RNA–Protein interactions for RNA: ENST00000352460.7

HPS5-202, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, humanhuman

TSL 5

Gene HPS5, Length 1,642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5-202ENST00000352460 NISCHQ9Y2I1 1504 aa27.83■■■□□ 2.05
HPS5-202ENST00000352460 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
HPS5-202ENST00000352460 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
HPS5-202ENST00000352460 DCAF1Q9Y4B6 1507 aa23.04■■□□□ 1.28
HPS5-202ENST00000352460 SHROOM4Q9ULL8 1493 aa22.99■■□□□ 1.27
HPS5-202ENST00000352460 DCAF8L2P0C7V8 631 aa22.74■■□□□ 1.23
HPS5-202ENST00000352460 MYO15BQ96JP2 1530 aa22.59■■□□□ 1.21
HPS5-202ENST00000352460 SUPT5HO00267 1087 aaKnown RBP22.36■■□□□ 1.17
HPS5-202ENST00000352460 NACADO15069 1562 aa22.28■■□□□ 1.16
HPS5-202ENST00000352460 ABCC9O60706 1549 aa22.26■■□□□ 1.15
HPS5-202ENST00000352460 SCRIBQ14160 1630 aa22.17■■□□□ 1.14
HPS5-202ENST00000352460 RB1CC1Q8TDY2 1594 aa21.97■■□□□ 1.11
HPS5-202ENST00000352460 RSF1Q96T23 1441 aaPredicted RBP21.77■■□□□ 1.08
HPS5-202ENST00000352460 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
HPS5-202ENST00000352460 CECR2Q9BXF3 1484 aa21.56■■□□□ 1.04
HPS5-202ENST00000352460 UNC13AQ9UPW8 1703 aa21.55■■□□□ 1.04
HPS5-202ENST00000352460 MROH2BQ7Z745 1585 aa21.51■■□□□ 1.03
HPS5-202ENST00000352460 BAZ1AQ9NRL2 1556 aaPredicted RBP21.46■■□□□ 1.03
HPS5-202ENST00000352460 WIZO95785 1651 aa21.36■■□□□ 1.01
HPS5-202ENST00000352460 SMARCA4P51532 1647 aa21.3■■□□□ 1
HPS5-202ENST00000352460 BICRAQ9NZM4 1560 aa21.3■■□□□ 1
HPS5-202ENST00000352460 TOP2AP11388 1531 aaKnown RBP21.18■□□□□ 0.98
HPS5-202ENST00000352460 PABPN1Q86U42 306 aaKnown RBP eCLIP21.07■□□□□ 0.96
HPS5-202ENST00000352460 EIF4G1Q04637 1599 aaKnown RBP21.04■□□□□ 0.96
HPS5-202ENST00000352460 PEG3Q9GZU2 1588 aa21.04■□□□□ 0.96
HPS5-202ENST00000352460 TRIM41Q8WV44 630 aa21■□□□□ 0.95
HPS5-202ENST00000352460 SMARCA2P51531 1590 aa20.99■□□□□ 0.95
HPS5-202ENST00000352460 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
HPS5-202ENST00000352460 LOC105371045A0A1W2PR82 267 aa20.84■□□□□ 0.93
HPS5-202ENST00000352460 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
HPS5-202ENST00000352460 BAZ1BQ9UIG0 1483 aaKnown RBP20.73■□□□□ 0.91
HPS5-202ENST00000352460 ABCC8Q09428 1581 aa20.66■□□□□ 0.9
HPS5-202ENST00000352460 FAM9AQ8IZU1 332 aaPredicted RBP20.6■□□□□ 0.89
HPS5-202ENST00000352460 HMGXB3Q12766 1538 aa20.59■□□□□ 0.89
HPS5-202ENST00000352460 NCAPD3P42695 1498 aa20.55■□□□□ 0.88
HPS5-202ENST00000352460 WRNQ14191 1432 aaPredicted RBP eCLIP20.48■□□□□ 0.87
HPS5-202ENST00000352460 EEA1Q15075 1411 aa20.48■□□□□ 0.87
HPS5-202ENST00000352460 PCGF6Q9BYE7 350 aa20.42■□□□□ 0.86
HPS5-202ENST00000352460 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
HPS5-202ENST00000352460 SOGA1O94964 1423 aa20.36■□□□□ 0.85
HPS5-202ENST00000352460 TRIM26Q12899 539 aaPredicted RBP20.34■□□□□ 0.85
HPS5-202ENST00000352460 TOP2BQ02880 1626 aa20.28■□□□□ 0.84
HPS5-202ENST00000352460 HRCP23327 699 aa20.27■□□□□ 0.84
HPS5-202ENST00000352460 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
HPS5-202ENST00000352460 CSRNP3Q8WYN3 585 aa20.26■□□□□ 0.83
HPS5-202ENST00000352460 BIVM-ERCC5R4GMW8 1640 aa20.25■□□□□ 0.83
HPS5-202ENST00000352460 RUSC2Q8N2Y8 1516 aa20.25■□□□□ 0.83
HPS5-202ENST00000352460 CFTRP13569 1480 aa20.24■□□□□ 0.83
HPS5-202ENST00000352460 TNIKQ9UKE5 1360 aa20.23■□□□□ 0.83
HPS5-202ENST00000352460 GOLGA3Q08378 1498 aa20.2■□□□□ 0.82
HPS5-202ENST00000352460 PRDM2Q13029 1718 aa20.2■□□□□ 0.82
HPS5-202ENST00000352460 KIF21BO75037 1637 aa20.19■□□□□ 0.82
HPS5-202ENST00000352460 CC2D2AQ9P2K1 1620 aa20.18■□□□□ 0.82
HPS5-202ENST00000352460 CEP164Q9UPV0 1460 aa20.16■□□□□ 0.82
HPS5-202ENST00000352460 CEP162Q5TB80 1403 aa20.16■□□□□ 0.82
HPS5-202ENST00000352460 CUX1P39880 1505 aa20.09■□□□□ 0.81
HPS5-202ENST00000352460 CADPSQ9ULU8 1353 aa20.05■□□□□ 0.8
HPS5-202ENST00000352460 UBTFP17480 764 aaKnown RBP20.03■□□□□ 0.8
HPS5-202ENST00000352460 ERICH3Q5RHP9 1530 aa19.96■□□□□ 0.79
HPS5-202ENST00000352460 RAPGEF2Q9Y4G8 1499 aa19.95■□□□□ 0.78
HPS5-202ENST00000352460 KIF27Q86VH2 1401 aa19.92■□□□□ 0.78
HPS5-202ENST00000352460 PRXQ9BXM0 1461 aa19.92■□□□□ 0.78
HPS5-202ENST00000352460 CLIP1P30622 1438 aa19.88■□□□□ 0.77
HPS5-202ENST00000352460 FANCD2Q9BXW9 1451 aa19.84■□□□□ 0.77
HPS5-202ENST00000352460 ZEB1P37275 1124 aaPredicted RBP19.8■□□□□ 0.76
HPS5-202ENST00000352460 PPARGC1BQ86YN6 1023 aaKnown RBP19.8■□□□□ 0.76
HPS5-202ENST00000352460 FGD5Q6ZNL6 1462 aa19.79■□□□□ 0.76
HPS5-202ENST00000352460 VPS8Q8N3P4 1428 aa19.79■□□□□ 0.76
HPS5-202ENST00000352460 LAMC3Q9Y6N6 1575 aa19.79■□□□□ 0.76
HPS5-202ENST00000352460 DNMBPQ6XZF7 1577 aa19.77■□□□□ 0.76
HPS5-202ENST00000352460 CUX2O14529 1486 aa19.75■□□□□ 0.75
HPS5-202ENST00000352460 NESP48681 1621 aa19.7■□□□□ 0.74
HPS5-202ENST00000352460 TOPBP1Q92547 1522 aa19.69■□□□□ 0.74
HPS5-202ENST00000352460 IGF1RP08069 1367 aa19.67■□□□□ 0.74
HPS5-202ENST00000352460 ABCA10Q8WWZ4 1543 aa19.64■□□□□ 0.73
HPS5-202ENST00000352460 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
HPS5-202ENST00000352460 POLA1P09884 1462 aaPredicted RBP19.63■□□□□ 0.73
HPS5-202ENST00000352460 PDS5BQ9NTI5 1447 aa19.6■□□□□ 0.73
HPS5-202ENST00000352460 CARMIL1Q5VZK9 1371 aa19.59■□□□□ 0.73
HPS5-202ENST00000352460 APLP2Q06481 763 aa19.57■□□□□ 0.72
HPS5-202ENST00000352460 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
HPS5-202ENST00000352460 TTBK1Q5TCY1 1321 aaPredicted RBP19.55■□□□□ 0.72
HPS5-202ENST00000352460 WDR97A6NE52 1622 aa19.55■□□□□ 0.72
HPS5-202ENST00000352460 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
HPS5-202ENST00000352460 ARHGAP35Q9NRY4 1499 aa19.53■□□□□ 0.72
HPS5-202ENST00000352460 CUL7Q14999 1698 aa19.53■□□□□ 0.72
HPS5-202ENST00000352460 RANGAP1P46060 587 aaPredicted RBP19.52■□□□□ 0.72
HPS5-202ENST00000352460 KIF21AQ7Z4S6 1674 aa19.5■□□□□ 0.71
HPS5-202ENST00000352460 DNAJC5BQ9UF47 199 aa19.45■□□□□ 0.7
HPS5-202ENST00000352460 ABCA5Q8WWZ7 1642 aa19.45■□□□□ 0.7
HPS5-202ENST00000352460 CCER1Q8TC90 406 aaPredicted RBP19.43■□□□□ 0.7
HPS5-202ENST00000352460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.43■□□□□ 0.7
HPS5-202ENST00000352460 CTTNBP2Q8WZ74 1663 aa19.38■□□□□ 0.69
HPS5-202ENST00000352460 MAP3K1Q13233 1512 aa19.38■□□□□ 0.69
HPS5-202ENST00000352460 EFCAB5A4FU69 1503 aa19.36■□□□□ 0.69
HPS5-202ENST00000352460 TARBP1Q13395 1621 aaKnown RBP19.36■□□□□ 0.69
HPS5-202ENST00000352460 GAPVD1Q14C86 1478 aa19.36■□□□□ 0.69
HPS5-202ENST00000352460 FHAD1B1AJZ9 1412 aa19.33■□□□□ 0.69
HPS5-202ENST00000352460 MRC2Q9UBG0 1479 aa19.33■□□□□ 0.68
HPS5-202ENST00000352460 TIAM1Q13009 1591 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms