RNA–Protein interactions for RNA: ENST00000340465.2

GFRAL-201, Transcript of GDNF family receptor alpha like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GFRAL, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRAL-201ENST00000340465 NISCHQ9Y2I1 1504 aa18.77■□□□□ 0.59
GFRAL-201ENST00000340465 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
GFRAL-201ENST00000340465 CHIC1Q5VXU3 224 aa17.8■□□□□ 0.44
GFRAL-201ENST00000340465 CCDC180Q9P1Z9 1646 aa16.32■□□□□ 0.2
GFRAL-201ENST00000340465 ZCCHC6Q5VYS8 1495 aaKnown RBP15.84■□□□□ 0.13
GFRAL-201ENST00000340465 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
GFRAL-201ENST00000340465 PHF23Q9BUL5 403 aaPredicted RBP15.69■□□□□ 0.1
GFRAL-201ENST00000340465 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
GFRAL-201ENST00000340465 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
GFRAL-201ENST00000340465 MYO15BQ96JP2 1530 aa15.29■□□□□ 0.04
GFRAL-201ENST00000340465 DCAF8L2P0C7V8 631 aa15.27■□□□□ 0.04
GFRAL-201ENST00000340465 NACADO15069 1562 aa15.09■□□□□ 0.01
GFRAL-201ENST00000340465 ABCC9O60706 1549 aa15.02■□□□□ -0
GFRAL-201ENST00000340465 SUPT5HO00267 1087 aaKnown RBP14.96□□□□□ -0.01
GFRAL-201ENST00000340465 SCRIBQ14160 1630 aa14.96□□□□□ -0.02
GFRAL-201ENST00000340465 RB1CC1Q8TDY2 1594 aa14.88□□□□□ -0.03
GFRAL-201ENST00000340465 FOXD1Q16676 465 aa14.7□□□□□ -0.06
GFRAL-201ENST00000340465 UNC13AQ9UPW8 1703 aa14.65□□□□□ -0.06
GFRAL-201ENST00000340465 RSF1Q96T23 1441 aaPredicted RBP14.64□□□□□ -0.07
GFRAL-201ENST00000340465 CECR2Q9BXF3 1484 aa14.5□□□□□ -0.09
GFRAL-201ENST00000340465 BAZ1AQ9NRL2 1556 aaPredicted RBP14.5□□□□□ -0.09
GFRAL-201ENST00000340465 MROH2BQ7Z745 1585 aa14.48□□□□□ -0.09
GFRAL-201ENST00000340465 WIZO95785 1651 aa14.41□□□□□ -0.1
GFRAL-201ENST00000340465 BICRAQ9NZM4 1560 aa14.4□□□□□ -0.1
GFRAL-201ENST00000340465 SMARCA4P51532 1647 aa14.4□□□□□ -0.11
GFRAL-201ENST00000340465 PLPPR3Q6T4P5 718 aa14.29□□□□□ -0.12
GFRAL-201ENST00000340465 TOP2AP11388 1531 aaKnown RBP14.29□□□□□ -0.12
GFRAL-201ENST00000340465 PEG3Q9GZU2 1588 aa14.23□□□□□ -0.13
GFRAL-201ENST00000340465 EIF4G1Q04637 1599 aaKnown RBP14.18□□□□□ -0.14
GFRAL-201ENST00000340465 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
GFRAL-201ENST00000340465 SMARCA2P51531 1590 aa14.15□□□□□ -0.14
GFRAL-201ENST00000340465 CCDC88BA6NC98 1476 aa14.1□□□□□ -0.15
GFRAL-201ENST00000340465 TRIM41Q8WV44 630 aa14.09□□□□□ -0.15
GFRAL-201ENST00000340465 ATAD2BQ9ULI0 1458 aa14.04□□□□□ -0.16
GFRAL-201ENST00000340465 BAZ1BQ9UIG0 1483 aaKnown RBP13.99□□□□□ -0.17
GFRAL-201ENST00000340465 PPP6R1Q9UPN7 881 aa13.96□□□□□ -0.17
GFRAL-201ENST00000340465 HMGXB3Q12766 1538 aa13.94□□□□□ -0.18
GFRAL-201ENST00000340465 ADRA2BP18089 450 aa13.92□□□□□ -0.18
GFRAL-201ENST00000340465 LOC105371045A0A1W2PR82 267 aa13.92□□□□□ -0.18
GFRAL-201ENST00000340465 ABCC8Q09428 1581 aa13.89□□□□□ -0.19
GFRAL-201ENST00000340465 NCAPD3P42695 1498 aa13.88□□□□□ -0.19
GFRAL-201ENST00000340465 EEA1Q15075 1411 aa13.79□□□□□ -0.2
GFRAL-201ENST00000340465 WRNQ14191 1432 aaPredicted RBP eCLIP13.78□□□□□ -0.2
GFRAL-201ENST00000340465 FAM9AQ8IZU1 332 aaPredicted RBP13.78□□□□□ -0.2
GFRAL-201ENST00000340465 PIAS4Q8N2W9 510 aaPredicted RBP13.76□□□□□ -0.21
GFRAL-201ENST00000340465 PRDM2Q13029 1718 aa13.75□□□□□ -0.21
GFRAL-201ENST00000340465 DNAJC5BQ9UF47 199 aa13.75□□□□□ -0.21
GFRAL-201ENST00000340465 SYNJ1O43426 1573 aa13.73□□□□□ -0.21
GFRAL-201ENST00000340465 BIVM-ERCC5R4GMW8 1640 aa13.7□□□□□ -0.22
GFRAL-201ENST00000340465 TOP2BQ02880 1626 aa13.69□□□□□ -0.22
GFRAL-201ENST00000340465 CC2D2AQ9P2K1 1620 aa13.67□□□□□ -0.22
GFRAL-201ENST00000340465 SOGA1O94964 1423 aa13.67□□□□□ -0.22
GFRAL-201ENST00000340465 CFTRP13569 1480 aa13.65□□□□□ -0.22
GFRAL-201ENST00000340465 PCGF6Q9BYE7 350 aa13.62□□□□□ -0.23
GFRAL-201ENST00000340465 KIF21BO75037 1637 aa13.62□□□□□ -0.23
GFRAL-201ENST00000340465 TRIM26Q12899 539 aaPredicted RBP13.6□□□□□ -0.23
GFRAL-201ENST00000340465 CSRNP3Q8WYN3 585 aa13.6□□□□□ -0.23
GFRAL-201ENST00000340465 GOLGA3Q08378 1498 aa13.59□□□□□ -0.23
GFRAL-201ENST00000340465 RUSC2Q8N2Y8 1516 aa13.58□□□□□ -0.23
GFRAL-201ENST00000340465 TNIKQ9UKE5 1360 aa13.58□□□□□ -0.24
GFRAL-201ENST00000340465 MSH5O43196 834 aa13.58□□□□□ -0.24
GFRAL-201ENST00000340465 CEP164Q9UPV0 1460 aa13.56□□□□□ -0.24
GFRAL-201ENST00000340465 CUX1P39880 1505 aa13.53□□□□□ -0.24
GFRAL-201ENST00000340465 EHMT2Q96KQ7 1210 aa13.53□□□□□ -0.24
GFRAL-201ENST00000340465 CADPSQ9ULU8 1353 aa13.52□□□□□ -0.24
GFRAL-201ENST00000340465 CEP162Q5TB80 1403 aa13.52□□□□□ -0.25
GFRAL-201ENST00000340465 HRCP23327 699 aa13.5□□□□□ -0.25
GFRAL-201ENST00000340465 ERICH3Q5RHP9 1530 aa13.46□□□□□ -0.25
GFRAL-201ENST00000340465 UBTFP17480 764 aaKnown RBP13.44□□□□□ -0.26
GFRAL-201ENST00000340465 KIF27Q86VH2 1401 aa13.42□□□□□ -0.26
GFRAL-201ENST00000340465 LAMC3Q9Y6N6 1575 aa13.41□□□□□ -0.26
GFRAL-201ENST00000340465 PRXQ9BXM0 1461 aa13.4□□□□□ -0.26
GFRAL-201ENST00000340465 RAPGEF2Q9Y4G8 1499 aa13.4□□□□□ -0.26
GFRAL-201ENST00000340465 FANCD2Q9BXW9 1451 aa13.39□□□□□ -0.27
GFRAL-201ENST00000340465 DNMBPQ6XZF7 1577 aa13.36□□□□□ -0.27
GFRAL-201ENST00000340465 CLIP1P30622 1438 aa13.35□□□□□ -0.27
GFRAL-201ENST00000340465 FGD5Q6ZNL6 1462 aa13.34□□□□□ -0.27
GFRAL-201ENST00000340465 VPS8Q8N3P4 1428 aa13.3□□□□□ -0.28
GFRAL-201ENST00000340465 CUX2O14529 1486 aa13.29□□□□□ -0.28
GFRAL-201ENST00000340465 TOPBP1Q92547 1522 aa13.28□□□□□ -0.28
GFRAL-201ENST00000340465 NESP48681 1621 aa13.28□□□□□ -0.28
GFRAL-201ENST00000340465 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
GFRAL-201ENST00000340465 ZEB1P37275 1124 aaPredicted RBP13.25□□□□□ -0.29
GFRAL-201ENST00000340465 PDS5BQ9NTI5 1447 aa13.25□□□□□ -0.29
GFRAL-201ENST00000340465 WDR97A6NE52 1622 aa13.24□□□□□ -0.29
GFRAL-201ENST00000340465 POLA1P09884 1462 aaPredicted RBP13.24□□□□□ -0.29
GFRAL-201ENST00000340465 IGF1RP08069 1367 aa13.22□□□□□ -0.29
GFRAL-201ENST00000340465 CUL7Q14999 1698 aa13.22□□□□□ -0.29
GFRAL-201ENST00000340465 KIF21AQ7Z4S6 1674 aa13.22□□□□□ -0.29
GFRAL-201ENST00000340465 PPARGC1BQ86YN6 1023 aaKnown RBP13.2□□□□□ -0.3
GFRAL-201ENST00000340465 URB2Q14146 1524 aaKnown RBP13.2□□□□□ -0.3
GFRAL-201ENST00000340465 ARAP1Q96P48 1450 aa13.19□□□□□ -0.3
GFRAL-201ENST00000340465 CARMIL1Q5VZK9 1371 aa13.18□□□□□ -0.3
GFRAL-201ENST00000340465 ABCA5Q8WWZ7 1642 aa13.15□□□□□ -0.3
GFRAL-201ENST00000340465 RAD54L2Q9Y4B4 1467 aa13.15□□□□□ -0.3
GFRAL-201ENST00000340465 APLP2Q06481 763 aa13.15□□□□□ -0.3
GFRAL-201ENST00000340465 CTTNBP2Q8WZ74 1663 aa13.13□□□□□ -0.31
GFRAL-201ENST00000340465 ARHGAP35Q9NRY4 1499 aa13.13□□□□□ -0.31
GFRAL-201ENST00000340465 TARBP1Q13395 1621 aaKnown RBP13.09□□□□□ -0.31
GFRAL-201ENST00000340465 EFCAB5A4FU69 1503 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms