RNA–Protein interactions for RNA: ENST00000360027.4

SH2D1A-201, Transcript of SH2 domain containing 1A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH2D1A, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1A-201ENST00000360027 AEBP2Q6ZN18 517 aaPredicted RBP26.16■■□□□ 1.78
SH2D1A-201ENST00000360027 NISCHQ9Y2I1 1504 aa24.71■■□□□ 1.55
SH2D1A-201ENST00000360027 CHIC1Q5VXU3 224 aa24.31■■□□□ 1.48
SH2D1A-201ENST00000360027 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
SH2D1A-201ENST00000360027 CCDC180Q9P1Z9 1646 aa21.95■■□□□ 1.1
SH2D1A-201ENST00000360027 PHF23Q9BUL5 403 aaPredicted RBP21.93■■□□□ 1.1
SH2D1A-201ENST00000360027 ABCC9O60706 1549 aa21.58■■□□□ 1.04
SH2D1A-201ENST00000360027 FOXD1Q16676 465 aa20.95■□□□□ 0.94
SH2D1A-201ENST00000360027 NACADO15069 1562 aa20.77■□□□□ 0.92
SH2D1A-201ENST00000360027 RB1CC1Q8TDY2 1594 aa20.77■□□□□ 0.92
SH2D1A-201ENST00000360027 MYO15BQ96JP2 1530 aa20.73■□□□□ 0.91
SH2D1A-201ENST00000360027 POTEDQ86YR6 584 aa20.67■□□□□ 0.9
SH2D1A-201ENST00000360027 DCAF8L2P0C7V8 631 aa20.61■□□□□ 0.89
SH2D1A-201ENST00000360027 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
SH2D1A-201ENST00000360027 DCAF1Q9Y4B6 1507 aa20.54■□□□□ 0.88
SH2D1A-201ENST00000360027 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.82
SH2D1A-201ENST00000360027 BICRAQ9NZM4 1560 aa20.1■□□□□ 0.81
SH2D1A-201ENST00000360027 SHROOM4Q9ULL8 1493 aa20.1■□□□□ 0.81
SH2D1A-201ENST00000360027 UNC13AQ9UPW8 1703 aa20.05■□□□□ 0.8
SH2D1A-201ENST00000360027 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
SH2D1A-201ENST00000360027 SCRIBQ14160 1630 aa19.92■□□□□ 0.78
SH2D1A-201ENST00000360027 MSH5O43196 834 aa19.83■□□□□ 0.77
SH2D1A-201ENST00000360027 EIF4G1Q04637 1599 aaKnown RBP19.6■□□□□ 0.73
SH2D1A-201ENST00000360027 CC2D2AQ9P2K1 1620 aa19.51■□□□□ 0.71
SH2D1A-201ENST00000360027 CECR2Q9BXF3 1484 aa19.48■□□□□ 0.71
SH2D1A-201ENST00000360027 PIAS4Q8N2W9 510 aaPredicted RBP19.36■□□□□ 0.69
SH2D1A-201ENST00000360027 NCAPD3P42695 1498 aa19.22■□□□□ 0.67
SH2D1A-201ENST00000360027 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
SH2D1A-201ENST00000360027 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
SH2D1A-201ENST00000360027 SMARCA4P51532 1647 aa19.12■□□□□ 0.65
SH2D1A-201ENST00000360027 SMARCA2P51531 1590 aa19.11■□□□□ 0.65
SH2D1A-201ENST00000360027 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
SH2D1A-201ENST00000360027 PLPPR3Q6T4P5 718 aa19.05■□□□□ 0.64
SH2D1A-201ENST00000360027 PEG3Q9GZU2 1588 aa19.05■□□□□ 0.64
SH2D1A-201ENST00000360027 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
SH2D1A-201ENST00000360027 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
SH2D1A-201ENST00000360027 BAZ1BQ9UIG0 1483 aaKnown RBP18.95■□□□□ 0.62
SH2D1A-201ENST00000360027 ADRA2BP18089 450 aa18.89■□□□□ 0.61
SH2D1A-201ENST00000360027 RSF1Q96T23 1441 aaPredicted RBP18.8■□□□□ 0.6
SH2D1A-201ENST00000360027 WIZO95785 1651 aa18.66■□□□□ 0.58
SH2D1A-201ENST00000360027 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
SH2D1A-201ENST00000360027 CADPSQ9ULU8 1353 aa18.65■□□□□ 0.58
SH2D1A-201ENST00000360027 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.58
SH2D1A-201ENST00000360027 NESP48681 1621 aa18.61■□□□□ 0.57
SH2D1A-201ENST00000360027 CUX2O14529 1486 aa18.6■□□□□ 0.57
SH2D1A-201ENST00000360027 PDS5BQ9NTI5 1447 aa18.6■□□□□ 0.57
SH2D1A-201ENST00000360027 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
SH2D1A-201ENST00000360027 CFTRP13569 1480 aa18.49■□□□□ 0.55
SH2D1A-201ENST00000360027 CCDC88BA6NC98 1476 aa18.38■□□□□ 0.53
SH2D1A-201ENST00000360027 THOC2Q8NI27 1593 aaKnown RBP18.37■□□□□ 0.53
SH2D1A-201ENST00000360027 FANCD2Q9BXW9 1451 aa18.35■□□□□ 0.53
SH2D1A-201ENST00000360027 MRC2Q9UBG0 1479 aa18.35■□□□□ 0.53
SH2D1A-201ENST00000360027 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.53
SH2D1A-201ENST00000360027 WDR62O43379 1518 aa18.28■□□□□ 0.52
SH2D1A-201ENST00000360027 KIF21AQ7Z4S6 1674 aa18.28■□□□□ 0.52
SH2D1A-201ENST00000360027 DNAJC5Q9H3Z4 198 aa18.2■□□□□ 0.5
SH2D1A-201ENST00000360027 URB2Q14146 1524 aaKnown RBP18.14■□□□□ 0.49
SH2D1A-201ENST00000360027 ABCC8Q09428 1581 aa18.13■□□□□ 0.49
SH2D1A-201ENST00000360027 SUPT5HO00267 1087 aaKnown RBP18.11■□□□□ 0.49
SH2D1A-201ENST00000360027 PRDM2Q13029 1718 aa18.07■□□□□ 0.48
SH2D1A-201ENST00000360027 TOPBP1Q92547 1522 aa18.03■□□□□ 0.48
SH2D1A-201ENST00000360027 IFT140Q96RY7 1462 aa18.01■□□□□ 0.47
SH2D1A-201ENST00000360027 DNMBPQ6XZF7 1577 aa17.99■□□□□ 0.47
SH2D1A-201ENST00000360027 POLA1P09884 1462 aaPredicted RBP17.88■□□□□ 0.45
SH2D1A-201ENST00000360027 ZNF608Q9ULD9 1512 aaPredicted RBP17.84■□□□□ 0.45
SH2D1A-201ENST00000360027 SOGA1O94964 1423 aa17.83■□□□□ 0.45
SH2D1A-201ENST00000360027 OSCARQ8IYS5 282 aa17.83■□□□□ 0.44
SH2D1A-201ENST00000360027 CUX1P39880 1505 aa17.82■□□□□ 0.44
SH2D1A-201ENST00000360027 TARBP1Q13395 1621 aaKnown RBP17.8■□□□□ 0.44
SH2D1A-201ENST00000360027 FGD5Q6ZNL6 1462 aa17.78■□□□□ 0.44
SH2D1A-201ENST00000360027 WDR97A6NE52 1622 aa17.77■□□□□ 0.44
SH2D1A-201ENST00000360027 AQRO60306 1485 aaKnown RBP eCLIP17.75■□□□□ 0.43
SH2D1A-201ENST00000360027 RAD54L2Q9Y4B4 1467 aa17.75■□□□□ 0.43
SH2D1A-201ENST00000360027 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
SH2D1A-201ENST00000360027 EIF4G3O43432 1585 aaKnown RBP17.71■□□□□ 0.43
SH2D1A-201ENST00000360027 TDRD9Q8NDG6 1382 aaKnown RBP17.71■□□□□ 0.43
SH2D1A-201ENST00000360027 ABCA10Q8WWZ4 1543 aa17.67■□□□□ 0.42
SH2D1A-201ENST00000360027 GRIN2BQ13224 1484 aa17.65■□□□□ 0.42
SH2D1A-201ENST00000360027 TOP2BQ02880 1626 aa17.64■□□□□ 0.41
SH2D1A-201ENST00000360027 DMRT2Q9Y5R5 561 aa17.63■□□□□ 0.41
SH2D1A-201ENST00000360027 MAGI1Q96QZ7 1491 aaPredicted RBP17.63■□□□□ 0.41
SH2D1A-201ENST00000360027 GAPVD1Q14C86 1478 aa17.61■□□□□ 0.41
SH2D1A-201ENST00000360027 BIVM-ERCC5R4GMW8 1640 aa17.59■□□□□ 0.41
SH2D1A-201ENST00000360027 MAPK8IP2Q13387 824 aaPredicted RBP17.58■□□□□ 0.4
SH2D1A-201ENST00000360027 SNAPC4Q5SXM2 1469 aa17.57■□□□□ 0.4
SH2D1A-201ENST00000360027 CHMP7Q8WUX9 453 aaPredicted RBP17.56■□□□□ 0.4
SH2D1A-201ENST00000360027 SYNJ1O43426 1573 aa17.56■□□□□ 0.4
SH2D1A-201ENST00000360027 SYNJ2O15056 1496 aa17.55■□□□□ 0.4
SH2D1A-201ENST00000360027 FBLN2P98095 1184 aa17.54■□□□□ 0.4
SH2D1A-201ENST00000360027 ABCA5Q8WWZ7 1642 aa17.52■□□□□ 0.4
SH2D1A-201ENST00000360027 ERICH3Q5RHP9 1530 aa17.46■□□□□ 0.39
SH2D1A-201ENST00000360027 FHAD1B1AJZ9 1412 aa17.45■□□□□ 0.38
SH2D1A-201ENST00000360027 CACNB1Q02641 598 aaPredicted RBP17.43■□□□□ 0.38
SH2D1A-201ENST00000360027 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
SH2D1A-201ENST00000360027 CHD1O14646 1710 aa17.41■□□□□ 0.38
SH2D1A-201ENST00000360027 CLASP1Q7Z460 1538 aa17.4■□□□□ 0.38
SH2D1A-201ENST00000360027 PBRM1Q86U86 1689 aa17.39■□□□□ 0.37
SH2D1A-201ENST00000360027 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
SH2D1A-201ENST00000360027 GRIN2AQ12879 1464 aa17.38■□□□□ 0.37
SH2D1A-201ENST00000360027 TRIM41Q8WV44 630 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms