RNA–Protein interactions for RNA: ENST00000339530.8

LST1-203, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-203ENST00000339530 NISCHQ9Y2I1 1504 aa25.3■■□□□ 1.64
LST1-203ENST00000339530 CCDC180Q9P1Z9 1646 aa22.27■■□□□ 1.16
LST1-203ENST00000339530 ABCC9O60706 1549 aa21.67■■□□□ 1.06
LST1-203ENST00000339530 ZCCHC6Q5VYS8 1495 aaKnown RBP21.3■■□□□ 1
LST1-203ENST00000339530 DCAF1Q9Y4B6 1507 aa21.06■□□□□ 0.96
LST1-203ENST00000339530 MYO15BQ96JP2 1530 aa20.84■□□□□ 0.93
LST1-203ENST00000339530 NACADO15069 1562 aa20.65■□□□□ 0.9
LST1-203ENST00000339530 RB1CC1Q8TDY2 1594 aa20.63■□□□□ 0.89
LST1-203ENST00000339530 DCAF8L2P0C7V8 631 aa20.56■□□□□ 0.88
LST1-203ENST00000339530 DNAJC5BQ9UF47 199 aa20.49■□□□□ 0.87
LST1-203ENST00000339530 SHROOM4Q9ULL8 1493 aa20.36■□□□□ 0.85
LST1-203ENST00000339530 SCRIBQ14160 1630 aa20.26■□□□□ 0.83
LST1-203ENST00000339530 PABPN1Q86U42 306 aaKnown RBP eCLIP20.14■□□□□ 0.81
LST1-203ENST00000339530 UNC13AQ9UPW8 1703 aa20.08■□□□□ 0.81
LST1-203ENST00000339530 BICRAQ9NZM4 1560 aa19.95■□□□□ 0.78
LST1-203ENST00000339530 CC2D2AQ9P2K1 1620 aa19.6■□□□□ 0.73
LST1-203ENST00000339530 BAZ1AQ9NRL2 1556 aaPredicted RBP19.6■□□□□ 0.73
LST1-203ENST00000339530 CECR2Q9BXF3 1484 aa19.59■□□□□ 0.73
LST1-203ENST00000339530 SUPT5HO00267 1087 aaKnown RBP19.56■□□□□ 0.72
LST1-203ENST00000339530 RSF1Q96T23 1441 aaPredicted RBP19.54■□□□□ 0.72
LST1-203ENST00000339530 EIF4G1Q04637 1599 aaKnown RBP19.52■□□□□ 0.71
LST1-203ENST00000339530 SMARCA4P51532 1647 aa19.5■□□□□ 0.71
LST1-203ENST00000339530 MROH2BQ7Z745 1585 aa19.48■□□□□ 0.71
LST1-203ENST00000339530 WIZO95785 1651 aa19.35■□□□□ 0.69
LST1-203ENST00000339530 PEG3Q9GZU2 1588 aa19.32■□□□□ 0.68
LST1-203ENST00000339530 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
LST1-203ENST00000339530 SMARCA2P51531 1590 aa19.2■□□□□ 0.66
LST1-203ENST00000339530 ATAD2BQ9ULI0 1458 aa19.1■□□□□ 0.65
LST1-203ENST00000339530 DNAJC5Q9H3Z4 198 aa19.07■□□□□ 0.64
LST1-203ENST00000339530 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
LST1-203ENST00000339530 BAZ1BQ9UIG0 1483 aaKnown RBP19.02■□□□□ 0.63
LST1-203ENST00000339530 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
LST1-203ENST00000339530 CCDC88BA6NC98 1476 aa18.91■□□□□ 0.62
LST1-203ENST00000339530 CUX2O14529 1486 aa18.86■□□□□ 0.61
LST1-203ENST00000339530 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
LST1-203ENST00000339530 ERCC6Q03468 1493 aa18.78■□□□□ 0.6
LST1-203ENST00000339530 PRDM2Q13029 1718 aa18.68■□□□□ 0.58
LST1-203ENST00000339530 CFTRP13569 1480 aa18.54■□□□□ 0.56
LST1-203ENST00000339530 NESP48681 1621 aa18.53■□□□□ 0.56
LST1-203ENST00000339530 ABCC8Q09428 1581 aa18.5■□□□□ 0.55
LST1-203ENST00000339530 LAMC3Q9Y6N6 1575 aa18.49■□□□□ 0.55
LST1-203ENST00000339530 TRIM41Q8WV44 630 aa18.48■□□□□ 0.55
LST1-203ENST00000339530 CADPSQ9ULU8 1353 aa18.43■□□□□ 0.54
LST1-203ENST00000339530 WRNQ14191 1432 aaPredicted RBP eCLIP18.43■□□□□ 0.54
LST1-203ENST00000339530 THOC2Q8NI27 1593 aaKnown RBP18.42■□□□□ 0.54
LST1-203ENST00000339530 PDS5BQ9NTI5 1447 aa18.41■□□□□ 0.54
LST1-203ENST00000339530 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
LST1-203ENST00000339530 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
LST1-203ENST00000339530 TOP2BQ02880 1626 aa18.38■□□□□ 0.53
LST1-203ENST00000339530 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
LST1-203ENST00000339530 EEA1Q15075 1411 aa18.28■□□□□ 0.52
LST1-203ENST00000339530 FANCD2Q9BXW9 1451 aa18.25■□□□□ 0.51
LST1-203ENST00000339530 CUX1P39880 1505 aa18.24■□□□□ 0.51
LST1-203ENST00000339530 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
LST1-203ENST00000339530 DNMBPQ6XZF7 1577 aa18.18■□□□□ 0.5
LST1-203ENST00000339530 CEP164Q9UPV0 1460 aa18.18■□□□□ 0.5
LST1-203ENST00000339530 WDR62O43379 1518 aa18.17■□□□□ 0.5
LST1-203ENST00000339530 SOGA1O94964 1423 aa18.09■□□□□ 0.49
LST1-203ENST00000339530 TOPBP1Q92547 1522 aa18.07■□□□□ 0.48
LST1-203ENST00000339530 FGD5Q6ZNL6 1462 aa18.05■□□□□ 0.48
LST1-203ENST00000339530 KIF21BO75037 1637 aa18.05■□□□□ 0.48
LST1-203ENST00000339530 FAM9AQ8IZU1 332 aaPredicted RBP18.01■□□□□ 0.47
LST1-203ENST00000339530 URB2Q14146 1524 aaKnown RBP18.01■□□□□ 0.47
LST1-203ENST00000339530 RUSC2Q8N2Y8 1516 aa18■□□□□ 0.47
LST1-203ENST00000339530 KIF27Q86VH2 1401 aa17.99■□□□□ 0.47
LST1-203ENST00000339530 WDR97A6NE52 1622 aa17.99■□□□□ 0.47
LST1-203ENST00000339530 OSCARQ8IYS5 282 aa17.98■□□□□ 0.47
LST1-203ENST00000339530 CSRNP3Q8WYN3 585 aa17.97■□□□□ 0.47
LST1-203ENST00000339530 POLA1P09884 1462 aaPredicted RBP17.96■□□□□ 0.47
LST1-203ENST00000339530 GOLGA3Q08378 1498 aa17.96■□□□□ 0.47
LST1-203ENST00000339530 LOC105371045A0A1W2PR82 267 aa17.95■□□□□ 0.46
LST1-203ENST00000339530 ABCA10Q8WWZ4 1543 aa17.94■□□□□ 0.46
LST1-203ENST00000339530 ERICH3Q5RHP9 1530 aa17.93■□□□□ 0.46
LST1-203ENST00000339530 TNIKQ9UKE5 1360 aa17.86■□□□□ 0.45
LST1-203ENST00000339530 PRXQ9BXM0 1461 aa17.86■□□□□ 0.45
LST1-203ENST00000339530 TARBP1Q13395 1621 aaKnown RBP17.84■□□□□ 0.45
LST1-203ENST00000339530 ABCA5Q8WWZ7 1642 aa17.84■□□□□ 0.45
LST1-203ENST00000339530 CUL7Q14999 1698 aa17.83■□□□□ 0.45
LST1-203ENST00000339530 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
LST1-203ENST00000339530 RAPGEF2Q9Y4G8 1499 aa17.78■□□□□ 0.44
LST1-203ENST00000339530 IFT140Q96RY7 1462 aa17.76■□□□□ 0.43
LST1-203ENST00000339530 PBRM1Q86U86 1689 aa17.74■□□□□ 0.43
LST1-203ENST00000339530 CEP162Q5TB80 1403 aa17.73■□□□□ 0.43
LST1-203ENST00000339530 IGF1RP08069 1367 aa17.73■□□□□ 0.43
LST1-203ENST00000339530 GAPVD1Q14C86 1478 aa17.71■□□□□ 0.43
LST1-203ENST00000339530 UBTFP17480 764 aaKnown RBP17.69■□□□□ 0.42
LST1-203ENST00000339530 RIMBP3CA6NJZ7 1639 aa17.69■□□□□ 0.42
LST1-203ENST00000339530 RIMBP3BA6NNM3 1639 aa17.69■□□□□ 0.42
LST1-203ENST00000339530 RIMBP3Q9UFD9 1639 aa17.69■□□□□ 0.42
LST1-203ENST00000339530 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
LST1-203ENST00000339530 CARMIL1Q5VZK9 1371 aa17.67■□□□□ 0.42
LST1-203ENST00000339530 EHMT2Q96KQ7 1210 aa17.66■□□□□ 0.42
LST1-203ENST00000339530 CTTNBP2Q8WZ74 1663 aa17.64■□□□□ 0.41
LST1-203ENST00000339530 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
LST1-203ENST00000339530 EIF4G3O43432 1585 aaKnown RBP17.62■□□□□ 0.41
LST1-203ENST00000339530 ADAMTS12P58397 1594 aa17.61■□□□□ 0.41
LST1-203ENST00000339530 TDRD9Q8NDG6 1382 aaKnown RBP17.6■□□□□ 0.41
LST1-203ENST00000339530 CLIP1P30622 1438 aa17.6■□□□□ 0.41
LST1-203ENST00000339530 GRIN2BQ13224 1484 aa17.6■□□□□ 0.41
LST1-203ENST00000339530 FHAD1B1AJZ9 1412 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms