CFTRP13569 1480 aa20.24■□□□□ 0.83
RN7SKP193-201ENST00000364488 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
RN7SKP193-201ENST00000364488 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
RN7SKP193-201ENST00000364488 FANCD2Q9BXW9 1451 aa20.08■□□□□ 0.81
RN7SKP193-201ENST00000364488 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
RN7SKP193-201ENST00000364488 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
RN7SKP193-201ENST00000364488 PRDM2Q13029 1718 aa20.02■□□□□ 0.8
RN7SKP193-201ENST00000364488 CEP164Q9UPV0 1460 aa19.98■□□□□ 0.79
RN7SKP193-201ENST00000364488 ABCC8Q09428 1581 aa19.94■□□□□ 0.78
RN7SKP193-201ENST00000364488 URB2Q14146 1524 aaKnown RBP19.86■□□□□ 0.77
RN7SKP193-201ENST00000364488 MRC2Q9UBG0 1479 aa19.86■□□□□ 0.77
RN7SKP193-201ENST00000364488 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
RN7SKP193-201ENST00000364488 WRNQ14191 1432 aaPredicted RBP eCLIP19.85■□□□□ 0.77
RN7SKP193-201ENST00000364488 THOC2Q8NI27 1593 aaKnown RBP19.81■□□□□ 0.76
RN7SKP193-201ENST00000364488 CUX1P39880 1505 aa19.81■□□□□ 0.76
RN7SKP193-201ENST00000364488 TOPBP1Q92547 1522 aa19.8■□□□□ 0.76
RN7SKP193-201ENST00000364488 TRIM41Q8WV44 630 aa19.79■□□□□ 0.76
RN7SKP193-201ENST00000364488 SYNJ1O43426 1573 aa19.77■□□□□ 0.76
RN7SKP193-201ENST00000364488 DNMBPQ6XZF7 1577 aa19.76■□□□□ 0.75
RN7SKP193-201ENST00000364488 WDR62O43379 1518 aa19.74■□□□□ 0.75
RN7SKP193-201ENST00000364488 TOP2BQ02880 1626 aa19.69■□□□□ 0.74
RN7SKP193-201ENST00000364488 FGD5Q6ZNL6 1462 aa19.69■□□□□ 0.74
RN7SKP193-201ENST00000364488 BIVM-ERCC5R4GMW8 1640 aa19.68■□□□□ 0.74
RN7SKP193-201ENST00000364488 RAD54L2Q9Y4B4 1467 aa19.67■□□□□ 0.74
RN7SKP193-201ENST00000364488 POLA1P09884 1462 aaPredicted RBP19.66■□□□□ 0.74
RN7SKP193-201ENST00000364488 SOGA1O94964 1423 aa19.65■□□□□ 0.74
RN7SKP193-201ENST00000364488 CUX2O14529 1486 aa19.63■□□□□ 0.73
RN7SKP193-201ENST00000364488 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
RN7SKP193-201ENST00000364488 TDRD9Q8NDG6 1382 aaKnown RBP19.53■□□□□ 0.72
RN7SKP193-201ENST00000364488 TARBP1Q13395 1621 aaKnown RBP19.51■□□□□ 0.71
RN7SKP193-201ENST00000364488 ZNF608Q9ULD9 1512 aaPredicted RBP19.51■□□□□ 0.71
RN7SKP193-201ENST00000364488 FAM9AQ8IZU1 332 aaPredicted RBP19.5■□□□□ 0.71
RN7SKP193-201ENST00000364488 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.71
RN7SKP193-201ENST00000364488 RUSC2Q8N2Y8 1516 aa19.48■□□□□ 0.71
RN7SKP193-201ENST00000364488 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
RN7SKP193-201ENST00000364488 WDR97A6NE52 1622 aa19.41■□□□□ 0.7
RN7SKP193-201ENST00000364488 KIF27Q86VH2 1401 aa19.38■□□□□ 0.69
RN7SKP193-201ENST00000364488 GAPVD1Q14C86 1478 aa19.37■□□□□ 0.69
RN7SKP193-201ENST00000364488 EIF4G3O43432 1585 aaKnown RBP19.35■□□□□ 0.69
RN7SKP193-201ENST00000364488 IGF1RP08069 1367 aa19.32■□□□□ 0.68
RN7SKP193-201ENST00000364488 CSRNP3Q8WYN3 585 aa19.32■□□□□ 0.68
RN7SKP193-201ENST00000364488 ABCA5Q8WWZ7 1642 aa19.32■□□□□ 0.68
RN7SKP193-201ENST00000364488 EHMT2Q96KQ7 1210 aa19.3■□□□□ 0.68
RN7SKP193-201ENST00000364488 GRIN2BQ13224 1484 aa19.29■□□□□ 0.68
RN7SKP193-201ENST00000364488 PBRM1Q86U86 1689 aa19.26■□□□□ 0.67
RN7SKP193-201ENST00000364488 FBLN2P98095 1184 aa19.25■□□□□ 0.67
RN7SKP193-201ENST00000364488 SNAPC4Q5SXM2 1469 aa19.24■□□□□ 0.67
RN7SKP193-201ENST00000364488 EEA1Q15075 1411 aa19.23■□□□□ 0.67
RN7SKP193-201ENST00000364488 CARMIL1Q5VZK9 1371 aa19.22■□□□□ 0.67
RN7SKP193-201ENST00000364488 ERICH3Q5RHP9 1530 aa19.21■□□□□ 0.67
RN7SKP193-201ENST00000364488 CHMP7Q8WUX9 453 aaPredicted RBP19.2■□□□□ 0.66
RN7SKP193-201ENST00000364488 LOC105371045A0A1W2PR82 267 aa19.15■□□□□ 0.66
RN7SKP193-201ENST00000364488 FHAD1B1AJZ9 1412 aa19.15■□□□□ 0.66
RN7SKP193-201ENST00000364488 MAGI1Q96QZ7 1491 aaPredicted RBP19.15■□□□□ 0.66
RN7SKP193-201ENST00000364488 ADAMTS12P58397 1594 aa19.11■□□□□ 0.65
RN7SKP193-201ENST00000364488 PRXQ9BXM0 1461 aa19.11■□□□□ 0.65
RN7SKP193-201ENST00000364488 SYNJ2O15056 1496 aa19.1■□□□□ 0.65
RN7SKP193-201ENST00000364488 RAPGEF2Q9Y4G8 1499 aa19.09■□□□□ 0.65
RN7SKP193-201ENST00000364488 CUL7Q14999 1698 aa19.09■□□□□ 0.65
RN7SKP193-201ENST00000364488 CHD1O14646 1710 aa19.05■□□□□ 0.64
RN7SKP193-201ENST00000364488 UBTFP17480 764 aaKnown RBP19.05■□□□□ 0.64
RN7SKP193-201ENST00000364488 GRIN2AQ12879 1464 aa19.04■□□□□ 0.64
RN7SKP193-201ENST00000364488 OSCARQ8IYS5 282 aa19.02■□□□□ 0.64
RN7SKP193-201ENST00000364488 KIF21BO75037 1637 aa19■□□□□ 0.63
RN7SKP193-201ENST00000364488 RANGAP1P46060 587 aaPredicted RBP18.98■□□□□ 0.63
RN7SKP193-201ENST00000364488 GOLGA3Q08378 1498 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms