RNA–Protein interactions for RNA: ENST00000342943.3

SUSD4-201, Transcript of sushi domain containing 4, humanhuman

TSL 3

Gene SUSD4, Length 727 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD4-201ENST00000342943 NISCHQ9Y2I1 1504 aa24.63■■□□□ 1.53
SUSD4-201ENST00000342943 CCDC180Q9P1Z9 1646 aa21.62■■□□□ 1.05
SUSD4-201ENST00000342943 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
SUSD4-201ENST00000342943 DCAF1Q9Y4B6 1507 aa20.48■□□□□ 0.87
SUSD4-201ENST00000342943 ABCC9O60706 1549 aa20.35■□□□□ 0.85
SUSD4-201ENST00000342943 MYO15BQ96JP2 1530 aa20.31■□□□□ 0.84
SUSD4-201ENST00000342943 DCAF8L2P0C7V8 631 aa20.26■□□□□ 0.83
SUSD4-201ENST00000342943 NACADO15069 1562 aa20.16■□□□□ 0.82
SUSD4-201ENST00000342943 RB1CC1Q8TDY2 1594 aa20■□□□□ 0.79
SUSD4-201ENST00000342943 SHROOM4Q9ULL8 1493 aa19.86■□□□□ 0.77
SUSD4-201ENST00000342943 SCRIBQ14160 1630 aa19.72■□□□□ 0.75
SUSD4-201ENST00000342943 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
SUSD4-201ENST00000342943 BICRAQ9NZM4 1560 aa19.23■□□□□ 0.67
SUSD4-201ENST00000342943 SUPT5HO00267 1087 aaKnown RBP19.11■□□□□ 0.65
SUSD4-201ENST00000342943 PABPN1Q86U42 306 aaKnown RBP eCLIP19.1■□□□□ 0.65
SUSD4-201ENST00000342943 BAZ1AQ9NRL2 1556 aaPredicted RBP19.1■□□□□ 0.65
SUSD4-201ENST00000342943 RSF1Q96T23 1441 aaPredicted RBP19.03■□□□□ 0.64
SUSD4-201ENST00000342943 CECR2Q9BXF3 1484 aa19.02■□□□□ 0.63
SUSD4-201ENST00000342943 SMARCA4P51532 1647 aa18.95■□□□□ 0.62
SUSD4-201ENST00000342943 MROH2BQ7Z745 1585 aa18.94■□□□□ 0.62
SUSD4-201ENST00000342943 PEG3Q9GZU2 1588 aa18.78■□□□□ 0.6
SUSD4-201ENST00000342943 WIZO95785 1651 aa18.76■□□□□ 0.59
SUSD4-201ENST00000342943 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
SUSD4-201ENST00000342943 EIF4G1Q04637 1599 aaKnown RBP18.74■□□□□ 0.59
SUSD4-201ENST00000342943 TOP2AP11388 1531 aaKnown RBP18.7■□□□□ 0.58
SUSD4-201ENST00000342943 ATAD2BQ9ULI0 1458 aa18.66■□□□□ 0.58
SUSD4-201ENST00000342943 BAZ1BQ9UIG0 1483 aaKnown RBP18.59■□□□□ 0.57
SUSD4-201ENST00000342943 HMGXB3Q12766 1538 aa18.57■□□□□ 0.56
SUSD4-201ENST00000342943 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
SUSD4-201ENST00000342943 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
SUSD4-201ENST00000342943 CCDC88BA6NC98 1476 aa18.42■□□□□ 0.54
SUSD4-201ENST00000342943 CHIC1Q5VXU3 224 aa18.26■□□□□ 0.51
SUSD4-201ENST00000342943 CFTRP13569 1480 aa18.1■□□□□ 0.49
SUSD4-201ENST00000342943 TRIM41Q8WV44 630 aa18.08■□□□□ 0.48
SUSD4-201ENST00000342943 CADPSQ9ULU8 1353 aa18.06■□□□□ 0.48
SUSD4-201ENST00000342943 PRDM2Q13029 1718 aa18.03■□□□□ 0.48
SUSD4-201ENST00000342943 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
SUSD4-201ENST00000342943 LAMC3Q9Y6N6 1575 aa17.98■□□□□ 0.47
SUSD4-201ENST00000342943 ABCC8Q09428 1581 aa17.95■□□□□ 0.46
SUSD4-201ENST00000342943 PDS5BQ9NTI5 1447 aa17.86■□□□□ 0.45
SUSD4-201ENST00000342943 FANCD2Q9BXW9 1451 aa17.85■□□□□ 0.45
SUSD4-201ENST00000342943 DNAJC5BQ9UF47 199 aa17.85■□□□□ 0.45
SUSD4-201ENST00000342943 TOP2BQ02880 1626 aa17.84■□□□□ 0.45
SUSD4-201ENST00000342943 BIVM-ERCC5R4GMW8 1640 aa17.83■□□□□ 0.44
SUSD4-201ENST00000342943 SYNJ1O43426 1573 aa17.82■□□□□ 0.44
SUSD4-201ENST00000342943 EEA1Q15075 1411 aa17.81■□□□□ 0.44
SUSD4-201ENST00000342943 CEP164Q9UPV0 1460 aa17.79■□□□□ 0.44
SUSD4-201ENST00000342943 NESP48681 1621 aa17.78■□□□□ 0.44
SUSD4-201ENST00000342943 CUX1P39880 1505 aa17.74■□□□□ 0.43
SUSD4-201ENST00000342943 DNMBPQ6XZF7 1577 aa17.7■□□□□ 0.42
SUSD4-201ENST00000342943 TOPBP1Q92547 1522 aa17.63■□□□□ 0.41
SUSD4-201ENST00000342943 KIF21AQ7Z4S6 1674 aa17.62■□□□□ 0.41
SUSD4-201ENST00000342943 FAM9AQ8IZU1 332 aaPredicted RBP17.6■□□□□ 0.41
SUSD4-201ENST00000342943 SOGA1O94964 1423 aa17.6■□□□□ 0.41
SUSD4-201ENST00000342943 FGD5Q6ZNL6 1462 aa17.6■□□□□ 0.41
SUSD4-201ENST00000342943 MRC2Q9UBG0 1479 aa17.6■□□□□ 0.41
SUSD4-201ENST00000342943 KIF27Q86VH2 1401 aa17.58■□□□□ 0.41
SUSD4-201ENST00000342943 ERCC6Q03468 1493 aa17.57■□□□□ 0.4
SUSD4-201ENST00000342943 URB2Q14146 1524 aaKnown RBP17.57■□□□□ 0.4
SUSD4-201ENST00000342943 CSRNP3Q8WYN3 585 aa17.56■□□□□ 0.4
SUSD4-201ENST00000342943 POLA1P09884 1462 aaPredicted RBP17.53■□□□□ 0.4
SUSD4-201ENST00000342943 ABCA10Q8WWZ4 1543 aa17.5■□□□□ 0.39
SUSD4-201ENST00000342943 WDR62O43379 1518 aa17.49■□□□□ 0.39
SUSD4-201ENST00000342943 CUX2O14529 1486 aa17.48■□□□□ 0.39
SUSD4-201ENST00000342943 RUSC2Q8N2Y8 1516 aa17.47■□□□□ 0.39
SUSD4-201ENST00000342943 KIF21BO75037 1637 aa17.47■□□□□ 0.39
SUSD4-201ENST00000342943 GOLGA3Q08378 1498 aa17.47■□□□□ 0.39
SUSD4-201ENST00000342943 LOC105371045A0A1W2PR82 267 aa17.45■□□□□ 0.38
SUSD4-201ENST00000342943 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
SUSD4-201ENST00000342943 THOC2Q8NI27 1593 aaKnown RBP17.4■□□□□ 0.38
SUSD4-201ENST00000342943 IFT140Q96RY7 1462 aa17.4■□□□□ 0.38
SUSD4-201ENST00000342943 WDR97A6NE52 1622 aa17.39■□□□□ 0.38
SUSD4-201ENST00000342943 RAD54L2Q9Y4B4 1467 aa17.39■□□□□ 0.37
SUSD4-201ENST00000342943 PRXQ9BXM0 1461 aa17.37■□□□□ 0.37
SUSD4-201ENST00000342943 TNIKQ9UKE5 1360 aa17.37■□□□□ 0.37
SUSD4-201ENST00000342943 TARBP1Q13395 1621 aaKnown RBP17.35■□□□□ 0.37
SUSD4-201ENST00000342943 CUL7Q14999 1698 aa17.32■□□□□ 0.36
SUSD4-201ENST00000342943 ABCA5Q8WWZ7 1642 aa17.32■□□□□ 0.36
SUSD4-201ENST00000342943 IGF1RP08069 1367 aa17.32■□□□□ 0.36
SUSD4-201ENST00000342943 UBTFP17480 764 aaKnown RBP17.32■□□□□ 0.36
SUSD4-201ENST00000342943 GAPVD1Q14C86 1478 aa17.31■□□□□ 0.36
SUSD4-201ENST00000342943 CARMIL1Q5VZK9 1371 aa17.29■□□□□ 0.36
SUSD4-201ENST00000342943 RAPGEF2Q9Y4G8 1499 aa17.29■□□□□ 0.36
SUSD4-201ENST00000342943 EHMT2Q96KQ7 1210 aa17.27■□□□□ 0.36
SUSD4-201ENST00000342943 TDRD9Q8NDG6 1382 aaKnown RBP17.25■□□□□ 0.35
SUSD4-201ENST00000342943 CEP162Q5TB80 1403 aa17.23■□□□□ 0.35
SUSD4-201ENST00000342943 GRIN2BQ13224 1484 aa17.23■□□□□ 0.35
SUSD4-201ENST00000342943 PBRM1Q86U86 1689 aa17.2■□□□□ 0.34
SUSD4-201ENST00000342943 FHAD1B1AJZ9 1412 aa17.17■□□□□ 0.34
SUSD4-201ENST00000342943 EIF4G3O43432 1585 aaKnown RBP17.16■□□□□ 0.34
SUSD4-201ENST00000342943 AQRO60306 1485 aaKnown RBP eCLIP17.15■□□□□ 0.34
SUSD4-201ENST00000342943 CLIP1P30622 1438 aa17.14■□□□□ 0.33
SUSD4-201ENST00000342943 ZNF608Q9ULD9 1512 aaPredicted RBP17.13■□□□□ 0.33
SUSD4-201ENST00000342943 ADAMTS12P58397 1594 aa17.13■□□□□ 0.33
SUSD4-201ENST00000342943 MAGI1Q96QZ7 1491 aaPredicted RBP17.12■□□□□ 0.33
SUSD4-201ENST00000342943 SNAPC4Q5SXM2 1469 aa17.06■□□□□ 0.32
SUSD4-201ENST00000342943 CTTNBP2Q8WZ74 1663 aa17.06■□□□□ 0.32
SUSD4-201ENST00000342943 SYNJ2O15056 1496 aa17.02■□□□□ 0.32
SUSD4-201ENST00000342943 EFCAB5A4FU69 1503 aa17.01■□□□□ 0.31
SUSD4-201ENST00000342943 VPS8Q8N3P4 1428 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms