RNA–Protein interactions for RNA: ENST00000355928.7

LCK-203, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 2

Gene LCK, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-203ENST00000355928 NISCHQ9Y2I1 1504 aa40.89■■■■■ 4.14
LCK-203ENST00000355928 CCDC180Q9P1Z9 1646 aa36.08■■■■□ 3.37
LCK-203ENST00000355928 ABCC9O60706 1549 aa34.61■■■■□ 3.13
LCK-203ENST00000355928 ZCCHC6Q5VYS8 1495 aaKnown RBP34.18■■■■□ 3.06
LCK-203ENST00000355928 DCAF8L2P0C7V8 631 aa34■■■■□ 3.03
LCK-203ENST00000355928 DCAF1Q9Y4B6 1507 aa33.92■■■■□ 3.02
LCK-203ENST00000355928 MYO15BQ96JP2 1530 aa33.83■■■■□ 3.01
LCK-203ENST00000355928 NACADO15069 1562 aa33.8■■■■□ 3
LCK-203ENST00000355928 RB1CC1Q8TDY2 1594 aa33.67■■■□□ 2.98
LCK-203ENST00000355928 SCRIBQ14160 1630 aa32.91■■■□□ 2.86
LCK-203ENST00000355928 UNC13AQ9UPW8 1703 aa32.77■■■□□ 2.84
LCK-203ENST00000355928 SHROOM4Q9ULL8 1493 aa32.68■■■□□ 2.82
LCK-203ENST00000355928 BICRAQ9NZM4 1560 aa32.49■■■□□ 2.79
LCK-203ENST00000355928 PABPN1Q86U42 306 aaKnown RBP eCLIP32.48■■■□□ 2.79
LCK-203ENST00000355928 CECR2Q9BXF3 1484 aa31.72■■■□□ 2.67
LCK-203ENST00000355928 BAZ1AQ9NRL2 1556 aaPredicted RBP31.7■■■□□ 2.67
LCK-203ENST00000355928 EIF4G1Q04637 1599 aaKnown RBP31.64■■■□□ 2.66
LCK-203ENST00000355928 SMARCA4P51532 1647 aa31.57■■■□□ 2.64
LCK-203ENST00000355928 MROH2BQ7Z745 1585 aa31.47■■■□□ 2.63
LCK-203ENST00000355928 RSF1Q96T23 1441 aaPredicted RBP31.41■■■□□ 2.62
LCK-203ENST00000355928 CC2D2AQ9P2K1 1620 aa31.34■■■□□ 2.61
LCK-203ENST00000355928 SMARCA2P51531 1590 aa31.3■■■□□ 2.6
LCK-203ENST00000355928 PEG3Q9GZU2 1588 aa31.26■■■□□ 2.6
LCK-203ENST00000355928 ATAD2BQ9ULI0 1458 aa31.25■■■□□ 2.59
LCK-203ENST00000355928 SUPT5HO00267 1087 aaKnown RBP31.18■■■□□ 2.58
LCK-203ENST00000355928 WIZO95785 1651 aa31.16■■■□□ 2.58
LCK-203ENST00000355928 NCAPD3P42695 1498 aa31.16■■■□□ 2.58
LCK-203ENST00000355928 DNAJC5BQ9UF47 199 aa31.1■■■□□ 2.57
LCK-203ENST00000355928 BAZ1BQ9UIG0 1483 aaKnown RBP31.07■■■□□ 2.56
LCK-203ENST00000355928 HMGXB3Q12766 1538 aa31.06■■■□□ 2.56
LCK-203ENST00000355928 TOP2AP11388 1531 aaKnown RBP30.93■■■□□ 2.54
LCK-203ENST00000355928 CCDC88BA6NC98 1476 aa30.56■■■□□ 2.48
LCK-203ENST00000355928 CADPSQ9ULU8 1353 aa30.31■■■□□ 2.44
LCK-203ENST00000355928 LAMC3Q9Y6N6 1575 aa30.24■■■□□ 2.43
LCK-203ENST00000355928 CFTRP13569 1480 aa30.24■■■□□ 2.43
LCK-203ENST00000355928 NESP48681 1621 aa30.11■■■□□ 2.41
LCK-203ENST00000355928 PDS5BQ9NTI5 1447 aa30.07■■■□□ 2.4
LCK-203ENST00000355928 PRDM2Q13029 1718 aa30.04■■■□□ 2.4
LCK-203ENST00000355928 FANCD2Q9BXW9 1451 aa29.93■■■□□ 2.38
LCK-203ENST00000355928 ERCC6Q03468 1493 aa29.87■■■□□ 2.37
LCK-203ENST00000355928 CEP164Q9UPV0 1460 aa29.85■■■□□ 2.37
LCK-203ENST00000355928 KIF21AQ7Z4S6 1674 aa29.78■■■□□ 2.36
LCK-203ENST00000355928 ABCC8Q09428 1581 aa29.68■■■□□ 2.34
LCK-203ENST00000355928 MRC2Q9UBG0 1479 aa29.66■■■□□ 2.34
LCK-203ENST00000355928 WRNQ14191 1432 aaPredicted RBP eCLIP29.64■■■□□ 2.34
LCK-203ENST00000355928 DNMBPQ6XZF7 1577 aa29.55■■■□□ 2.32
LCK-203ENST00000355928 URB2Q14146 1524 aaKnown RBP29.53■■■□□ 2.32
LCK-203ENST00000355928 THOC2Q8NI27 1593 aaKnown RBP29.51■■■□□ 2.31
LCK-203ENST00000355928 TOPBP1Q92547 1522 aa29.5■■■□□ 2.31
LCK-203ENST00000355928 WDR62O43379 1518 aa29.5■■■□□ 2.31
LCK-203ENST00000355928 CUX1P39880 1505 aa29.49■■■□□ 2.31
LCK-203ENST00000355928 CHIC1Q5VXU3 224 aa29.48■■■□□ 2.31
LCK-203ENST00000355928 TRIM41Q8WV44 630 aa29.48■■■□□ 2.31
LCK-203ENST00000355928 TOP2BQ02880 1626 aa29.47■■■□□ 2.31
LCK-203ENST00000355928 BIVM-ERCC5R4GMW8 1640 aa29.44■■■□□ 2.3
LCK-203ENST00000355928 SYNJ1O43426 1573 aa29.43■■■□□ 2.3
LCK-203ENST00000355928 FGD5Q6ZNL6 1462 aa29.33■■■□□ 2.29
LCK-203ENST00000355928 CUX2O14529 1486 aa29.31■■■□□ 2.28
LCK-203ENST00000355928 POLA1P09884 1462 aaPredicted RBP29.29■■■□□ 2.28
LCK-203ENST00000355928 SOGA1O94964 1423 aa29.25■■■□□ 2.27
LCK-203ENST00000355928 IFT140Q96RY7 1462 aa29.22■■■□□ 2.27
LCK-203ENST00000355928 RAD54L2Q9Y4B4 1467 aa29.14■■■□□ 2.26
LCK-203ENST00000355928 ABCA10Q8WWZ4 1543 aa29.1■■■□□ 2.25
LCK-203ENST00000355928 TARBP1Q13395 1621 aaKnown RBP29.09■■■□□ 2.25
LCK-203ENST00000355928 WDR97A6NE52 1622 aa29.02■■■□□ 2.24
LCK-203ENST00000355928 KIF27Q86VH2 1401 aa29.02■■■□□ 2.24
LCK-203ENST00000355928 TDRD9Q8NDG6 1382 aaKnown RBP28.97■■■□□ 2.23
LCK-203ENST00000355928 EEA1Q15075 1411 aa28.95■■■□□ 2.23
LCK-203ENST00000355928 GAPVD1Q14C86 1478 aa28.91■■■□□ 2.22
LCK-203ENST00000355928 ZNF608Q9ULD9 1512 aaPredicted RBP28.91■■■□□ 2.22
LCK-203ENST00000355928 AQRO60306 1485 aaKnown RBP eCLIP28.88■■■□□ 2.21
LCK-203ENST00000355928 ABCA5Q8WWZ7 1642 aa28.87■■■□□ 2.21
LCK-203ENST00000355928 EIF4G3O43432 1585 aaKnown RBP28.84■■■□□ 2.21
LCK-203ENST00000355928 GRIN2BQ13224 1484 aa28.83■■■□□ 2.21
LCK-203ENST00000355928 ERICH3Q5RHP9 1530 aa28.79■■■□□ 2.2
LCK-203ENST00000355928 RUSC2Q8N2Y8 1516 aa28.79■■■□□ 2.2
LCK-203ENST00000355928 CSRNP3Q8WYN3 585 aa28.79■■■□□ 2.2
LCK-203ENST00000355928 FAM9AQ8IZU1 332 aaPredicted RBP28.78■■■□□ 2.2
LCK-203ENST00000355928 IGF1RP08069 1367 aa28.75■■■□□ 2.19
LCK-203ENST00000355928 PBRM1Q86U86 1689 aa28.74■■■□□ 2.19
LCK-203ENST00000355928 MAGI1Q96QZ7 1491 aaPredicted RBP28.68■■■□□ 2.18
LCK-203ENST00000355928 CUL7Q14999 1698 aa28.66■■■□□ 2.18
LCK-203ENST00000355928 CARMIL1Q5VZK9 1371 aa28.64■■■□□ 2.18
LCK-203ENST00000355928 SNAPC4Q5SXM2 1469 aa28.64■■■□□ 2.17
LCK-203ENST00000355928 FHAD1B1AJZ9 1412 aa28.62■■■□□ 2.17
LCK-203ENST00000355928 CHMP7Q8WUX9 453 aaPredicted RBP28.57■■■□□ 2.16
LCK-203ENST00000355928 ADAMTS12P58397 1594 aa28.55■■■□□ 2.16
LCK-203ENST00000355928 SYNJ2O15056 1496 aa28.55■■■□□ 2.16
LCK-203ENST00000355928 PRXQ9BXM0 1461 aa28.55■■■□□ 2.16
LCK-203ENST00000355928 RAPGEF2Q9Y4G8 1499 aa28.53■■■□□ 2.16
LCK-203ENST00000355928 FBLN2P98095 1184 aa28.51■■■□□ 2.15
LCK-203ENST00000355928 KIF21BO75037 1637 aa28.49■■■□□ 2.15
LCK-203ENST00000355928 GOLGA3Q08378 1498 aa28.42■■■□□ 2.14
LCK-203ENST00000355928 GRIN2AQ12879 1464 aa28.42■■■□□ 2.14
LCK-203ENST00000355928 UBTFP17480 764 aaKnown RBP28.35■■■□□ 2.13
LCK-203ENST00000355928 CHD1O14646 1710 aa28.35■■■□□ 2.13
LCK-203ENST00000355928 EHMT2Q96KQ7 1210 aa28.31■■■□□ 2.12
LCK-203ENST00000355928 OSCARQ8IYS5 282 aa28.29■■■□□ 2.12
LCK-203ENST00000355928 NUP160Q12769 1436 aa28.26■■■□□ 2.12
LCK-203ENST00000355928 LOC105371045A0A1W2PR82 267 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms