RNA–Protein interactions for RNA: ENST00000354352.9

SLC11A1-202, Transcript of solute carrier family 11 member 1, humanhuman

TSL 1 (best)

Gene SLC11A1, Length 2,136 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A1-202ENST00000354352 NISCHQ9Y2I1 1504 aa37.54■■■■□ 3.6
SLC11A1-202ENST00000354352 CCDC180Q9P1Z9 1646 aa32.36■■■□□ 2.77
SLC11A1-202ENST00000354352 ZCCHC6Q5VYS8 1495 aaKnown RBP31.65■■■□□ 2.66
SLC11A1-202ENST00000354352 SHROOM4Q9ULL8 1493 aa31.14■■■□□ 2.58
SLC11A1-202ENST00000354352 DCAF1Q9Y4B6 1507 aa30.99■■■□□ 2.55
SLC11A1-202ENST00000354352 DCAF8L2P0C7V8 631 aa30.94■■■□□ 2.54
SLC11A1-202ENST00000354352 MYO15BQ96JP2 1530 aa30.4■■■□□ 2.46
SLC11A1-202ENST00000354352 ABCC9O60706 1549 aa30.26■■■□□ 2.44
SLC11A1-202ENST00000354352 SUPT5HO00267 1087 aaKnown RBP30.23■■■□□ 2.43
SLC11A1-202ENST00000354352 NACADO15069 1562 aa30.06■■■□□ 2.4
SLC11A1-202ENST00000354352 SCRIBQ14160 1630 aa29.96■■■□□ 2.39
SLC11A1-202ENST00000354352 RB1CC1Q8TDY2 1594 aa29.66■■■□□ 2.34
SLC11A1-202ENST00000354352 RSF1Q96T23 1441 aaPredicted RBP29.39■■■□□ 2.3
SLC11A1-202ENST00000354352 CHIC1Q5VXU3 224 aa29.23■■■□□ 2.27
SLC11A1-202ENST00000354352 CECR2Q9BXF3 1484 aa29.2■■■□□ 2.26
SLC11A1-202ENST00000354352 UNC13AQ9UPW8 1703 aa29.09■■■□□ 2.25
SLC11A1-202ENST00000354352 MROH2BQ7Z745 1585 aa29.07■■■□□ 2.24
SLC11A1-202ENST00000354352 BAZ1AQ9NRL2 1556 aaPredicted RBP28.91■■■□□ 2.22
SLC11A1-202ENST00000354352 WIZO95785 1651 aa28.83■■■□□ 2.21
SLC11A1-202ENST00000354352 BICRAQ9NZM4 1560 aa28.83■■■□□ 2.21
SLC11A1-202ENST00000354352 PABPN1Q86U42 306 aaKnown RBP eCLIP28.72■■■□□ 2.19
SLC11A1-202ENST00000354352 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
SLC11A1-202ENST00000354352 TOP2AP11388 1531 aaKnown RBP28.51■■■□□ 2.15
SLC11A1-202ENST00000354352 TRIM41Q8WV44 630 aa28.34■■■□□ 2.13
SLC11A1-202ENST00000354352 PEG3Q9GZU2 1588 aa28.33■■■□□ 2.13
SLC11A1-202ENST00000354352 CCDC88BA6NC98 1476 aa28.3■■■□□ 2.12
SLC11A1-202ENST00000354352 SMARCA2P51531 1590 aa28.28■■■□□ 2.12
SLC11A1-202ENST00000354352 EIF4G1Q04637 1599 aaKnown RBP28.28■■■□□ 2.12
SLC11A1-202ENST00000354352 LOC105371045A0A1W2PR82 267 aa28.18■■■□□ 2.1
SLC11A1-202ENST00000354352 ATAD2BQ9ULI0 1458 aa28.15■■■□□ 2.1
SLC11A1-202ENST00000354352 BAZ1BQ9UIG0 1483 aaKnown RBP28■■■□□ 2.07
SLC11A1-202ENST00000354352 FAM9AQ8IZU1 332 aaPredicted RBP27.9■■■□□ 2.06
SLC11A1-202ENST00000354352 ABCC8Q09428 1581 aa27.89■■■□□ 2.06
SLC11A1-202ENST00000354352 NCAPD3P42695 1498 aa27.79■■■□□ 2.04
SLC11A1-202ENST00000354352 HMGXB3Q12766 1538 aa27.76■■■□□ 2.03
SLC11A1-202ENST00000354352 WRNQ14191 1432 aaPredicted RBP eCLIP27.62■■■□□ 2.01
SLC11A1-202ENST00000354352 EHMT2Q96KQ7 1210 aa27.53■■■□□ 2
SLC11A1-202ENST00000354352 SOGA1O94964 1423 aa27.51■■□□□ 1.99
SLC11A1-202ENST00000354352 SYNJ1O43426 1573 aa27.48■■□□□ 1.99
SLC11A1-202ENST00000354352 EEA1Q15075 1411 aa27.48■■□□□ 1.99
SLC11A1-202ENST00000354352 PCGF6Q9BYE7 350 aa27.46■■□□□ 1.99
SLC11A1-202ENST00000354352 RUSC2Q8N2Y8 1516 aa27.38■■□□□ 1.97
SLC11A1-202ENST00000354352 CC2D2AQ9P2K1 1620 aa27.35■■□□□ 1.97
SLC11A1-202ENST00000354352 CFTRP13569 1480 aa27.35■■□□□ 1.97
SLC11A1-202ENST00000354352 CSRNP3Q8WYN3 585 aa27.35■■□□□ 1.97
SLC11A1-202ENST00000354352 TOP2BQ02880 1626 aa27.29■■□□□ 1.96
SLC11A1-202ENST00000354352 TRIM26Q12899 539 aaPredicted RBP27.26■■□□□ 1.96
SLC11A1-202ENST00000354352 BIVM-ERCC5R4GMW8 1640 aa27.22■■□□□ 1.95
SLC11A1-202ENST00000354352 TNIKQ9UKE5 1360 aa27.2■■□□□ 1.94
SLC11A1-202ENST00000354352 CADPSQ9ULU8 1353 aa27.15■■□□□ 1.94
SLC11A1-202ENST00000354352 GOLGA3Q08378 1498 aa27.15■■□□□ 1.94
SLC11A1-202ENST00000354352 CUX1P39880 1505 aa27.13■■□□□ 1.93
SLC11A1-202ENST00000354352 CEP162Q5TB80 1403 aa27.11■■□□□ 1.93
SLC11A1-202ENST00000354352 HRCP23327 699 aa27.1■■□□□ 1.93
SLC11A1-202ENST00000354352 PRDM2Q13029 1718 aa27.1■■□□□ 1.93
SLC11A1-202ENST00000354352 CEP164Q9UPV0 1460 aa27.09■■□□□ 1.93
SLC11A1-202ENST00000354352 KIF21BO75037 1637 aa27.08■■□□□ 1.93
SLC11A1-202ENST00000354352 UBTFP17480 764 aaKnown RBP27.06■■□□□ 1.92
SLC11A1-202ENST00000354352 RAPGEF2Q9Y4G8 1499 aa26.91■■□□□ 1.9
SLC11A1-202ENST00000354352 KIF27Q86VH2 1401 aa26.86■■□□□ 1.89
SLC11A1-202ENST00000354352 PRXQ9BXM0 1461 aa26.84■■□□□ 1.89
SLC11A1-202ENST00000354352 FANCD2Q9BXW9 1451 aa26.84■■□□□ 1.89
SLC11A1-202ENST00000354352 PPARGC1BQ86YN6 1023 aaKnown RBP26.82■■□□□ 1.88
SLC11A1-202ENST00000354352 ERICH3Q5RHP9 1530 aa26.8■■□□□ 1.88
SLC11A1-202ENST00000354352 NESP48681 1621 aa26.77■■□□□ 1.88
SLC11A1-202ENST00000354352 CLIP1P30622 1438 aa26.77■■□□□ 1.88
SLC11A1-202ENST00000354352 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
SLC11A1-202ENST00000354352 LAMC3Q9Y6N6 1575 aa26.7■■□□□ 1.87
SLC11A1-202ENST00000354352 CUX2O14529 1486 aa26.68■■□□□ 1.86
SLC11A1-202ENST00000354352 DNAJC5BQ9UF47 199 aa26.66■■□□□ 1.86
SLC11A1-202ENST00000354352 DNMBPQ6XZF7 1577 aa26.66■■□□□ 1.86
SLC11A1-202ENST00000354352 IGF1RP08069 1367 aa26.62■■□□□ 1.85
SLC11A1-202ENST00000354352 TOPBP1Q92547 1522 aa26.61■■□□□ 1.85
SLC11A1-202ENST00000354352 VPS8Q8N3P4 1428 aa26.6■■□□□ 1.85
SLC11A1-202ENST00000354352 POLA1P09884 1462 aaPredicted RBP26.54■■□□□ 1.84
SLC11A1-202ENST00000354352 PDS5BQ9NTI5 1447 aa26.53■■□□□ 1.84
SLC11A1-202ENST00000354352 RANGAP1P46060 587 aaPredicted RBP26.5■■□□□ 1.83
SLC11A1-202ENST00000354352 ABCA10Q8WWZ4 1543 aa26.5■■□□□ 1.83
SLC11A1-202ENST00000354352 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
SLC11A1-202ENST00000354352 URB2Q14146 1524 aaKnown RBP26.49■■□□□ 1.83
SLC11A1-202ENST00000354352 TTBK1Q5TCY1 1321 aaPredicted RBP26.48■■□□□ 1.83
SLC11A1-202ENST00000354352 CARMIL1Q5VZK9 1371 aa26.47■■□□□ 1.83
SLC11A1-202ENST00000354352 ARAP1Q96P48 1450 aa26.44■■□□□ 1.82
SLC11A1-202ENST00000354352 ZEB1P37275 1124 aaPredicted RBP26.42■■□□□ 1.82
SLC11A1-202ENST00000354352 KIF21AQ7Z4S6 1674 aa26.35■■□□□ 1.81
SLC11A1-202ENST00000354352 APLP2Q06481 763 aa26.33■■□□□ 1.81
SLC11A1-202ENST00000354352 ARHGAP35Q9NRY4 1499 aa26.33■■□□□ 1.81
SLC11A1-202ENST00000354352 WDR97A6NE52 1622 aa26.3■■□□□ 1.8
SLC11A1-202ENST00000354352 CUL7Q14999 1698 aa26.24■■□□□ 1.79
SLC11A1-202ENST00000354352 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
SLC11A1-202ENST00000354352 TDRD9Q8NDG6 1382 aaKnown RBP26.2■■□□□ 1.78
SLC11A1-202ENST00000354352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.17■■□□□ 1.78
SLC11A1-202ENST00000354352 GAPVD1Q14C86 1478 aa26.17■■□□□ 1.78
SLC11A1-202ENST00000354352 MRC2Q9UBG0 1479 aa26.15■■□□□ 1.78
SLC11A1-202ENST00000354352 TARBP1Q13395 1621 aaKnown RBP26.14■■□□□ 1.78
SLC11A1-202ENST00000354352 KANK4Q5T7N3 995 aaPredicted RBP26.09■■□□□ 1.77
SLC11A1-202ENST00000354352 CCER1Q8TC90 406 aaPredicted RBP26.09■■□□□ 1.77
SLC11A1-202ENST00000354352 CTTNBP2Q8WZ74 1663 aa26.01■■□□□ 1.75
SLC11A1-202ENST00000354352 EFCAB5A4FU69 1503 aa26■■□□□ 1.75
SLC11A1-202ENST00000354352 FHAD1B1AJZ9 1412 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms