RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 NISCHQ9Y2I1 1504 aa35.74■■■■□ 3.31
SCNN1A-202ENST00000338748 CCDC180Q9P1Z9 1646 aa30.79■■■□□ 2.52
SCNN1A-202ENST00000338748 ZCCHC6Q5VYS8 1495 aaKnown RBP30.13■■■□□ 2.41
SCNN1A-202ENST00000338748 SHROOM4Q9ULL8 1493 aa29.78■■■□□ 2.36
SCNN1A-202ENST00000338748 DCAF8L2P0C7V8 631 aa29.55■■■□□ 2.32
SCNN1A-202ENST00000338748 DCAF1Q9Y4B6 1507 aa29.4■■■□□ 2.3
SCNN1A-202ENST00000338748 ABCC9O60706 1549 aa28.95■■■□□ 2.23
SCNN1A-202ENST00000338748 SUPT5HO00267 1087 aaKnown RBP28.84■■■□□ 2.21
SCNN1A-202ENST00000338748 MYO15BQ96JP2 1530 aa28.82■■■□□ 2.2
SCNN1A-202ENST00000338748 SCRIBQ14160 1630 aa28.64■■■□□ 2.17
SCNN1A-202ENST00000338748 NACADO15069 1562 aa28.58■■■□□ 2.16
SCNN1A-202ENST00000338748 RB1CC1Q8TDY2 1594 aa28.24■■■□□ 2.11
SCNN1A-202ENST00000338748 RSF1Q96T23 1441 aaPredicted RBP27.98■■■□□ 2.07
SCNN1A-202ENST00000338748 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
SCNN1A-202ENST00000338748 UNC13AQ9UPW8 1703 aa27.86■■■□□ 2.05
SCNN1A-202ENST00000338748 CHIC1Q5VXU3 224 aa27.78■■■□□ 2.04
SCNN1A-202ENST00000338748 MROH2BQ7Z745 1585 aa27.73■■■□□ 2.03
SCNN1A-202ENST00000338748 WIZO95785 1651 aa27.55■■■□□ 2
SCNN1A-202ENST00000338748 BICRAQ9NZM4 1560 aa27.54■■■□□ 2
SCNN1A-202ENST00000338748 BAZ1AQ9NRL2 1556 aaPredicted RBP27.5■■□□□ 1.99
SCNN1A-202ENST00000338748 PABPN1Q86U42 306 aaKnown RBP eCLIP27.47■■□□□ 1.99
SCNN1A-202ENST00000338748 SMARCA4P51532 1647 aa27.38■■□□□ 1.97
SCNN1A-202ENST00000338748 TOP2AP11388 1531 aaKnown RBP27.14■■□□□ 1.93
SCNN1A-202ENST00000338748 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
SCNN1A-202ENST00000338748 SMARCA2P51531 1590 aa26.97■■□□□ 1.91
SCNN1A-202ENST00000338748 CCDC88BA6NC98 1476 aa26.96■■□□□ 1.91
SCNN1A-202ENST00000338748 PEG3Q9GZU2 1588 aa26.94■■□□□ 1.9
SCNN1A-202ENST00000338748 TRIM41Q8WV44 630 aa26.94■■□□□ 1.9
SCNN1A-202ENST00000338748 LOC105371045A0A1W2PR82 267 aa26.87■■□□□ 1.89
SCNN1A-202ENST00000338748 ATAD2BQ9ULI0 1458 aa26.82■■□□□ 1.88
SCNN1A-202ENST00000338748 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
SCNN1A-202ENST00000338748 ABCC8Q09428 1581 aa26.65■■□□□ 1.86
SCNN1A-202ENST00000338748 FAM9AQ8IZU1 332 aaPredicted RBP26.65■■□□□ 1.86
SCNN1A-202ENST00000338748 NCAPD3P42695 1498 aa26.43■■□□□ 1.82
SCNN1A-202ENST00000338748 HMGXB3Q12766 1538 aa26.41■■□□□ 1.82
SCNN1A-202ENST00000338748 EHMT2Q96KQ7 1210 aa26.38■■□□□ 1.81
SCNN1A-202ENST00000338748 WRNQ14191 1432 aaPredicted RBP eCLIP26.28■■□□□ 1.8
SCNN1A-202ENST00000338748 SOGA1O94964 1423 aa26.25■■□□□ 1.79
SCNN1A-202ENST00000338748 SYNJ1O43426 1573 aa26.23■■□□□ 1.79
SCNN1A-202ENST00000338748 RUSC2Q8N2Y8 1516 aa26.16■■□□□ 1.78
SCNN1A-202ENST00000338748 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.77
SCNN1A-202ENST00000338748 PCGF6Q9BYE7 350 aa26.12■■□□□ 1.77
SCNN1A-202ENST00000338748 CFTRP13569 1480 aa26.02■■□□□ 1.76
SCNN1A-202ENST00000338748 EEA1Q15075 1411 aa26.01■■□□□ 1.75
SCNN1A-202ENST00000338748 TOP2BQ02880 1626 aa25.98■■□□□ 1.75
SCNN1A-202ENST00000338748 CSRNP3Q8WYN3 585 aa25.96■■□□□ 1.75
SCNN1A-202ENST00000338748 BIVM-ERCC5R4GMW8 1640 aa25.92■■□□□ 1.74
SCNN1A-202ENST00000338748 CUX1P39880 1505 aa25.88■■□□□ 1.73
SCNN1A-202ENST00000338748 PRDM2Q13029 1718 aa25.84■■□□□ 1.73
SCNN1A-202ENST00000338748 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
SCNN1A-202ENST00000338748 TRIM26Q12899 539 aaPredicted RBP25.82■■□□□ 1.72
SCNN1A-202ENST00000338748 TNIKQ9UKE5 1360 aa25.8■■□□□ 1.72
SCNN1A-202ENST00000338748 CEP162Q5TB80 1403 aa25.79■■□□□ 1.72
SCNN1A-202ENST00000338748 GOLGA3Q08378 1498 aa25.79■■□□□ 1.72
SCNN1A-202ENST00000338748 KIF21BO75037 1637 aa25.74■■□□□ 1.71
SCNN1A-202ENST00000338748 UBTFP17480 764 aaKnown RBP25.74■■□□□ 1.71
SCNN1A-202ENST00000338748 CEP164Q9UPV0 1460 aa25.73■■□□□ 1.71
SCNN1A-202ENST00000338748 HRCP23327 699 aa25.68■■□□□ 1.7
SCNN1A-202ENST00000338748 PPARGC1BQ86YN6 1023 aaKnown RBP25.65■■□□□ 1.7
SCNN1A-202ENST00000338748 RAPGEF2Q9Y4G8 1499 aa25.65■■□□□ 1.7
SCNN1A-202ENST00000338748 NESP48681 1621 aa25.62■■□□□ 1.69
SCNN1A-202ENST00000338748 DNAJC5BQ9UF47 199 aa25.61■■□□□ 1.69
SCNN1A-202ENST00000338748 FANCD2Q9BXW9 1451 aa25.58■■□□□ 1.69
SCNN1A-202ENST00000338748 PRXQ9BXM0 1461 aa25.52■■□□□ 1.68
SCNN1A-202ENST00000338748 KIF27Q86VH2 1401 aa25.52■■□□□ 1.68
SCNN1A-202ENST00000338748 FGD5Q6ZNL6 1462 aa25.49■■□□□ 1.67
SCNN1A-202ENST00000338748 ERICH3Q5RHP9 1530 aa25.45■■□□□ 1.67
SCNN1A-202ENST00000338748 CLIP1P30622 1438 aa25.45■■□□□ 1.66
SCNN1A-202ENST00000338748 CUX2O14529 1486 aa25.43■■□□□ 1.66
SCNN1A-202ENST00000338748 LAMC3Q9Y6N6 1575 aa25.42■■□□□ 1.66
SCNN1A-202ENST00000338748 DNMBPQ6XZF7 1577 aa25.39■■□□□ 1.65
SCNN1A-202ENST00000338748 TTBK1Q5TCY1 1321 aaPredicted RBP25.36■■□□□ 1.65
SCNN1A-202ENST00000338748 TOPBP1Q92547 1522 aa25.36■■□□□ 1.65
SCNN1A-202ENST00000338748 RANGAP1P46060 587 aaPredicted RBP25.36■■□□□ 1.65
SCNN1A-202ENST00000338748 IGF1RP08069 1367 aa25.32■■□□□ 1.64
SCNN1A-202ENST00000338748 POLA1P09884 1462 aaPredicted RBP25.31■■□□□ 1.64
SCNN1A-202ENST00000338748 RAD54L2Q9Y4B4 1467 aa25.3■■□□□ 1.64
SCNN1A-202ENST00000338748 URB2Q14146 1524 aaKnown RBP25.28■■□□□ 1.64
SCNN1A-202ENST00000338748 VPS8Q8N3P4 1428 aa25.27■■□□□ 1.64
SCNN1A-202ENST00000338748 KIF21AQ7Z4S6 1674 aa25.22■■□□□ 1.63
SCNN1A-202ENST00000338748 PDS5BQ9NTI5 1447 aa25.22■■□□□ 1.63
SCNN1A-202ENST00000338748 ABCA10Q8WWZ4 1543 aa25.21■■□□□ 1.63
SCNN1A-202ENST00000338748 ARAP1Q96P48 1450 aa25.19■■□□□ 1.62
SCNN1A-202ENST00000338748 CARMIL1Q5VZK9 1371 aa25.17■■□□□ 1.62
SCNN1A-202ENST00000338748 WDR97A6NE52 1622 aa25.11■■□□□ 1.61
SCNN1A-202ENST00000338748 ARHGAP35Q9NRY4 1499 aa25.08■■□□□ 1.61
SCNN1A-202ENST00000338748 TDRD9Q8NDG6 1382 aaKnown RBP25■■□□□ 1.59
SCNN1A-202ENST00000338748 ABCA5Q8WWZ7 1642 aa24.99■■□□□ 1.59
SCNN1A-202ENST00000338748 CUL7Q14999 1698 aa24.96■■□□□ 1.59
SCNN1A-202ENST00000338748 APLP2Q06481 763 aa24.96■■□□□ 1.59
SCNN1A-202ENST00000338748 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
SCNN1A-202ENST00000338748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.93■■□□□ 1.58
SCNN1A-202ENST00000338748 GAPVD1Q14C86 1478 aa24.92■■□□□ 1.58
SCNN1A-202ENST00000338748 MRC2Q9UBG0 1479 aa24.91■■□□□ 1.58
SCNN1A-202ENST00000338748 ZEB1P37275 1124 aaPredicted RBP24.89■■□□□ 1.58
SCNN1A-202ENST00000338748 KANK4Q5T7N3 995 aaPredicted RBP24.87■■□□□ 1.57
SCNN1A-202ENST00000338748 CTTNBP2Q8WZ74 1663 aa24.81■■□□□ 1.56
SCNN1A-202ENST00000338748 CCER1Q8TC90 406 aaPredicted RBP24.78■■□□□ 1.56
SCNN1A-202ENST00000338748 P3H3Q8IVL6 736 aa24.77■■□□□ 1.56
SCNN1A-202ENST00000338748 WDR62O43379 1518 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms