RNA–Protein interactions for RNA: ENST00000356729.5

ATP2B4-202, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 5

Gene ATP2B4, Length 613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-202ENST00000356729 NISCHQ9Y2I1 1504 aa22.35■■□□□ 1.17
ATP2B4-202ENST00000356729 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
ATP2B4-202ENST00000356729 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
ATP2B4-202ENST00000356729 ABCC9O60706 1549 aa19.07■□□□□ 0.64
ATP2B4-202ENST00000356729 CHIC1Q5VXU3 224 aa18.73■□□□□ 0.59
ATP2B4-202ENST00000356729 ZCCHC6Q5VYS8 1495 aaKnown RBP18.66■□□□□ 0.58
ATP2B4-202ENST00000356729 MYO15BQ96JP2 1530 aa18.64■□□□□ 0.57
ATP2B4-202ENST00000356729 DCAF1Q9Y4B6 1507 aa18.59■□□□□ 0.57
ATP2B4-202ENST00000356729 NACADO15069 1562 aa18.58■□□□□ 0.56
ATP2B4-202ENST00000356729 RB1CC1Q8TDY2 1594 aa18.5■□□□□ 0.55
ATP2B4-202ENST00000356729 DCAF8L2P0C7V8 631 aa18.38■□□□□ 0.53
ATP2B4-202ENST00000356729 UNC13AQ9UPW8 1703 aa18■□□□□ 0.47
ATP2B4-202ENST00000356729 BICRAQ9NZM4 1560 aa17.96■□□□□ 0.47
ATP2B4-202ENST00000356729 SCRIBQ14160 1630 aa17.93■□□□□ 0.46
ATP2B4-202ENST00000356729 SHROOM4Q9ULL8 1493 aa17.89■□□□□ 0.45
ATP2B4-202ENST00000356729 PABPN1Q86U42 306 aaKnown RBP eCLIP17.84■□□□□ 0.45
ATP2B4-202ENST00000356729 EIF4G1Q04637 1599 aaKnown RBP17.44■□□□□ 0.38
ATP2B4-202ENST00000356729 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
ATP2B4-202ENST00000356729 CECR2Q9BXF3 1484 aa17.34■□□□□ 0.37
ATP2B4-202ENST00000356729 CC2D2AQ9P2K1 1620 aa17.29■□□□□ 0.36
ATP2B4-202ENST00000356729 BAZ1AQ9NRL2 1556 aaPredicted RBP17.29■□□□□ 0.36
ATP2B4-202ENST00000356729 SMARCA4P51532 1647 aa17.25■□□□□ 0.35
ATP2B4-202ENST00000356729 SENP3Q9H4L4 574 aaPredicted RBP17.2■□□□□ 0.34
ATP2B4-202ENST00000356729 PEG3Q9GZU2 1588 aa17.19■□□□□ 0.34
ATP2B4-202ENST00000356729 MROH2BQ7Z745 1585 aa17.19■□□□□ 0.34
ATP2B4-202ENST00000356729 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
ATP2B4-202ENST00000356729 ATAD2BQ9ULI0 1458 aa17.17■□□□□ 0.34
ATP2B4-202ENST00000356729 SMARCA2P51531 1590 aa17.14■□□□□ 0.33
ATP2B4-202ENST00000356729 RSF1Q96T23 1441 aaPredicted RBP17.1■□□□□ 0.33
ATP2B4-202ENST00000356729 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
ATP2B4-202ENST00000356729 BAZ1BQ9UIG0 1483 aaKnown RBP16.98■□□□□ 0.31
ATP2B4-202ENST00000356729 WIZO95785 1651 aa16.94■□□□□ 0.3
ATP2B4-202ENST00000356729 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
ATP2B4-202ENST00000356729 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
ATP2B4-202ENST00000356729 CCDC88BA6NC98 1476 aa16.65■□□□□ 0.26
ATP2B4-202ENST00000356729 CADPSQ9ULU8 1353 aa16.64■□□□□ 0.26
ATP2B4-202ENST00000356729 LAMC3Q9Y6N6 1575 aa16.63■□□□□ 0.25
ATP2B4-202ENST00000356729 SUPT5HO00267 1087 aaKnown RBP16.62■□□□□ 0.25
ATP2B4-202ENST00000356729 CFTRP13569 1480 aa16.61■□□□□ 0.25
ATP2B4-202ENST00000356729 NESP48681 1621 aa16.57■□□□□ 0.24
ATP2B4-202ENST00000356729 PDS5BQ9NTI5 1447 aa16.51■□□□□ 0.23
ATP2B4-202ENST00000356729 ERCC6Q03468 1493 aa16.41■□□□□ 0.22
ATP2B4-202ENST00000356729 FANCD2Q9BXW9 1451 aa16.41■□□□□ 0.22
ATP2B4-202ENST00000356729 PRDM2Q13029 1718 aa16.37■□□□□ 0.21
ATP2B4-202ENST00000356729 CEP164Q9UPV0 1460 aa16.35■□□□□ 0.21
ATP2B4-202ENST00000356729 KIF21AQ7Z4S6 1674 aa16.34■□□□□ 0.21
ATP2B4-202ENST00000356729 THOC2Q8NI27 1593 aaKnown RBP16.32■□□□□ 0.2
ATP2B4-202ENST00000356729 MRC2Q9UBG0 1479 aa16.31■□□□□ 0.2
ATP2B4-202ENST00000356729 CUX2O14529 1486 aa16.29■□□□□ 0.2
ATP2B4-202ENST00000356729 WDR62O43379 1518 aa16.28■□□□□ 0.2
ATP2B4-202ENST00000356729 URB2Q14146 1524 aaKnown RBP16.24■□□□□ 0.19
ATP2B4-202ENST00000356729 ABCC8Q09428 1581 aa16.23■□□□□ 0.19
ATP2B4-202ENST00000356729 TOPBP1Q92547 1522 aa16.17■□□□□ 0.18
ATP2B4-202ENST00000356729 DNMBPQ6XZF7 1577 aa16.16■□□□□ 0.18
ATP2B4-202ENST00000356729 CUX1P39880 1505 aa16.11■□□□□ 0.17
ATP2B4-202ENST00000356729 POTEDQ86YR6 584 aa16.1■□□□□ 0.17
ATP2B4-202ENST00000356729 WRNQ14191 1432 aaPredicted RBP eCLIP16.08■□□□□ 0.16
ATP2B4-202ENST00000356729 FOXD1Q16676 465 aa16.06■□□□□ 0.16
ATP2B4-202ENST00000356729 POLA1P09884 1462 aaPredicted RBP16.05■□□□□ 0.16
ATP2B4-202ENST00000356729 IFT140Q96RY7 1462 aa16.04■□□□□ 0.16
ATP2B4-202ENST00000356729 TOP2BQ02880 1626 aa16.03■□□□□ 0.16
ATP2B4-202ENST00000356729 BIVM-ERCC5R4GMW8 1640 aa16.02■□□□□ 0.16
ATP2B4-202ENST00000356729 FGD5Q6ZNL6 1462 aa16.01■□□□□ 0.15
ATP2B4-202ENST00000356729 TARBP1Q13395 1621 aaKnown RBP16■□□□□ 0.15
ATP2B4-202ENST00000356729 SYNJ1O43426 1573 aa16■□□□□ 0.15
ATP2B4-202ENST00000356729 SOGA1O94964 1423 aa15.97■□□□□ 0.15
ATP2B4-202ENST00000356729 WDR97A6NE52 1622 aa15.94■□□□□ 0.14
ATP2B4-202ENST00000356729 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
ATP2B4-202ENST00000356729 ABCA10Q8WWZ4 1543 aa15.93■□□□□ 0.14
ATP2B4-202ENST00000356729 ZNF608Q9ULD9 1512 aaPredicted RBP15.91■□□□□ 0.14
ATP2B4-202ENST00000356729 TDRD9Q8NDG6 1382 aaKnown RBP15.84■□□□□ 0.13
ATP2B4-202ENST00000356729 AQRO60306 1485 aaKnown RBP eCLIP15.84■□□□□ 0.132e-8■■■■□ 25.4
ATP2B4-202ENST00000356729 EIF4G3O43432 1585 aaKnown RBP15.83■□□□□ 0.12
ATP2B4-202ENST00000356729 ABCA5Q8WWZ7 1642 aa15.81■□□□□ 0.12
ATP2B4-202ENST00000356729 GAPVD1Q14C86 1478 aa15.79■□□□□ 0.12
ATP2B4-202ENST00000356729 GRIN2BQ13224 1484 aa15.78■□□□□ 0.12
ATP2B4-202ENST00000356729 TRIM41Q8WV44 630 aa15.76■□□□□ 0.11
ATP2B4-202ENST00000356729 MAGI1Q96QZ7 1491 aaPredicted RBP15.74■□□□□ 0.11
ATP2B4-202ENST00000356729 KIF27Q86VH2 1401 aa15.74■□□□□ 0.11
ATP2B4-202ENST00000356729 ERICH3Q5RHP9 1530 aa15.73■□□□□ 0.11
ATP2B4-202ENST00000356729 IGF1RP08069 1367 aa15.7■□□□□ 0.1
ATP2B4-202ENST00000356729 SNAPC4Q5SXM2 1469 aa15.69■□□□□ 0.1
ATP2B4-202ENST00000356729 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
ATP2B4-202ENST00000356729 SYNJ2O15056 1496 aa15.66■□□□□ 0.1
ATP2B4-202ENST00000356729 FHAD1B1AJZ9 1412 aa15.65■□□□□ 0.1
ATP2B4-202ENST00000356729 ADAMTS12P58397 1594 aa15.62■□□□□ 0.09
ATP2B4-202ENST00000356729 OSCARQ8IYS5 282 aa15.61■□□□□ 0.09
ATP2B4-202ENST00000356729 EEA1Q15075 1411 aa15.6■□□□□ 0.09
ATP2B4-202ENST00000356729 RUSC2Q8N2Y8 1516 aa15.59■□□□□ 0.09
ATP2B4-202ENST00000356729 CHMP7Q8WUX9 453 aaPredicted RBP15.58■□□□□ 0.08
ATP2B4-202ENST00000356729 DNAJC5Q9H3Z4 198 aa15.58■□□□□ 0.08
ATP2B4-202ENST00000356729 GRIN2AQ12879 1464 aa15.58■□□□□ 0.08
ATP2B4-202ENST00000356729 CUL7Q14999 1698 aa15.57■□□□□ 0.08
ATP2B4-202ENST00000356729 CARMIL1Q5VZK9 1371 aa15.56■□□□□ 0.08
ATP2B4-202ENST00000356729 NUP160Q12769 1436 aa15.55■□□□□ 0.08
ATP2B4-202ENST00000356729 CHD1O14646 1710 aa15.54■□□□□ 0.08
ATP2B4-202ENST00000356729 PRXQ9BXM0 1461 aa15.53■□□□□ 0.08
ATP2B4-202ENST00000356729 FBLN2P98095 1184 aa15.51■□□□□ 0.07
ATP2B4-202ENST00000356729 CLASP1Q7Z460 1538 aa15.5■□□□□ 0.07
ATP2B4-202ENST00000356729 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms