RNA–Protein interactions for RNA: ENST00000345868.8

SPO11-201, Transcript of SPO11, initiator of meiotic double stranded breaks, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPO11, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPO11-201ENST00000345868 NISCHQ9Y2I1 1504 aa29.55■■■□□ 2.32
SPO11-201ENST00000345868 CCDC180Q9P1Z9 1646 aa25.72■■□□□ 1.71
SPO11-201ENST00000345868 ZCCHC6Q5VYS8 1495 aaKnown RBP24.83■■□□□ 1.57
SPO11-201ENST00000345868 ABCC9O60706 1549 aa24.45■■□□□ 1.5
SPO11-201ENST00000345868 DCAF1Q9Y4B6 1507 aa24.43■■□□□ 1.5
SPO11-201ENST00000345868 DCAF8L2P0C7V8 631 aa24.43■■□□□ 1.5
SPO11-201ENST00000345868 MYO15BQ96JP2 1530 aa24.16■■□□□ 1.46
SPO11-201ENST00000345868 SHROOM4Q9ULL8 1493 aa24.1■■□□□ 1.45
SPO11-201ENST00000345868 NACADO15069 1562 aa24.01■■□□□ 1.43
SPO11-201ENST00000345868 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
SPO11-201ENST00000345868 SCRIBQ14160 1630 aa23.69■■□□□ 1.38
SPO11-201ENST00000345868 UNC13AQ9UPW8 1703 aa23.24■■□□□ 1.31
SPO11-201ENST00000345868 SUPT5HO00267 1087 aaKnown RBP23.15■■□□□ 1.3
SPO11-201ENST00000345868 BICRAQ9NZM4 1560 aa23.11■■□□□ 1.29
SPO11-201ENST00000345868 PABPN1Q86U42 306 aaKnown RBP eCLIP23.07■■□□□ 1.28
SPO11-201ENST00000345868 CECR2Q9BXF3 1484 aa22.99■■□□□ 1.27
SPO11-201ENST00000345868 RSF1Q96T23 1441 aaPredicted RBP22.93■■□□□ 1.26
SPO11-201ENST00000345868 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
SPO11-201ENST00000345868 BAZ1AQ9NRL2 1556 aaPredicted RBP22.81■■□□□ 1.24
SPO11-201ENST00000345868 SMARCA4P51532 1647 aa22.7■■□□□ 1.22
SPO11-201ENST00000345868 WIZO95785 1651 aa22.6■■□□□ 1.21
SPO11-201ENST00000345868 AEBP2Q6ZN18 517 aaPredicted RBP22.58■■□□□ 1.21
SPO11-201ENST00000345868 PEG3Q9GZU2 1588 aa22.44■■□□□ 1.18
SPO11-201ENST00000345868 EIF4G1Q04637 1599 aaKnown RBP22.42■■□□□ 1.18
SPO11-201ENST00000345868 TOP2AP11388 1531 aaKnown RBP22.4■■□□□ 1.18
SPO11-201ENST00000345868 ATAD2BQ9ULI0 1458 aa22.38■■□□□ 1.17
SPO11-201ENST00000345868 SMARCA2P51531 1590 aa22.34■■□□□ 1.17
SPO11-201ENST00000345868 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
SPO11-201ENST00000345868 NCAPD3P42695 1498 aa22.2■■□□□ 1.14
SPO11-201ENST00000345868 CCDC88BA6NC98 1476 aa22.19■■□□□ 1.14
SPO11-201ENST00000345868 HMGXB3Q12766 1538 aa22.15■■□□□ 1.14
SPO11-201ENST00000345868 CHIC1Q5VXU3 224 aa22.14■■□□□ 1.14
SPO11-201ENST00000345868 CC2D2AQ9P2K1 1620 aa22.09■■□□□ 1.13
SPO11-201ENST00000345868 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
SPO11-201ENST00000345868 CFTRP13569 1480 aa21.69■■□□□ 1.06
SPO11-201ENST00000345868 ABCC8Q09428 1581 aa21.68■■□□□ 1.06
SPO11-201ENST00000345868 CADPSQ9ULU8 1353 aa21.63■■□□□ 1.05
SPO11-201ENST00000345868 DNAJC5BQ9UF47 199 aa21.63■■□□□ 1.05
SPO11-201ENST00000345868 WRNQ14191 1432 aaPredicted RBP eCLIP21.58■■□□□ 1.04
SPO11-201ENST00000345868 SYNJ1O43426 1573 aa21.47■■□□□ 1.03
SPO11-201ENST00000345868 NESP48681 1621 aa21.45■■□□□ 1.02
SPO11-201ENST00000345868 PRDM2Q13029 1718 aa21.43■■□□□ 1.02
SPO11-201ENST00000345868 LAMC3Q9Y6N6 1575 aa21.41■■□□□ 1.02
SPO11-201ENST00000345868 FANCD2Q9BXW9 1451 aa21.39■■□□□ 1.01
SPO11-201ENST00000345868 TOP2BQ02880 1626 aa21.37■■□□□ 1.01
SPO11-201ENST00000345868 FAM9AQ8IZU1 332 aaPredicted RBP21.37■■□□□ 1.01
SPO11-201ENST00000345868 CUX1P39880 1505 aa21.35■■□□□ 1.01
SPO11-201ENST00000345868 BIVM-ERCC5R4GMW8 1640 aa21.33■■□□□ 1
SPO11-201ENST00000345868 SOGA1O94964 1423 aa21.3■■□□□ 1
SPO11-201ENST00000345868 LOC105371045A0A1W2PR82 267 aa21.29■■□□□ 1
SPO11-201ENST00000345868 PDS5BQ9NTI5 1447 aa21.28■■□□□ 1
SPO11-201ENST00000345868 CEP164Q9UPV0 1460 aa21.25■□□□□ 0.99
SPO11-201ENST00000345868 EEA1Q15075 1411 aa21.23■□□□□ 0.99
SPO11-201ENST00000345868 RUSC2Q8N2Y8 1516 aa21.21■□□□□ 0.99
SPO11-201ENST00000345868 DNMBPQ6XZF7 1577 aa21.16■□□□□ 0.98
SPO11-201ENST00000345868 TOPBP1Q92547 1522 aa21.14■□□□□ 0.97
SPO11-201ENST00000345868 CSRNP3Q8WYN3 585 aa21.13■□□□□ 0.97
SPO11-201ENST00000345868 URB2Q14146 1524 aaKnown RBP21.13■□□□□ 0.97
SPO11-201ENST00000345868 FGD5Q6ZNL6 1462 aa21.13■□□□□ 0.97
SPO11-201ENST00000345868 KIF21AQ7Z4S6 1674 aa21.11■□□□□ 0.97
SPO11-201ENST00000345868 EHMT2Q96KQ7 1210 aa21.07■□□□□ 0.96
SPO11-201ENST00000345868 POLA1P09884 1462 aaPredicted RBP21.05■□□□□ 0.96
SPO11-201ENST00000345868 KIF27Q86VH2 1401 aa21.03■□□□□ 0.96
SPO11-201ENST00000345868 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
SPO11-201ENST00000345868 CUX2O14529 1486 aa20.99■□□□□ 0.95
SPO11-201ENST00000345868 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
SPO11-201ENST00000345868 ERCC6Q03468 1493 aa20.96■□□□□ 0.95
SPO11-201ENST00000345868 ABCA10Q8WWZ4 1543 aa20.94■□□□□ 0.94
SPO11-201ENST00000345868 GOLGA3Q08378 1498 aa20.94■□□□□ 0.94
SPO11-201ENST00000345868 KIF21BO75037 1637 aa20.93■□□□□ 0.94
SPO11-201ENST00000345868 WDR62O43379 1518 aa20.89■□□□□ 0.94
SPO11-201ENST00000345868 PRXQ9BXM0 1461 aa20.89■□□□□ 0.93
SPO11-201ENST00000345868 IGF1RP08069 1367 aa20.87■□□□□ 0.93
SPO11-201ENST00000345868 TNIKQ9UKE5 1360 aa20.87■□□□□ 0.93
SPO11-201ENST00000345868 RAPGEF2Q9Y4G8 1499 aa20.86■□□□□ 0.93
SPO11-201ENST00000345868 UBTFP17480 764 aaKnown RBP20.84■□□□□ 0.93
SPO11-201ENST00000345868 THOC2Q8NI27 1593 aaKnown RBP20.83■□□□□ 0.92
SPO11-201ENST00000345868 WDR97A6NE52 1622 aa20.82■□□□□ 0.92
SPO11-201ENST00000345868 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
SPO11-201ENST00000345868 TARBP1Q13395 1621 aaKnown RBP20.8■□□□□ 0.92
SPO11-201ENST00000345868 TDRD9Q8NDG6 1382 aaKnown RBP20.79■□□□□ 0.92
SPO11-201ENST00000345868 CEP162Q5TB80 1403 aa20.76■□□□□ 0.91
SPO11-201ENST00000345868 IFT140Q96RY7 1462 aa20.75■□□□□ 0.91
SPO11-201ENST00000345868 CARMIL1Q5VZK9 1371 aa20.75■□□□□ 0.91
SPO11-201ENST00000345868 ABCA5Q8WWZ7 1642 aa20.75■□□□□ 0.91
SPO11-201ENST00000345868 GAPVD1Q14C86 1478 aa20.74■□□□□ 0.91
SPO11-201ENST00000345868 AQRO60306 1485 aaKnown RBP eCLIP20.66■□□□□ 0.9
SPO11-201ENST00000345868 ZNF608Q9ULD9 1512 aaPredicted RBP20.65■□□□□ 0.9
SPO11-201ENST00000345868 CUL7Q14999 1698 aa20.64■□□□□ 0.9
SPO11-201ENST00000345868 CLIP1P30622 1438 aa20.61■□□□□ 0.89
SPO11-201ENST00000345868 GRIN2BQ13224 1484 aa20.59■□□□□ 0.89
SPO11-201ENST00000345868 PBRM1Q86U86 1689 aa20.54■□□□□ 0.88
SPO11-201ENST00000345868 EIF4G3O43432 1585 aaKnown RBP20.54■□□□□ 0.88
SPO11-201ENST00000345868 RANGAP1P46060 587 aaPredicted RBP20.53■□□□□ 0.88
SPO11-201ENST00000345868 FHAD1B1AJZ9 1412 aa20.53■□□□□ 0.88
SPO11-201ENST00000345868 ADAMTS12P58397 1594 aa20.5■□□□□ 0.87
SPO11-201ENST00000345868 SNAPC4Q5SXM2 1469 aa20.46■□□□□ 0.87
SPO11-201ENST00000345868 VPS8Q8N3P4 1428 aa20.42■□□□□ 0.86
SPO11-201ENST00000345868 ARAP1Q96P48 1450 aa20.42■□□□□ 0.86
SPO11-201ENST00000345868 ARHGAP35Q9NRY4 1499 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms