RNA–Protein interactions for RNA: ENST00000355899.7

PLS3-202, Transcript of plastin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLS3, Length 3,280 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-202ENST00000355899 NISCHQ9Y2I1 1504 aa17.25■□□□□ 0.35
PLS3-202ENST00000355899 CCDC180Q9P1Z9 1646 aa15.07■□□□□ 0
PLS3-202ENST00000355899 ZCCHC6Q5VYS8 1495 aaKnown RBP14.55□□□□□ -0.08
PLS3-202ENST00000355899 DCAF1Q9Y4B6 1507 aa14.38□□□□□ -0.11
PLS3-202ENST00000355899 MYO15BQ96JP2 1530 aa14.15□□□□□ -0.14
PLS3-202ENST00000355899 SHROOM4Q9ULL8 1493 aa13.99□□□□□ -0.17
PLS3-202ENST00000355899 NACADO15069 1562 aa13.93□□□□□ -0.18
PLS3-202ENST00000355899 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
PLS3-202ENST00000355899 ABCC9O60706 1549 aa13.82□□□□□ -0.2
PLS3-202ENST00000355899 RB1CC1Q8TDY2 1594 aa13.74□□□□□ -0.21
PLS3-202ENST00000355899 SCRIBQ14160 1630 aa13.71□□□□□ -0.21
PLS3-202ENST00000355899 SUPT5HO00267 1087 aaKnown RBP13.57□□□□□ -0.24
PLS3-202ENST00000355899 UNC13AQ9UPW8 1703 aa13.48□□□□□ -0.25
PLS3-202ENST00000355899 RSF1Q96T23 1441 aaPredicted RBP13.41□□□□□ -0.26
PLS3-202ENST00000355899 BAZ1AQ9NRL2 1556 aaPredicted RBP13.33□□□□□ -0.27
PLS3-202ENST00000355899 CECR2Q9BXF3 1484 aa13.29□□□□□ -0.28
PLS3-202ENST00000355899 MROH2BQ7Z745 1585 aa13.28□□□□□ -0.28
PLS3-202ENST00000355899 BICRAQ9NZM4 1560 aa13.28□□□□□ -0.28
PLS3-202ENST00000355899 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
PLS3-202ENST00000355899 WIZO95785 1651 aa13.2□□□□□ -0.3
PLS3-202ENST00000355899 CHIC1Q5VXU3 224 aa13.19□□□□□ -0.3
PLS3-202ENST00000355899 TOP2AP11388 1531 aaKnown RBP13.13□□□□□ -0.31
PLS3-202ENST00000355899 PEG3Q9GZU2 1588 aa13.13□□□□□ -0.31
PLS3-202ENST00000355899 EIF4G1Q04637 1599 aaKnown RBP13.01□□□□□ -0.33
PLS3-202ENST00000355899 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
PLS3-202ENST00000355899 SMARCA2P51531 1590 aa12.99□□□□□ -0.33
PLS3-202ENST00000355899 CCDC88BA6NC98 1476 aa12.93□□□□□ -0.34
PLS3-202ENST00000355899 ATAD2BQ9ULI0 1458 aa12.92□□□□□ -0.34
PLS3-202ENST00000355899 HMGXB3Q12766 1538 aa12.86□□□□□ -0.35
PLS3-202ENST00000355899 BAZ1BQ9UIG0 1483 aaKnown RBP12.86□□□□□ -0.35
PLS3-202ENST00000355899 TRIM41Q8WV44 630 aa12.82□□□□□ -0.36
PLS3-202ENST00000355899 NCAPD3P42695 1498 aa12.81□□□□□ -0.36
PLS3-202ENST00000355899 ABCC8Q09428 1581 aa12.68□□□□□ -0.38
PLS3-202ENST00000355899 PRDM2Q13029 1718 aa12.66□□□□□ -0.38
PLS3-202ENST00000355899 EEA1Q15075 1411 aa12.65□□□□□ -0.38
PLS3-202ENST00000355899 WRNQ14191 1432 aaPredicted RBP eCLIP12.62□□□□□ -0.39
PLS3-202ENST00000355899 CC2D2AQ9P2K1 1620 aa12.6□□□□□ -0.39
PLS3-202ENST00000355899 LOC105371045A0A1W2PR82 267 aa12.6□□□□□ -0.39
PLS3-202ENST00000355899 BIVM-ERCC5R4GMW8 1640 aa12.59□□□□□ -0.39
PLS3-202ENST00000355899 SYNJ1O43426 1573 aa12.57□□□□□ -0.4
PLS3-202ENST00000355899 CFTRP13569 1480 aa12.57□□□□□ -0.4
PLS3-202ENST00000355899 TOP2BQ02880 1626 aa12.57□□□□□ -0.4
PLS3-202ENST00000355899 FAM9AQ8IZU1 332 aaPredicted RBP12.48□□□□□ -0.41
PLS3-202ENST00000355899 KIF21BO75037 1637 aa12.48□□□□□ -0.41
PLS3-202ENST00000355899 SOGA1O94964 1423 aa12.47□□□□□ -0.41
PLS3-202ENST00000355899 CADPSQ9ULU8 1353 aa12.45□□□□□ -0.42
PLS3-202ENST00000355899 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
PLS3-202ENST00000355899 GOLGA3Q08378 1498 aa12.42□□□□□ -0.42
PLS3-202ENST00000355899 CUX1P39880 1505 aa12.42□□□□□ -0.42
PLS3-202ENST00000355899 TNIKQ9UKE5 1360 aa12.42□□□□□ -0.42
PLS3-202ENST00000355899 CEP164Q9UPV0 1460 aa12.41□□□□□ -0.42
PLS3-202ENST00000355899 RUSC2Q8N2Y8 1516 aa12.4□□□□□ -0.42
PLS3-202ENST00000355899 LAMC3Q9Y6N6 1575 aa12.38□□□□□ -0.43
PLS3-202ENST00000355899 ERICH3Q5RHP9 1530 aa12.36□□□□□ -0.43
PLS3-202ENST00000355899 TRIM26Q12899 539 aaPredicted RBP12.33□□□□□ -0.44
PLS3-202ENST00000355899 CEP162Q5TB80 1403 aa12.32□□□□□ -0.44
PLS3-202ENST00000355899 FANCD2Q9BXW9 1451 aa12.31□□□□□ -0.44
PLS3-202ENST00000355899 DNMBPQ6XZF7 1577 aa12.3□□□□□ -0.44
PLS3-202ENST00000355899 KIF27Q86VH2 1401 aa12.3□□□□□ -0.44
PLS3-202ENST00000355899 PRXQ9BXM0 1461 aa12.29□□□□□ -0.44
PLS3-202ENST00000355899 PCGF6Q9BYE7 350 aa12.26□□□□□ -0.45
PLS3-202ENST00000355899 FGD5Q6ZNL6 1462 aa12.24□□□□□ -0.45
PLS3-202ENST00000355899 RAPGEF2Q9Y4G8 1499 aa12.24□□□□□ -0.45
PLS3-202ENST00000355899 UBTFP17480 764 aaKnown RBP12.22□□□□□ -0.45
PLS3-202ENST00000355899 TOPBP1Q92547 1522 aa12.22□□□□□ -0.45
PLS3-202ENST00000355899 PDS5BQ9NTI5 1447 aa12.22□□□□□ -0.45
PLS3-202ENST00000355899 EHMT2Q96KQ7 1210 aa12.2□□□□□ -0.46
PLS3-202ENST00000355899 NESP48681 1621 aa12.2□□□□□ -0.46
PLS3-202ENST00000355899 ABCA10Q8WWZ4 1543 aa12.2□□□□□ -0.46
PLS3-202ENST00000355899 WDR97A6NE52 1622 aa12.19□□□□□ -0.46
PLS3-202ENST00000355899 CLIP1P30622 1438 aa12.18□□□□□ -0.46
PLS3-202ENST00000355899 CUX2O14529 1486 aa12.18□□□□□ -0.46
PLS3-202ENST00000355899 HRCP23327 699 aa12.17□□□□□ -0.46
PLS3-202ENST00000355899 KIF21AQ7Z4S6 1674 aa12.16□□□□□ -0.46
PLS3-202ENST00000355899 POLA1P09884 1462 aaPredicted RBP12.16□□□□□ -0.46
PLS3-202ENST00000355899 CUL7Q14999 1698 aa12.16□□□□□ -0.46
PLS3-202ENST00000355899 URB2Q14146 1524 aaKnown RBP12.14□□□□□ -0.47
PLS3-202ENST00000355899 VPS8Q8N3P4 1428 aa12.14□□□□□ -0.47
PLS3-202ENST00000355899 IGF1RP08069 1367 aa12.14□□□□□ -0.47
PLS3-202ENST00000355899 ABCA5Q8WWZ7 1642 aa12.1□□□□□ -0.47
PLS3-202ENST00000355899 CARMIL1Q5VZK9 1371 aa12.08□□□□□ -0.48
PLS3-202ENST00000355899 RAD54L2Q9Y4B4 1467 aa12.06□□□□□ -0.48
PLS3-202ENST00000355899 TARBP1Q13395 1621 aaKnown RBP12.06□□□□□ -0.48
PLS3-202ENST00000355899 ARAP1Q96P48 1450 aa12.06□□□□□ -0.48
PLS3-202ENST00000355899 MRC2Q9UBG0 1479 aa12.05□□□□□ -0.48
PLS3-202ENST00000355899 CTTNBP2Q8WZ74 1663 aa12.05□□□□□ -0.48
PLS3-202ENST00000355899 ZEB1P37275 1124 aaPredicted RBP12.02□□□□□ -0.49
PLS3-202ENST00000355899 ARHGAP35Q9NRY4 1499 aa12.01□□□□□ -0.49
PLS3-202ENST00000355899 WDR62O43379 1518 aa12.01□□□□□ -0.49
PLS3-202ENST00000355899 EFCAB5A4FU69 1503 aa12□□□□□ -0.49
PLS3-202ENST00000355899 DNAJC5BQ9UF47 199 aa12□□□□□ -0.49
PLS3-202ENST00000355899 GAPVD1Q14C86 1478 aa12□□□□□ -0.49
PLS3-202ENST00000355899 MAP3K1Q13233 1512 aa11.99□□□□□ -0.49
PLS3-202ENST00000355899 PBRM1Q86U86 1689 aa11.99□□□□□ -0.49
PLS3-202ENST00000355899 APLP2Q06481 763 aa11.96□□□□□ -0.49
PLS3-202ENST00000355899 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
PLS3-202ENST00000355899 FHAD1B1AJZ9 1412 aa11.93□□□□□ -0.5
PLS3-202ENST00000355899 THOC2Q8NI27 1593 aaKnown RBP11.93□□□□□ -0.5
PLS3-202ENST00000355899 AQRO60306 1485 aaKnown RBP eCLIP11.92□□□□□ -0.5
PLS3-202ENST00000355899 ADAMTS12P58397 1594 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms