RNA–Protein interactions for RNA: ENST00000357759.9

HHLA2-201, Transcript of HERV-H LTR-associating 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HHLA2, Length 2,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA2-201ENST00000357759 NISCHQ9Y2I1 1504 aa18.24■□□□□ 0.51
HHLA2-201ENST00000357759 CCDC180Q9P1Z9 1646 aa16.08■□□□□ 0.17
HHLA2-201ENST00000357759 ABCC9O60706 1549 aa16.02■□□□□ 0.16
HHLA2-201ENST00000357759 DCAF8L2P0C7V8 631 aa15.57■□□□□ 0.08
HHLA2-201ENST00000357759 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
HHLA2-201ENST00000357759 NACADO15069 1562 aa15.19■□□□□ 0.02
HHLA2-201ENST00000357759 ZCCHC6Q5VYS8 1495 aaKnown RBP15.15■□□□□ 0.02
HHLA2-201ENST00000357759 PABPN1Q86U42 306 aaKnown RBP eCLIP15.08■□□□□ 0
HHLA2-201ENST00000357759 MYO15BQ96JP2 1530 aa15.02□□□□□ -0.01
HHLA2-201ENST00000357759 DCAF1Q9Y4B6 1507 aa14.97□□□□□ -0.01
HHLA2-201ENST00000357759 UNC13AQ9UPW8 1703 aa14.88□□□□□ -0.03
HHLA2-201ENST00000357759 SCRIBQ14160 1630 aa14.86□□□□□ -0.03
HHLA2-201ENST00000357759 DNAJC5BQ9UF47 199 aa14.81□□□□□ -0.04
HHLA2-201ENST00000357759 BICRAQ9NZM4 1560 aa14.81□□□□□ -0.04
HHLA2-201ENST00000357759 SHROOM4Q9ULL8 1493 aa14.64□□□□□ -0.07
HHLA2-201ENST00000357759 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
HHLA2-201ENST00000357759 CC2D2AQ9P2K1 1620 aa14.4□□□□□ -0.1
HHLA2-201ENST00000357759 CECR2Q9BXF3 1484 aa14.35□□□□□ -0.11
HHLA2-201ENST00000357759 SMARCA4P51532 1647 aa14.13□□□□□ -0.15
HHLA2-201ENST00000357759 ATAD2BQ9ULI0 1458 aa14.11□□□□□ -0.15
HHLA2-201ENST00000357759 MROH2BQ7Z745 1585 aa14.11□□□□□ -0.15
HHLA2-201ENST00000357759 BAZ1AQ9NRL2 1556 aaPredicted RBP14.11□□□□□ -0.15
HHLA2-201ENST00000357759 NCAPD3P42695 1498 aa14.07□□□□□ -0.16
HHLA2-201ENST00000357759 SMARCA2P51531 1590 aa14.03□□□□□ -0.16
HHLA2-201ENST00000357759 BAZ1BQ9UIG0 1483 aaKnown RBP14□□□□□ -0.17
HHLA2-201ENST00000357759 WIZO95785 1651 aa13.95□□□□□ -0.18
HHLA2-201ENST00000357759 RSF1Q96T23 1441 aaPredicted RBP13.95□□□□□ -0.18
HHLA2-201ENST00000357759 HMGXB3Q12766 1538 aa13.93□□□□□ -0.18
HHLA2-201ENST00000357759 PEG3Q9GZU2 1588 aa13.92□□□□□ -0.18
HHLA2-201ENST00000357759 NESP48681 1621 aa13.86□□□□□ -0.19
HHLA2-201ENST00000357759 SUPT5HO00267 1087 aaKnown RBP13.79□□□□□ -0.2
HHLA2-201ENST00000357759 ERCC6Q03468 1493 aa13.78□□□□□ -0.2
HHLA2-201ENST00000357759 TOP2AP11388 1531 aaKnown RBP13.72□□□□□ -0.21
HHLA2-201ENST00000357759 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.21
HHLA2-201ENST00000357759 LAMC3Q9Y6N6 1575 aa13.66□□□□□ -0.22
HHLA2-201ENST00000357759 CCDC88BA6NC98 1476 aa13.66□□□□□ -0.22
HHLA2-201ENST00000357759 PDS5BQ9NTI5 1447 aa13.65□□□□□ -0.22
HHLA2-201ENST00000357759 CFTRP13569 1480 aa13.58□□□□□ -0.23
HHLA2-201ENST00000357759 KIF21AQ7Z4S6 1674 aa13.58□□□□□ -0.24
HHLA2-201ENST00000357759 FANCD2Q9BXW9 1451 aa13.56□□□□□ -0.24
HHLA2-201ENST00000357759 CUX2O14529 1486 aa13.52□□□□□ -0.25
HHLA2-201ENST00000357759 CEP164Q9UPV0 1460 aa13.52□□□□□ -0.25
HHLA2-201ENST00000357759 THOC2Q8NI27 1593 aaKnown RBP13.5□□□□□ -0.25
HHLA2-201ENST00000357759 MRC2Q9UBG0 1479 aa13.49□□□□□ -0.25
HHLA2-201ENST00000357759 URB2Q14146 1524 aaKnown RBP13.42□□□□□ -0.26
HHLA2-201ENST00000357759 WDR62O43379 1518 aa13.39□□□□□ -0.27
HHLA2-201ENST00000357759 PRDM2Q13029 1718 aa13.34□□□□□ -0.27
HHLA2-201ENST00000357759 TOPBP1Q92547 1522 aa13.32□□□□□ -0.28
HHLA2-201ENST00000357759 DNAJC5Q9H3Z4 198 aa13.28□□□□□ -0.28
HHLA2-201ENST00000357759 ABCC8Q09428 1581 aa13.25□□□□□ -0.29
HHLA2-201ENST00000357759 DNMBPQ6XZF7 1577 aa13.25□□□□□ -0.29
HHLA2-201ENST00000357759 ZNF608Q9ULD9 1512 aaPredicted RBP13.25□□□□□ -0.29
HHLA2-201ENST00000357759 RAD54L2Q9Y4B4 1467 aa13.23□□□□□ -0.29
HHLA2-201ENST00000357759 CUX1P39880 1505 aa13.22□□□□□ -0.29
HHLA2-201ENST00000357759 POLA1P09884 1462 aaPredicted RBP13.21□□□□□ -0.29
HHLA2-201ENST00000357759 IFT140Q96RY7 1462 aa13.21□□□□□ -0.29
HHLA2-201ENST00000357759 SOGA1O94964 1423 aa13.21□□□□□ -0.3
HHLA2-201ENST00000357759 TDRD9Q8NDG6 1382 aaKnown RBP13.2□□□□□ -0.3
HHLA2-201ENST00000357759 AQRO60306 1485 aaKnown RBP eCLIP13.2□□□□□ -0.3
HHLA2-201ENST00000357759 FGD5Q6ZNL6 1462 aa13.19□□□□□ -0.3
HHLA2-201ENST00000357759 FBLN2P98095 1184 aa13.16□□□□□ -0.3
HHLA2-201ENST00000357759 WRNQ14191 1432 aaPredicted RBP eCLIP13.15□□□□□ -0.3
HHLA2-201ENST00000357759 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
HHLA2-201ENST00000357759 OSCARQ8IYS5 282 aa13.12□□□□□ -0.31
HHLA2-201ENST00000357759 EIF4G3O43432 1585 aaKnown RBP13.09□□□□□ -0.31
HHLA2-201ENST00000357759 SYNJ1O43426 1573 aa13.09□□□□□ -0.31
HHLA2-201ENST00000357759 TOP2BQ02880 1626 aa13.04□□□□□ -0.32
HHLA2-201ENST00000357759 CHMP7Q8WUX9 453 aaPredicted RBP13.04□□□□□ -0.32
HHLA2-201ENST00000357759 GAPVD1Q14C86 1478 aa13.02□□□□□ -0.33
HHLA2-201ENST00000357759 SNAPC4Q5SXM2 1469 aa13.01□□□□□ -0.33
HHLA2-201ENST00000357759 ABCA10Q8WWZ4 1543 aa13.01□□□□□ -0.33
HHLA2-201ENST00000357759 BIVM-ERCC5R4GMW8 1640 aa13□□□□□ -0.33
HHLA2-201ENST00000357759 GRIN2BQ13224 1484 aa12.99□□□□□ -0.33
HHLA2-201ENST00000357759 TRIM41Q8WV44 630 aa12.97□□□□□ -0.33
HHLA2-201ENST00000357759 WDR97A6NE52 1622 aa12.95□□□□□ -0.34
HHLA2-201ENST00000357759 CHD1O14646 1710 aa12.94□□□□□ -0.34
HHLA2-201ENST00000357759 ABCA5Q8WWZ7 1642 aa12.92□□□□□ -0.34
HHLA2-201ENST00000357759 MAGI1Q96QZ7 1491 aaPredicted RBP12.92□□□□□ -0.34
HHLA2-201ENST00000357759 PBRM1Q86U86 1689 aa12.9□□□□□ -0.34
HHLA2-201ENST00000357759 SYNJ2O15056 1496 aa12.9□□□□□ -0.34
HHLA2-201ENST00000357759 CYB5RLQ6IPT4 315 aa12.87□□□□□ -0.35
HHLA2-201ENST00000357759 KIF27Q86VH2 1401 aa12.87□□□□□ -0.35
HHLA2-201ENST00000357759 IGF1RP08069 1367 aa12.86□□□□□ -0.35
HHLA2-201ENST00000357759 FHAD1B1AJZ9 1412 aa12.85□□□□□ -0.35
HHLA2-201ENST00000357759 RUSC2Q8N2Y8 1516 aa12.84□□□□□ -0.35
HHLA2-201ENST00000357759 GRIN2AQ12879 1464 aa12.83□□□□□ -0.36
HHLA2-201ENST00000357759 ERICH3Q5RHP9 1530 aa12.82□□□□□ -0.36
HHLA2-201ENST00000357759 ARHGEF11O15085 1522 aa12.82□□□□□ -0.36
HHLA2-201ENST00000357759 ADAMTS12P58397 1594 aa12.81□□□□□ -0.36
HHLA2-201ENST00000357759 RIMBP3CA6NJZ7 1639 aa12.81□□□□□ -0.36
HHLA2-201ENST00000357759 RIMBP3BA6NNM3 1639 aa12.81□□□□□ -0.36
HHLA2-201ENST00000357759 RIMBP3Q9UFD9 1639 aa12.81□□□□□ -0.36
HHLA2-201ENST00000357759 FAM9AQ8IZU1 332 aaPredicted RBP12.8□□□□□ -0.36
HHLA2-201ENST00000357759 CARMIL1Q5VZK9 1371 aa12.79□□□□□ -0.36
HHLA2-201ENST00000357759 CHIC1Q5VXU3 224 aa12.77□□□□□ -0.37
HHLA2-201ENST00000357759 CLASP1Q7Z460 1538 aa12.77□□□□□ -0.37
HHLA2-201ENST00000357759 CEP170Q5SW79 1584 aa12.76□□□□□ -0.37
HHLA2-201ENST00000357759 JPH4Q96JJ6 628 aa12.75□□□□□ -0.37
HHLA2-201ENST00000357759 NUP160Q12769 1436 aa12.75□□□□□ -0.37
HHLA2-201ENST00000357759 TTBK1Q5TCY1 1321 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms