RNA–Protein interactions for RNA: ENST00000354312.7

RAD17-204, Transcript of RAD17 checkpoint clamp loader component, humanhuman

TSL 1 (best) BASIC

Gene RAD17, Length 2,943 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD17-204ENST00000354312 NISCHQ9Y2I1 1504 aa23.59■■□□□ 1.37
RAD17-204ENST00000354312 CCDC180Q9P1Z9 1646 aa20.3■□□□□ 0.84
RAD17-204ENST00000354312 DCAF8L2P0C7V8 631 aa20.02■□□□□ 0.79
RAD17-204ENST00000354312 SHROOM4Q9ULL8 1493 aa19.84■□□□□ 0.77
RAD17-204ENST00000354312 ZCCHC6Q5VYS8 1495 aaKnown RBP19.8■□□□□ 0.76
RAD17-204ENST00000354312 ABCC9O60706 1549 aa19.65■□□□□ 0.74
RAD17-204ENST00000354312 DCAF1Q9Y4B6 1507 aa19.23■□□□□ 0.67
RAD17-204ENST00000354312 SCRIBQ14160 1630 aa19.1■□□□□ 0.65
RAD17-204ENST00000354312 SUPT5HO00267 1087 aaKnown RBP19.07■□□□□ 0.64
RAD17-204ENST00000354312 NACADO15069 1562 aa18.95■□□□□ 0.62
RAD17-204ENST00000354312 MYO15BQ96JP2 1530 aa18.91■□□□□ 0.62
RAD17-204ENST00000354312 RB1CC1Q8TDY2 1594 aa18.84■□□□□ 0.61
RAD17-204ENST00000354312 PABPN1Q86U42 306 aaKnown RBP eCLIP18.7■□□□□ 0.58
RAD17-204ENST00000354312 UNC13AQ9UPW8 1703 aa18.61■□□□□ 0.57
RAD17-204ENST00000354312 CECR2Q9BXF3 1484 aa18.56■□□□□ 0.56
RAD17-204ENST00000354312 RSF1Q96T23 1441 aaPredicted RBP18.43■□□□□ 0.54
RAD17-204ENST00000354312 BICRAQ9NZM4 1560 aa18.41■□□□□ 0.54
RAD17-204ENST00000354312 MROH2BQ7Z745 1585 aa18.38■□□□□ 0.53
RAD17-204ENST00000354312 WIZO95785 1651 aa18.26■□□□□ 0.51
RAD17-204ENST00000354312 BAZ1AQ9NRL2 1556 aaPredicted RBP18.15■□□□□ 0.5
RAD17-204ENST00000354312 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
RAD17-204ENST00000354312 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.49
RAD17-204ENST00000354312 TOP2AP11388 1531 aaKnown RBP17.86■□□□□ 0.45
RAD17-204ENST00000354312 ATAD2BQ9ULI0 1458 aa17.85■□□□□ 0.45
RAD17-204ENST00000354312 EIF4G1Q04637 1599 aaKnown RBP17.85■□□□□ 0.45
RAD17-204ENST00000354312 CCDC88BA6NC98 1476 aa17.83■□□□□ 0.45
RAD17-204ENST00000354312 SMARCA2P51531 1590 aa17.78■□□□□ 0.44
RAD17-204ENST00000354312 BAZ1BQ9UIG0 1483 aaKnown RBP17.77■□□□□ 0.44
RAD17-204ENST00000354312 TRIM41Q8WV44 630 aa17.73■□□□□ 0.43
RAD17-204ENST00000354312 PEG3Q9GZU2 1588 aa17.72■□□□□ 0.43
RAD17-204ENST00000354312 FAM9AQ8IZU1 332 aaPredicted RBP17.7■□□□□ 0.42
RAD17-204ENST00000354312 EHMT2Q96KQ7 1210 aa17.7■□□□□ 0.42
RAD17-204ENST00000354312 LOC105371045A0A1W2PR82 267 aa17.64■□□□□ 0.41
RAD17-204ENST00000354312 ABCC8Q09428 1581 aa17.64■□□□□ 0.41
RAD17-204ENST00000354312 CC2D2AQ9P2K1 1620 aa17.62■□□□□ 0.41
RAD17-204ENST00000354312 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
RAD17-204ENST00000354312 NCAPD3P42695 1498 aa17.57■□□□□ 0.4
RAD17-204ENST00000354312 HMGXB3Q12766 1538 aa17.49■□□□□ 0.39
RAD17-204ENST00000354312 WRNQ14191 1432 aaPredicted RBP eCLIP17.33■□□□□ 0.37
RAD17-204ENST00000354312 SOGA1O94964 1423 aa17.31■□□□□ 0.36
RAD17-204ENST00000354312 SYNJ1O43426 1573 aa17.31■□□□□ 0.36
RAD17-204ENST00000354312 NESP48681 1621 aa17.3■□□□□ 0.36
RAD17-204ENST00000354312 RUSC2Q8N2Y8 1516 aa17.3■□□□□ 0.36
RAD17-204ENST00000354312 CFTRP13569 1480 aa17.25■□□□□ 0.35
RAD17-204ENST00000354312 CADPSQ9ULU8 1353 aa17.23■□□□□ 0.35
RAD17-204ENST00000354312 CUX1P39880 1505 aa17.14■□□□□ 0.33
RAD17-204ENST00000354312 FANCD2Q9BXW9 1451 aa17.08■□□□□ 0.33
RAD17-204ENST00000354312 TOP2BQ02880 1626 aa17.07■□□□□ 0.32
RAD17-204ENST00000354312 CSRNP3Q8WYN3 585 aa17.07■□□□□ 0.32
RAD17-204ENST00000354312 RANGAP1P46060 587 aaPredicted RBP17.06■□□□□ 0.32
RAD17-204ENST00000354312 UBTFP17480 764 aaKnown RBP17.02■□□□□ 0.32
RAD17-204ENST00000354312 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
RAD17-204ENST00000354312 PPARGC1BQ86YN6 1023 aaKnown RBP17■□□□□ 0.31
RAD17-204ENST00000354312 BIVM-ERCC5R4GMW8 1640 aa17■□□□□ 0.31
RAD17-204ENST00000354312 FGD5Q6ZNL6 1462 aa16.95■□□□□ 0.3
RAD17-204ENST00000354312 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
RAD17-204ENST00000354312 LAMC3Q9Y6N6 1575 aa16.93■□□□□ 0.3
RAD17-204ENST00000354312 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
RAD17-204ENST00000354312 KIF21AQ7Z4S6 1674 aa16.92■□□□□ 0.3
RAD17-204ENST00000354312 TTBK1Q5TCY1 1321 aaPredicted RBP16.9■□□□□ 0.3
RAD17-204ENST00000354312 URB2Q14146 1524 aaKnown RBP16.9■□□□□ 0.3
RAD17-204ENST00000354312 RAPGEF2Q9Y4G8 1499 aa16.9■□□□□ 0.3
RAD17-204ENST00000354312 CUX2O14529 1486 aa16.89■□□□□ 0.29
RAD17-204ENST00000354312 TOPBP1Q92547 1522 aa16.88■□□□□ 0.29
RAD17-204ENST00000354312 EEA1Q15075 1411 aa16.88■□□□□ 0.29
RAD17-204ENST00000354312 PCGF6Q9BYE7 350 aa16.87■□□□□ 0.29
RAD17-204ENST00000354312 PDS5BQ9NTI5 1447 aa16.87■□□□□ 0.29
RAD17-204ENST00000354312 POLA1P09884 1462 aaPredicted RBP16.85■□□□□ 0.29
RAD17-204ENST00000354312 KIF27Q86VH2 1401 aa16.83■□□□□ 0.28
RAD17-204ENST00000354312 GOLGA3Q08378 1498 aa16.83■□□□□ 0.28
RAD17-204ENST00000354312 CEP162Q5TB80 1403 aa16.83■□□□□ 0.28
RAD17-204ENST00000354312 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
RAD17-204ENST00000354312 TDRD9Q8NDG6 1382 aaKnown RBP16.79■□□□□ 0.28
RAD17-204ENST00000354312 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.28
RAD17-204ENST00000354312 IGF1RP08069 1367 aa16.75■□□□□ 0.27
RAD17-204ENST00000354312 ERCC6Q03468 1493 aa16.74■□□□□ 0.27
RAD17-204ENST00000354312 KIF21BO75037 1637 aa16.74■□□□□ 0.27
RAD17-204ENST00000354312 PRXQ9BXM0 1461 aa16.72■□□□□ 0.27
RAD17-204ENST00000354312 CARMIL1Q5VZK9 1371 aa16.67■□□□□ 0.26
RAD17-204ENST00000354312 ABCA10Q8WWZ4 1543 aa16.67■□□□□ 0.26
RAD17-204ENST00000354312 MRC2Q9UBG0 1479 aa16.67■□□□□ 0.26
RAD17-204ENST00000354312 CLIP1P30622 1438 aa16.66■□□□□ 0.26
RAD17-204ENST00000354312 AQRO60306 1485 aaKnown RBP eCLIP16.65■□□□□ 0.26
RAD17-204ENST00000354312 P3H3Q8IVL6 736 aa16.62■□□□□ 0.25
RAD17-204ENST00000354312 ZNF608Q9ULD9 1512 aaPredicted RBP16.61■□□□□ 0.25
RAD17-204ENST00000354312 GAPVD1Q14C86 1478 aa16.59■□□□□ 0.25
RAD17-204ENST00000354312 ERICH3Q5RHP9 1530 aa16.58■□□□□ 0.25
RAD17-204ENST00000354312 TARBP1Q13395 1621 aaKnown RBP16.58■□□□□ 0.24
RAD17-204ENST00000354312 WDR97A6NE52 1622 aa16.57■□□□□ 0.24
RAD17-204ENST00000354312 TRIM26Q12899 539 aaPredicted RBP16.56■□□□□ 0.24
RAD17-204ENST00000354312 WDR62O43379 1518 aa16.53■□□□□ 0.24
RAD17-204ENST00000354312 ABCA5Q8WWZ7 1642 aa16.53■□□□□ 0.24
RAD17-204ENST00000354312 THOC2Q8NI27 1593 aaKnown RBP16.52■□□□□ 0.24
RAD17-204ENST00000354312 ARAP1Q96P48 1450 aa16.5■□□□□ 0.23
RAD17-204ENST00000354312 FBLN2P98095 1184 aa16.47■□□□□ 0.23
RAD17-204ENST00000354312 ARHGAP35Q9NRY4 1499 aa16.47■□□□□ 0.23
RAD17-204ENST00000354312 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
RAD17-204ENST00000354312 ATP1B4Q9UN42 357 aaPredicted RBP16.45■□□□□ 0.22
RAD17-204ENST00000354312 IFT140Q96RY7 1462 aa16.43■□□□□ 0.22
RAD17-204ENST00000354312 PBRM1Q86U86 1689 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms