RNA–Protein interactions for RNA: ENST00000354373.2

RFPL1-201, Transcript of ret finger protein like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFPL1, Length 1,496 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1-201ENST00000354373 AEBP2Q6ZN18 517 aaPredicted RBP23.12■■□□□ 1.29
RFPL1-201ENST00000354373 NISCHQ9Y2I1 1504 aa23.09■■□□□ 1.29
RFPL1-201ENST00000354373 CHIC1Q5VXU3 224 aa22.12■■□□□ 1.13
RFPL1-201ENST00000354373 CCDC180Q9P1Z9 1646 aa20.5■□□□□ 0.87
RFPL1-201ENST00000354373 ABCC9O60706 1549 aa20.1■□□□□ 0.81
RFPL1-201ENST00000354373 SENP3Q9H4L4 574 aaPredicted RBP19.88■□□□□ 0.77
RFPL1-201ENST00000354373 PHF23Q9BUL5 403 aaPredicted RBP19.49■□□□□ 0.71
RFPL1-201ENST00000354373 DCAF8L2P0C7V8 631 aa19.45■□□□□ 0.7
RFPL1-201ENST00000354373 RB1CC1Q8TDY2 1594 aa19.31■□□□□ 0.68
RFPL1-201ENST00000354373 NACADO15069 1562 aa19.26■□□□□ 0.67
RFPL1-201ENST00000354373 ZCCHC6Q5VYS8 1495 aaKnown RBP19.23■□□□□ 0.67
RFPL1-201ENST00000354373 MYO15BQ96JP2 1530 aa19.09■□□□□ 0.65
RFPL1-201ENST00000354373 DCAF1Q9Y4B6 1507 aa19.04■□□□□ 0.64
RFPL1-201ENST00000354373 UNC13AQ9UPW8 1703 aa18.88■□□□□ 0.61
RFPL1-201ENST00000354373 PABPN1Q86U42 306 aaKnown RBP eCLIP18.81■□□□□ 0.6
RFPL1-201ENST00000354373 SCRIBQ14160 1630 aa18.8■□□□□ 0.6
RFPL1-201ENST00000354373 BICRAQ9NZM4 1560 aa18.68■□□□□ 0.58
RFPL1-201ENST00000354373 POTEDQ86YR6 584 aa18.65■□□□□ 0.58
RFPL1-201ENST00000354373 FOXD1Q16676 465 aa18.6■□□□□ 0.57
RFPL1-201ENST00000354373 SHROOM4Q9ULL8 1493 aa18.44■□□□□ 0.54
RFPL1-201ENST00000354373 DNAJC5BQ9UF47 199 aa18.35■□□□□ 0.53
RFPL1-201ENST00000354373 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
RFPL1-201ENST00000354373 EIF4G1Q04637 1599 aaKnown RBP18.21■□□□□ 0.51
RFPL1-201ENST00000354373 CC2D2AQ9P2K1 1620 aa18.15■□□□□ 0.5
RFPL1-201ENST00000354373 CECR2Q9BXF3 1484 aa18.02■□□□□ 0.48
RFPL1-201ENST00000354373 SMARCA4P51532 1647 aa17.93■□□□□ 0.46
RFPL1-201ENST00000354373 BAZ1AQ9NRL2 1556 aaPredicted RBP17.91■□□□□ 0.46
RFPL1-201ENST00000354373 MROH2BQ7Z745 1585 aa17.82■□□□□ 0.44
RFPL1-201ENST00000354373 ATAD2BQ9ULI0 1458 aa17.8■□□□□ 0.44
RFPL1-201ENST00000354373 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
RFPL1-201ENST00000354373 MSH5O43196 834 aa17.75■□□□□ 0.43
RFPL1-201ENST00000354373 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
RFPL1-201ENST00000354373 BAZ1BQ9UIG0 1483 aaKnown RBP17.69■□□□□ 0.42
RFPL1-201ENST00000354373 PEG3Q9GZU2 1588 aa17.68■□□□□ 0.42
RFPL1-201ENST00000354373 HMGXB3Q12766 1538 aa17.68■□□□□ 0.42
RFPL1-201ENST00000354373 WIZO95785 1651 aa17.67■□□□□ 0.42
RFPL1-201ENST00000354373 RSF1Q96T23 1441 aaPredicted RBP17.62■□□□□ 0.41
RFPL1-201ENST00000354373 TOP2AP11388 1531 aaKnown RBP17.44■□□□□ 0.38
RFPL1-201ENST00000354373 NESP48681 1621 aa17.39■□□□□ 0.37
RFPL1-201ENST00000354373 SUPT5HO00267 1087 aaKnown RBP17.35■□□□□ 0.37
RFPL1-201ENST00000354373 ERCC6Q03468 1493 aa17.34■□□□□ 0.37
RFPL1-201ENST00000354373 LAMC3Q9Y6N6 1575 aa17.31■□□□□ 0.36
RFPL1-201ENST00000354373 CADPSQ9ULU8 1353 aa17.27■□□□□ 0.36
RFPL1-201ENST00000354373 CCDC88BA6NC98 1476 aa17.25■□□□□ 0.35
RFPL1-201ENST00000354373 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.35
RFPL1-201ENST00000354373 KIF21AQ7Z4S6 1674 aa17.19■□□□□ 0.34
RFPL1-201ENST00000354373 PIAS4Q8N2W9 510 aaPredicted RBP17.17■□□□□ 0.34
RFPL1-201ENST00000354373 CFTRP13569 1480 aa17.16■□□□□ 0.34
RFPL1-201ENST00000354373 FANCD2Q9BXW9 1451 aa17.1■□□□□ 0.33
RFPL1-201ENST00000354373 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.32
RFPL1-201ENST00000354373 THOC2Q8NI27 1593 aaKnown RBP17.07■□□□□ 0.32
RFPL1-201ENST00000354373 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
RFPL1-201ENST00000354373 CUX2O14529 1486 aa17.04■□□□□ 0.32
RFPL1-201ENST00000354373 MRC2Q9UBG0 1479 aa17.03■□□□□ 0.32
RFPL1-201ENST00000354373 WDR62O43379 1518 aa16.95■□□□□ 0.3
RFPL1-201ENST00000354373 ADRA2BP18089 450 aa16.93■□□□□ 0.3
RFPL1-201ENST00000354373 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
RFPL1-201ENST00000354373 PPP6R1Q9UPN7 881 aa16.86■□□□□ 0.29
RFPL1-201ENST00000354373 TOPBP1Q92547 1522 aa16.82■□□□□ 0.28
RFPL1-201ENST00000354373 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
RFPL1-201ENST00000354373 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
RFPL1-201ENST00000354373 CUX1P39880 1505 aa16.71■□□□□ 0.27
RFPL1-201ENST00000354373 IFT140Q96RY7 1462 aa16.69■□□□□ 0.26
RFPL1-201ENST00000354373 POLA1P09884 1462 aaPredicted RBP16.69■□□□□ 0.26
RFPL1-201ENST00000354373 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
RFPL1-201ENST00000354373 ZNF608Q9ULD9 1512 aaPredicted RBP16.64■□□□□ 0.25
RFPL1-201ENST00000354373 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
RFPL1-201ENST00000354373 SOGA1O94964 1423 aa16.64■□□□□ 0.25
RFPL1-201ENST00000354373 WRNQ14191 1432 aaPredicted RBP eCLIP16.64■□□□□ 0.25
RFPL1-201ENST00000354373 TARBP1Q13395 1621 aaKnown RBP16.62■□□□□ 0.25
RFPL1-201ENST00000354373 SYNJ1O43426 1573 aa16.61■□□□□ 0.25
RFPL1-201ENST00000354373 EIF4G3O43432 1585 aaKnown RBP16.58■□□□□ 0.25
RFPL1-201ENST00000354373 TOP2BQ02880 1626 aa16.58■□□□□ 0.24
RFPL1-201ENST00000354373 BIVM-ERCC5R4GMW8 1640 aa16.57■□□□□ 0.24
RFPL1-201ENST00000354373 AQRO60306 1485 aaKnown RBP eCLIP16.57■□□□□ 0.24
RFPL1-201ENST00000354373 TDRD9Q8NDG6 1382 aaKnown RBP16.55■□□□□ 0.24
RFPL1-201ENST00000354373 WDR97A6NE52 1622 aa16.49■□□□□ 0.23
RFPL1-201ENST00000354373 DNAJC5Q9H3Z4 198 aa16.48■□□□□ 0.23
RFPL1-201ENST00000354373 ABCA10Q8WWZ4 1543 aa16.47■□□□□ 0.23
RFPL1-201ENST00000354373 FBLN2P98095 1184 aa16.45■□□□□ 0.22
RFPL1-201ENST00000354373 GAPVD1Q14C86 1478 aa16.44■□□□□ 0.22
RFPL1-201ENST00000354373 PBRM1Q86U86 1689 aa16.42■□□□□ 0.22
RFPL1-201ENST00000354373 GRIN2BQ13224 1484 aa16.42■□□□□ 0.22
RFPL1-201ENST00000354373 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
RFPL1-201ENST00000354373 SNAPC4Q5SXM2 1469 aa16.41■□□□□ 0.22
RFPL1-201ENST00000354373 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
RFPL1-201ENST00000354373 CHD1O14646 1710 aa16.39■□□□□ 0.21
RFPL1-201ENST00000354373 MAGI1Q96QZ7 1491 aaPredicted RBP16.36■□□□□ 0.21
RFPL1-201ENST00000354373 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
RFPL1-201ENST00000354373 TRIM41Q8WV44 630 aa16.35■□□□□ 0.21
RFPL1-201ENST00000354373 KCNA4P22459 653 aa16.32■□□□□ 0.2
RFPL1-201ENST00000354373 SYNJ2O15056 1496 aa16.3■□□□□ 0.2
RFPL1-201ENST00000354373 KIF27Q86VH2 1401 aa16.29■□□□□ 0.2
RFPL1-201ENST00000354373 ERICH3Q5RHP9 1530 aa16.28■□□□□ 0.2
RFPL1-201ENST00000354373 ADAMTS12P58397 1594 aa16.26■□□□□ 0.19
RFPL1-201ENST00000354373 FHAD1B1AJZ9 1412 aa16.23■□□□□ 0.19
RFPL1-201ENST00000354373 GRIN2AQ12879 1464 aa16.21■□□□□ 0.18
RFPL1-201ENST00000354373 IGF1RP08069 1367 aa16.19■□□□□ 0.18
RFPL1-201ENST00000354373 RUSC2Q8N2Y8 1516 aa16.17■□□□□ 0.18
RFPL1-201ENST00000354373 CUL7Q14999 1698 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms