RNA–Protein interactions for RNA: ENST00000357881.8

RFX4-202, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 2,565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-202ENST00000357881 NISCHQ9Y2I1 1504 aa18.21■□□□□ 0.51
RFX4-202ENST00000357881 CCDC180Q9P1Z9 1646 aa17■□□□□ 0.31
RFX4-202ENST00000357881 ABCC9O60706 1549 aa16.95■□□□□ 0.3
RFX4-202ENST00000357881 AEBP2Q6ZN18 517 aaPredicted RBP16.71■□□□□ 0.26
RFX4-202ENST00000357881 RB1CC1Q8TDY2 1594 aa16.31■□□□□ 0.2
RFX4-202ENST00000357881 DNAJC5BQ9UF47 199 aa16.28■□□□□ 0.2
RFX4-202ENST00000357881 NACADO15069 1562 aa16.1■□□□□ 0.17
RFX4-202ENST00000357881 CHIC1Q5VXU3 224 aa16.05■□□□□ 0.16
RFX4-202ENST00000357881 SHROOM4Q9ULL8 1493 aa15.93■□□□□ 0.14
RFX4-202ENST00000357881 MYO15BQ96JP2 1530 aa15.87■□□□□ 0.13
RFX4-202ENST00000357881 PELP1Q8IZL8 1130 aaKnown RBP15.84■□□□□ 0.13
RFX4-202ENST00000357881 UNC13AQ9UPW8 1703 aa15.84■□□□□ 0.13
RFX4-202ENST00000357881 DNAJC5Q9H3Z4 198 aa15.76■□□□□ 0.11
RFX4-202ENST00000357881 BICRAQ9NZM4 1560 aa15.69■□□□□ 0.1
RFX4-202ENST00000357881 MYT1Q01538 1121 aa15.66■□□□□ 0.1
RFX4-202ENST00000357881 CC2D2AQ9P2K1 1620 aa15.52■□□□□ 0.07
RFX4-202ENST00000357881 CECR2Q9BXF3 1484 aa15.51■□□□□ 0.07
RFX4-202ENST00000357881 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
RFX4-202ENST00000357881 EIF4G1Q04637 1599 aaKnown RBP15.37■□□□□ 0.05
RFX4-202ENST00000357881 CUX2O14529 1486 aa15.36■□□□□ 0.05
RFX4-202ENST00000357881 DCAF1Q9Y4B6 1507 aa15.34■□□□□ 0.05
RFX4-202ENST00000357881 TTBK1Q5TCY1 1321 aaPredicted RBP15.16■□□□□ 0.02
RFX4-202ENST00000357881 PRKCSHP14314 528 aaPredicted RBP15.05■□□□□ -0
RFX4-202ENST00000357881 ZCCHC6Q5VYS8 1495 aaKnown RBP15□□□□□ -0.01
RFX4-202ENST00000357881 DCAF8L2P0C7V8 631 aa14.95□□□□□ -0.02
RFX4-202ENST00000357881 SCRIBQ14160 1630 aa14.91□□□□□ -0.02
RFX4-202ENST00000357881 SLC24A1O60721 1099 aa14.88□□□□□ -0.03
RFX4-202ENST00000357881 SENP3Q9H4L4 574 aaPredicted RBP14.84□□□□□ -0.03
RFX4-202ENST00000357881 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
RFX4-202ENST00000357881 POTEDQ86YR6 584 aa14.8□□□□□ -0.04
RFX4-202ENST00000357881 NCAPD3P42695 1498 aa14.74□□□□□ -0.05
RFX4-202ENST00000357881 HMGXB3Q12766 1538 aa14.7□□□□□ -0.06
RFX4-202ENST00000357881 THOC2Q8NI27 1593 aaKnown RBP14.7□□□□□ -0.06
RFX4-202ENST00000357881 APLP2Q06481 763 aa14.67□□□□□ -0.06
RFX4-202ENST00000357881 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
RFX4-202ENST00000357881 ERICH6Q7L0X2 663 aa14.61□□□□□ -0.07
RFX4-202ENST00000357881 SMARCA2P51531 1590 aa14.61□□□□□ -0.07
RFX4-202ENST00000357881 PHF23Q9BUL5 403 aaPredicted RBP14.49□□□□□ -0.09
RFX4-202ENST00000357881 ATAD2BQ9ULI0 1458 aa14.48□□□□□ -0.09
RFX4-202ENST00000357881 PEG3Q9GZU2 1588 aa14.45□□□□□ -0.1
RFX4-202ENST00000357881 BCL11AQ9H165 835 aa14.45□□□□□ -0.1
RFX4-202ENST00000357881 PDS5BQ9NTI5 1447 aa14.42□□□□□ -0.1
RFX4-202ENST00000357881 BAZ1AQ9NRL2 1556 aaPredicted RBP14.41□□□□□ -0.1
RFX4-202ENST00000357881 TRIM41Q8WV44 630 aa14.41□□□□□ -0.1
RFX4-202ENST00000357881 EHMT2Q96KQ7 1210 aa14.41□□□□□ -0.1
RFX4-202ENST00000357881 KIF21AQ7Z4S6 1674 aa14.4□□□□□ -0.1
RFX4-202ENST00000357881 WDR62O43379 1518 aa14.39□□□□□ -0.11
RFX4-202ENST00000357881 SMARCA4P51532 1647 aa14.39□□□□□ -0.11
RFX4-202ENST00000357881 NESP48681 1621 aa14.34□□□□□ -0.11
RFX4-202ENST00000357881 MRC2Q9UBG0 1479 aa14.33□□□□□ -0.11
RFX4-202ENST00000357881 BAZ1BQ9UIG0 1483 aaKnown RBP14.3□□□□□ -0.12
RFX4-202ENST00000357881 HRCP23327 699 aa14.29□□□□□ -0.12
RFX4-202ENST00000357881 SCAF1Q9H7N4 1312 aaKnown RBP14.27□□□□□ -0.13
RFX4-202ENST00000357881 FAM9AQ8IZU1 332 aaPredicted RBP14.27□□□□□ -0.13
RFX4-202ENST00000357881 OSCARQ8IYS5 282 aa14.21□□□□□ -0.14
RFX4-202ENST00000357881 RIMBP3CA6NJZ7 1639 aa14.2□□□□□ -0.14
RFX4-202ENST00000357881 RIMBP3BA6NNM3 1639 aa14.2□□□□□ -0.14
RFX4-202ENST00000357881 RIMBP3Q9UFD9 1639 aa14.2□□□□□ -0.14
RFX4-202ENST00000357881 DAXXQ9UER7 740 aaPredicted RBP14.16□□□□□ -0.14
RFX4-202ENST00000357881 CADPSQ9ULU8 1353 aa14.14□□□□□ -0.15
RFX4-202ENST00000357881 CEP164Q9UPV0 1460 aa14.09□□□□□ -0.15
RFX4-202ENST00000357881 ARHGEF11O15085 1522 aa14.05□□□□□ -0.16
RFX4-202ENST00000357881 PRDM2Q13029 1718 aa14.03□□□□□ -0.16
RFX4-202ENST00000357881 RSF1Q96T23 1441 aaPredicted RBP13.98□□□□□ -0.17
RFX4-202ENST00000357881 FANCD2Q9BXW9 1451 aa13.95□□□□□ -0.18
RFX4-202ENST00000357881 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
RFX4-202ENST00000357881 CFTRP13569 1480 aa13.91□□□□□ -0.18
RFX4-202ENST00000357881 PPARGC1BQ86YN6 1023 aaKnown RBP13.89□□□□□ -0.19
RFX4-202ENST00000357881 WDR97A6NE52 1622 aa13.88□□□□□ -0.19
RFX4-202ENST00000357881 ABCC8Q09428 1581 aa13.86□□□□□ -0.19
RFX4-202ENST00000357881 MROH2BQ7Z745 1585 aa13.84□□□□□ -0.19
RFX4-202ENST00000357881 URB2Q14146 1524 aaKnown RBP13.84□□□□□ -0.19
RFX4-202ENST00000357881 ARAP1Q96P48 1450 aa13.83□□□□□ -0.19
RFX4-202ENST00000357881 EIF5BO60841 1220 aaKnown RBP13.83□□□□□ -0.2
RFX4-202ENST00000357881 CHD1O14646 1710 aa13.8□□□□□ -0.2
RFX4-202ENST00000357881 CENPBP07199 599 aaPredicted RBP13.79□□□□□ -0.2
RFX4-202ENST00000357881 EIF4G3O43432 1585 aaKnown RBP13.76□□□□□ -0.21
RFX4-202ENST00000357881 PLPPR3Q6T4P5 718 aa13.73□□□□□ -0.21
RFX4-202ENST00000357881 CLASP1Q7Z460 1538 aa13.71□□□□□ -0.21
RFX4-202ENST00000357881 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.22
RFX4-202ENST00000357881 FOXD1Q16676 465 aa13.68□□□□□ -0.22
RFX4-202ENST00000357881 SYNJ1O43426 1573 aa13.67□□□□□ -0.22
RFX4-202ENST00000357881 TOP2AP11388 1531 aaKnown RBP13.67□□□□□ -0.22
RFX4-202ENST00000357881 DNMBPQ6XZF7 1577 aa13.67□□□□□ -0.22
RFX4-202ENST00000357881 CYB5RLQ6IPT4 315 aa13.66□□□□□ -0.22
RFX4-202ENST00000357881 WIZO95785 1651 aa13.66□□□□□ -0.22
RFX4-202ENST00000357881 TARBP1Q13395 1621 aaKnown RBP13.65□□□□□ -0.22
RFX4-202ENST00000357881 TOPBP1Q92547 1522 aa13.64□□□□□ -0.23
RFX4-202ENST00000357881 ZNF608Q9ULD9 1512 aaPredicted RBP13.64□□□□□ -0.23
RFX4-202ENST00000357881 PLEKHG5O94827 1062 aa13.61□□□□□ -0.23
RFX4-202ENST00000357881 MSH5O43196 834 aa13.59□□□□□ -0.23
RFX4-202ENST00000357881 MAGI1Q96QZ7 1491 aaPredicted RBP13.57□□□□□ -0.24
RFX4-202ENST00000357881 KCNA4P22459 653 aa13.57□□□□□ -0.24
RFX4-202ENST00000357881 ANP32EQ9BTT0 268 aa13.5□□□□□ -0.25
RFX4-202ENST00000357881 ACIN1Q9UKV3 1341 aaKnown RBP13.49□□□□□ -0.25
RFX4-202ENST00000357881 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
RFX4-202ENST00000357881 KIF13AQ9H1H9 1805 aa13.45□□□□□ -0.26
RFX4-202ENST00000357881 SYNJ2O15056 1496 aa13.45□□□□□ -0.26
RFX4-202ENST00000357881 GAPVD1Q14C86 1478 aa13.45□□□□□ -0.26
RFX4-202ENST00000357881 GTF3C3Q9Y5Q9 886 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms