RNA–Protein interactions for RNA: ENST00000341040.11

LCN10-201, Transcript of lipocalin 10, humanhuman

TSL 1 (best)

Gene LCN10, Length 1,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN10-201ENST00000341040 NISCHQ9Y2I1 1504 aa35.57■■■■□ 3.28
LCN10-201ENST00000341040 CCDC180Q9P1Z9 1646 aa31.38■■■□□ 2.61
LCN10-201ENST00000341040 ABCC9O60706 1549 aa30.45■■■□□ 2.47
LCN10-201ENST00000341040 DCAF8L2P0C7V8 631 aa29.73■■■□□ 2.35
LCN10-201ENST00000341040 ZCCHC6Q5VYS8 1495 aaKnown RBP29.71■■■□□ 2.35
LCN10-201ENST00000341040 NACADO15069 1562 aa29.41■■■□□ 2.3
LCN10-201ENST00000341040 RB1CC1Q8TDY2 1594 aa29.37■■■□□ 2.29
LCN10-201ENST00000341040 DCAF1Q9Y4B6 1507 aa29.36■■■□□ 2.29
LCN10-201ENST00000341040 MYO15BQ96JP2 1530 aa29.3■■■□□ 2.28
LCN10-201ENST00000341040 SCRIBQ14160 1630 aa28.81■■■□□ 2.2
LCN10-201ENST00000341040 UNC13AQ9UPW8 1703 aa28.79■■■□□ 2.2
LCN10-201ENST00000341040 PABPN1Q86U42 306 aaKnown RBP eCLIP28.58■■■□□ 2.17
LCN10-201ENST00000341040 SHROOM4Q9ULL8 1493 aa28.54■■■□□ 2.16
LCN10-201ENST00000341040 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
LCN10-201ENST00000341040 CECR2Q9BXF3 1484 aa27.74■■■□□ 2.03
LCN10-201ENST00000341040 EIF4G1Q04637 1599 aaKnown RBP27.71■■■□□ 2.03
LCN10-201ENST00000341040 DNAJC5BQ9UF47 199 aa27.61■■■□□ 2.01
LCN10-201ENST00000341040 SMARCA4P51532 1647 aa27.52■■■□□ 2
LCN10-201ENST00000341040 BAZ1AQ9NRL2 1556 aaPredicted RBP27.52■■■□□ 2
LCN10-201ENST00000341040 CC2D2AQ9P2K1 1620 aa27.51■■■□□ 2
LCN10-201ENST00000341040 MROH2BQ7Z745 1585 aa27.48■■□□□ 1.99
LCN10-201ENST00000341040 RSF1Q96T23 1441 aaPredicted RBP27.29■■□□□ 1.96
LCN10-201ENST00000341040 ATAD2BQ9ULI0 1458 aa27.26■■□□□ 1.96
LCN10-201ENST00000341040 WIZO95785 1651 aa27.23■■□□□ 1.95
LCN10-201ENST00000341040 SMARCA2P51531 1590 aa27.21■■□□□ 1.95
LCN10-201ENST00000341040 PEG3Q9GZU2 1588 aa27.17■■□□□ 1.94
LCN10-201ENST00000341040 NCAPD3P42695 1498 aa27.14■■□□□ 1.94
LCN10-201ENST00000341040 BAZ1BQ9UIG0 1483 aaKnown RBP27.07■■□□□ 1.92
LCN10-201ENST00000341040 SUPT5HO00267 1087 aaKnown RBP27.06■■□□□ 1.92
LCN10-201ENST00000341040 HMGXB3Q12766 1538 aa27.03■■□□□ 1.92
LCN10-201ENST00000341040 TOP2AP11388 1531 aaKnown RBP26.88■■□□□ 1.89
LCN10-201ENST00000341040 CCDC88BA6NC98 1476 aa26.62■■□□□ 1.85
LCN10-201ENST00000341040 NESP48681 1621 aa26.49■■□□□ 1.83
LCN10-201ENST00000341040 CADPSQ9ULU8 1353 aa26.41■■□□□ 1.82
LCN10-201ENST00000341040 LAMC3Q9Y6N6 1575 aa26.36■■□□□ 1.81
LCN10-201ENST00000341040 CFTRP13569 1480 aa26.33■■□□□ 1.81
LCN10-201ENST00000341040 PDS5BQ9NTI5 1447 aa26.18■■□□□ 1.78
LCN10-201ENST00000341040 ERCC6Q03468 1493 aa26.18■■□□□ 1.78
LCN10-201ENST00000341040 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
LCN10-201ENST00000341040 KIF21AQ7Z4S6 1674 aa26.16■■□□□ 1.78
LCN10-201ENST00000341040 FANCD2Q9BXW9 1451 aa26.13■■□□□ 1.77
LCN10-201ENST00000341040 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
LCN10-201ENST00000341040 THOC2Q8NI27 1593 aaKnown RBP25.92■■□□□ 1.74
LCN10-201ENST00000341040 MRC2Q9UBG0 1479 aa25.9■■□□□ 1.74
LCN10-201ENST00000341040 URB2Q14146 1524 aaKnown RBP25.85■■□□□ 1.73
LCN10-201ENST00000341040 ABCC8Q09428 1581 aa25.83■■□□□ 1.73
LCN10-201ENST00000341040 WDR62O43379 1518 aa25.79■■□□□ 1.72
LCN10-201ENST00000341040 TOPBP1Q92547 1522 aa25.76■■□□□ 1.71
LCN10-201ENST00000341040 CUX1P39880 1505 aa25.74■■□□□ 1.71
LCN10-201ENST00000341040 DNMBPQ6XZF7 1577 aa25.74■■□□□ 1.71
LCN10-201ENST00000341040 WRNQ14191 1432 aaPredicted RBP eCLIP25.71■■□□□ 1.71
LCN10-201ENST00000341040 CUX2O14529 1486 aa25.66■■□□□ 1.7
LCN10-201ENST00000341040 SYNJ1O43426 1573 aa25.66■■□□□ 1.7
LCN10-201ENST00000341040 TOP2BQ02880 1626 aa25.59■■□□□ 1.69
LCN10-201ENST00000341040 BIVM-ERCC5R4GMW8 1640 aa25.58■■□□□ 1.69
LCN10-201ENST00000341040 FGD5Q6ZNL6 1462 aa25.58■■□□□ 1.69
LCN10-201ENST00000341040 POLA1P09884 1462 aaPredicted RBP25.57■■□□□ 1.68
LCN10-201ENST00000341040 RAD54L2Q9Y4B4 1467 aa25.52■■□□□ 1.68
LCN10-201ENST00000341040 SOGA1O94964 1423 aa25.49■■□□□ 1.67
LCN10-201ENST00000341040 TRIM41Q8WV44 630 aa25.46■■□□□ 1.67
LCN10-201ENST00000341040 IFT140Q96RY7 1462 aa25.46■■□□□ 1.67
LCN10-201ENST00000341040 CHIC1Q5VXU3 224 aa25.45■■□□□ 1.66
LCN10-201ENST00000341040 TARBP1Q13395 1621 aaKnown RBP25.43■■□□□ 1.66
LCN10-201ENST00000341040 ZNF608Q9ULD9 1512 aaPredicted RBP25.39■■□□□ 1.65
LCN10-201ENST00000341040 TDRD9Q8NDG6 1382 aaKnown RBP25.33■■□□□ 1.65
LCN10-201ENST00000341040 WDR97A6NE52 1622 aa25.32■■□□□ 1.64
LCN10-201ENST00000341040 ABCA10Q8WWZ4 1543 aa25.31■■□□□ 1.64
LCN10-201ENST00000341040 AQRO60306 1485 aaKnown RBP eCLIP25.31■■□□□ 1.64
LCN10-201ENST00000341040 EIF4G3O43432 1585 aaKnown RBP25.26■■□□□ 1.63
LCN10-201ENST00000341040 GAPVD1Q14C86 1478 aa25.18■■□□□ 1.62
LCN10-201ENST00000341040 ABCA5Q8WWZ7 1642 aa25.18■■□□□ 1.62
LCN10-201ENST00000341040 RUSC2Q8N2Y8 1516 aa25.14■■□□□ 1.61
LCN10-201ENST00000341040 KIF27Q86VH2 1401 aa25.13■■□□□ 1.61
LCN10-201ENST00000341040 PBRM1Q86U86 1689 aa25.12■■□□□ 1.61
LCN10-201ENST00000341040 GRIN2BQ13224 1484 aa25.1■■□□□ 1.61
LCN10-201ENST00000341040 SNAPC4Q5SXM2 1469 aa25.05■■□□□ 1.6
LCN10-201ENST00000341040 FAM9AQ8IZU1 332 aaPredicted RBP25.03■■□□□ 1.6
LCN10-201ENST00000341040 IGF1RP08069 1367 aa25■■□□□ 1.59
LCN10-201ENST00000341040 ERICH3Q5RHP9 1530 aa25■■□□□ 1.59
LCN10-201ENST00000341040 FBLN2P98095 1184 aa24.98■■□□□ 1.59
LCN10-201ENST00000341040 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
LCN10-201ENST00000341040 ADAMTS12P58397 1594 aa24.92■■□□□ 1.58
LCN10-201ENST00000341040 CHMP7Q8WUX9 453 aaPredicted RBP24.91■■□□□ 1.58
LCN10-201ENST00000341040 CHD1O14646 1710 aa24.9■■□□□ 1.58
LCN10-201ENST00000341040 FHAD1B1AJZ9 1412 aa24.89■■□□□ 1.57
LCN10-201ENST00000341040 CSRNP3Q8WYN3 585 aa24.88■■□□□ 1.57
LCN10-201ENST00000341040 SYNJ2O15056 1496 aa24.88■■□□□ 1.57
LCN10-201ENST00000341040 EEA1Q15075 1411 aa24.87■■□□□ 1.57
LCN10-201ENST00000341040 CARMIL1Q5VZK9 1371 aa24.87■■□□□ 1.57
LCN10-201ENST00000341040 CUL7Q14999 1698 aa24.86■■□□□ 1.57
LCN10-201ENST00000341040 GRIN2AQ12879 1464 aa24.79■■□□□ 1.56
LCN10-201ENST00000341040 EHMT2Q96KQ7 1210 aa24.76■■□□□ 1.55
LCN10-201ENST00000341040 PRXQ9BXM0 1461 aa24.75■■□□□ 1.55
LCN10-201ENST00000341040 OSCARQ8IYS5 282 aa24.75■■□□□ 1.55
LCN10-201ENST00000341040 RAPGEF2Q9Y4G8 1499 aa24.74■■□□□ 1.55
LCN10-201ENST00000341040 CEP170Q5SW79 1584 aa24.68■■□□□ 1.54
LCN10-201ENST00000341040 NUP160Q12769 1436 aa24.63■■□□□ 1.53
LCN10-201ENST00000341040 KIF21BO75037 1637 aa24.62■■□□□ 1.53
LCN10-201ENST00000341040 CLASP1Q7Z460 1538 aa24.57■■□□□ 1.52
LCN10-201ENST00000341040 GOLGA3Q08378 1498 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms