RNA–Protein interactions for RNA: ENST00000361210.6

PTGER3-205, Transcript of prostaglandin E receptor 3, humanhuman

TSL 1 (best)

Gene PTGER3, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER3-205ENST00000361210 NISCHQ9Y2I1 1504 aa43.28■■■■■ 4.52
PTGER3-205ENST00000361210 CCDC180Q9P1Z9 1646 aa37.37■■■■□ 3.57
PTGER3-205ENST00000361210 ZCCHC6Q5VYS8 1495 aaKnown RBP36.5■■■■□ 3.43
PTGER3-205ENST00000361210 SHROOM4Q9ULL8 1493 aa35.94■■■■□ 3.34
PTGER3-205ENST00000361210 DCAF1Q9Y4B6 1507 aa35.71■■■■□ 3.31
PTGER3-205ENST00000361210 DCAF8L2P0C7V8 631 aa35.65■■■■□ 3.3
PTGER3-205ENST00000361210 MYO15BQ96JP2 1530 aa35.01■■■■□ 3.19
PTGER3-205ENST00000361210 ABCC9O60706 1549 aa34.88■■■■□ 3.17
PTGER3-205ENST00000361210 SUPT5HO00267 1087 aaKnown RBP34.88■■■■□ 3.17
PTGER3-205ENST00000361210 NACADO15069 1562 aa34.65■■■■□ 3.14
PTGER3-205ENST00000361210 SCRIBQ14160 1630 aa34.6■■■■□ 3.13
PTGER3-205ENST00000361210 RB1CC1Q8TDY2 1594 aa34.22■■■■□ 3.07
PTGER3-205ENST00000361210 RSF1Q96T23 1441 aaPredicted RBP33.86■■■■□ 3.01
PTGER3-205ENST00000361210 CHIC1Q5VXU3 224 aa33.67■■■□□ 2.98
PTGER3-205ENST00000361210 CECR2Q9BXF3 1484 aa33.64■■■□□ 2.98
PTGER3-205ENST00000361210 UNC13AQ9UPW8 1703 aa33.61■■■□□ 2.97
PTGER3-205ENST00000361210 MROH2BQ7Z745 1585 aa33.51■■■□□ 2.96
PTGER3-205ENST00000361210 BAZ1AQ9NRL2 1556 aaPredicted RBP33.36■■■□□ 2.93
PTGER3-205ENST00000361210 WIZO95785 1651 aa33.29■■■□□ 2.92
PTGER3-205ENST00000361210 BICRAQ9NZM4 1560 aa33.22■■■□□ 2.91
PTGER3-205ENST00000361210 SMARCA4P51532 1647 aa33.14■■■□□ 2.9
PTGER3-205ENST00000361210 PABPN1Q86U42 306 aaKnown RBP eCLIP33.06■■■□□ 2.88
PTGER3-205ENST00000361210 TOP2AP11388 1531 aaKnown RBP32.9■■■□□ 2.86
PTGER3-205ENST00000361210 TRIM41Q8WV44 630 aa32.68■■■□□ 2.82
PTGER3-205ENST00000361210 PEG3Q9GZU2 1588 aa32.65■■■□□ 2.82
PTGER3-205ENST00000361210 EIF4G1Q04637 1599 aaKnown RBP32.65■■■□□ 2.82
PTGER3-205ENST00000361210 SMARCA2P51531 1590 aa32.64■■■□□ 2.82
PTGER3-205ENST00000361210 CCDC88BA6NC98 1476 aa32.61■■■□□ 2.81
PTGER3-205ENST00000361210 LOC105371045A0A1W2PR82 267 aa32.47■■■□□ 2.79
PTGER3-205ENST00000361210 ATAD2BQ9ULI0 1458 aa32.43■■■□□ 2.78
PTGER3-205ENST00000361210 BAZ1BQ9UIG0 1483 aaKnown RBP32.3■■■□□ 2.76
PTGER3-205ENST00000361210 ABCC8Q09428 1581 aa32.2■■■□□ 2.74
PTGER3-205ENST00000361210 FAM9AQ8IZU1 332 aaPredicted RBP32.2■■■□□ 2.74
PTGER3-205ENST00000361210 HMGXB3Q12766 1538 aa32.01■■■□□ 2.71
PTGER3-205ENST00000361210 NCAPD3P42695 1498 aa31.99■■■□□ 2.71
PTGER3-205ENST00000361210 WRNQ14191 1432 aaPredicted RBP eCLIP31.85■■■□□ 2.69
PTGER3-205ENST00000361210 EHMT2Q96KQ7 1210 aa31.79■■■□□ 2.68
PTGER3-205ENST00000361210 SYNJ1O43426 1573 aa31.73■■■□□ 2.67
PTGER3-205ENST00000361210 SOGA1O94964 1423 aa31.72■■■□□ 2.67
PTGER3-205ENST00000361210 PCGF6Q9BYE7 350 aa31.7■■■□□ 2.67
PTGER3-205ENST00000361210 EEA1Q15075 1411 aa31.69■■■□□ 2.66
PTGER3-205ENST00000361210 RUSC2Q8N2Y8 1516 aa31.58■■■□□ 2.65
PTGER3-205ENST00000361210 CC2D2AQ9P2K1 1620 aa31.54■■■□□ 2.64
PTGER3-205ENST00000361210 CSRNP3Q8WYN3 585 aa31.5■■■□□ 2.63
PTGER3-205ENST00000361210 CFTRP13569 1480 aa31.49■■■□□ 2.63
PTGER3-205ENST00000361210 TOP2BQ02880 1626 aa31.49■■■□□ 2.63
PTGER3-205ENST00000361210 TRIM26Q12899 539 aaPredicted RBP31.45■■■□□ 2.63
PTGER3-205ENST00000361210 BIVM-ERCC5R4GMW8 1640 aa31.44■■■□□ 2.62
PTGER3-205ENST00000361210 PRDM2Q13029 1718 aa31.35■■■□□ 2.61
PTGER3-205ENST00000361210 TNIKQ9UKE5 1360 aa31.35■■■□□ 2.61
PTGER3-205ENST00000361210 GOLGA3Q08378 1498 aa31.34■■■□□ 2.61
PTGER3-205ENST00000361210 HRCP23327 699 aa31.29■■■□□ 2.6
PTGER3-205ENST00000361210 CEP162Q5TB80 1403 aa31.28■■■□□ 2.6
PTGER3-205ENST00000361210 CUX1P39880 1505 aa31.28■■■□□ 2.6
PTGER3-205ENST00000361210 KIF21BO75037 1637 aa31.28■■■□□ 2.6
PTGER3-205ENST00000361210 CEP164Q9UPV0 1460 aa31.26■■■□□ 2.59
PTGER3-205ENST00000361210 CADPSQ9ULU8 1353 aa31.25■■■□□ 2.59
PTGER3-205ENST00000361210 UBTFP17480 764 aaKnown RBP31.2■■■□□ 2.59
PTGER3-205ENST00000361210 RAPGEF2Q9Y4G8 1499 aa31.04■■■□□ 2.56
PTGER3-205ENST00000361210 KIF27Q86VH2 1401 aa30.96■■■□□ 2.55
PTGER3-205ENST00000361210 PPARGC1BQ86YN6 1023 aaKnown RBP30.96■■■□□ 2.55
PTGER3-205ENST00000361210 FANCD2Q9BXW9 1451 aa30.94■■■□□ 2.54
PTGER3-205ENST00000361210 ERICH3Q5RHP9 1530 aa30.93■■■□□ 2.54
PTGER3-205ENST00000361210 PRXQ9BXM0 1461 aa30.93■■■□□ 2.54
PTGER3-205ENST00000361210 CLIP1P30622 1438 aa30.88■■■□□ 2.53
PTGER3-205ENST00000361210 NESP48681 1621 aa30.85■■■□□ 2.53
PTGER3-205ENST00000361210 FGD5Q6ZNL6 1462 aa30.84■■■□□ 2.53
PTGER3-205ENST00000361210 DNAJC5BQ9UF47 199 aa30.82■■■□□ 2.52
PTGER3-205ENST00000361210 LAMC3Q9Y6N6 1575 aa30.8■■■□□ 2.52
PTGER3-205ENST00000361210 CUX2O14529 1486 aa30.77■■■□□ 2.52
PTGER3-205ENST00000361210 DNMBPQ6XZF7 1577 aa30.76■■■□□ 2.51
PTGER3-205ENST00000361210 VPS8Q8N3P4 1428 aa30.69■■■□□ 2.5
PTGER3-205ENST00000361210 TOPBP1Q92547 1522 aa30.67■■■□□ 2.5
PTGER3-205ENST00000361210 IGF1RP08069 1367 aa30.63■■■□□ 2.49
PTGER3-205ENST00000361210 TTBK1Q5TCY1 1321 aaPredicted RBP30.61■■■□□ 2.49
PTGER3-205ENST00000361210 RANGAP1P46060 587 aaPredicted RBP30.6■■■□□ 2.49
PTGER3-205ENST00000361210 POLA1P09884 1462 aaPredicted RBP30.59■■■□□ 2.49
PTGER3-205ENST00000361210 PDS5BQ9NTI5 1447 aa30.55■■■□□ 2.48
PTGER3-205ENST00000361210 ABCA10Q8WWZ4 1543 aa30.54■■■□□ 2.48
PTGER3-205ENST00000361210 URB2Q14146 1524 aaKnown RBP30.53■■■□□ 2.48
PTGER3-205ENST00000361210 RAD54L2Q9Y4B4 1467 aa30.53■■■□□ 2.48
PTGER3-205ENST00000361210 ARAP1Q96P48 1450 aa30.5■■■□□ 2.47
PTGER3-205ENST00000361210 ZEB1P37275 1124 aaPredicted RBP30.49■■■□□ 2.47
PTGER3-205ENST00000361210 CARMIL1Q5VZK9 1371 aa30.49■■■□□ 2.47
PTGER3-205ENST00000361210 KIF21AQ7Z4S6 1674 aa30.44■■■□□ 2.46
PTGER3-205ENST00000361210 APLP2Q06481 763 aa30.4■■■□□ 2.46
PTGER3-205ENST00000361210 WDR97A6NE52 1622 aa30.39■■■□□ 2.46
PTGER3-205ENST00000361210 ARHGAP35Q9NRY4 1499 aa30.36■■■□□ 2.45
PTGER3-205ENST00000361210 CUL7Q14999 1698 aa30.32■■■□□ 2.44
PTGER3-205ENST00000361210 ABCA5Q8WWZ7 1642 aa30.26■■■□□ 2.43
PTGER3-205ENST00000361210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.21■■■□□ 2.43
PTGER3-205ENST00000361210 TDRD9Q8NDG6 1382 aaKnown RBP30.17■■■□□ 2.42
PTGER3-205ENST00000361210 GAPVD1Q14C86 1478 aa30.16■■■□□ 2.42
PTGER3-205ENST00000361210 TARBP1Q13395 1621 aaKnown RBP30.15■■■□□ 2.42
PTGER3-205ENST00000361210 CCER1Q8TC90 406 aaPredicted RBP30.15■■■□□ 2.42
PTGER3-205ENST00000361210 MRC2Q9UBG0 1479 aa30.14■■■□□ 2.42
PTGER3-205ENST00000361210 CTTNBP2Q8WZ74 1663 aa30.1■■■□□ 2.41
PTGER3-205ENST00000361210 KANK4Q5T7N3 995 aaPredicted RBP30.06■■■□□ 2.4
PTGER3-205ENST00000361210 EFCAB5A4FU69 1503 aa30.02■■■□□ 2.4
PTGER3-205ENST00000361210 FHAD1B1AJZ9 1412 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms