RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 NISCHQ9Y2I1 1504 aa22.06■■□□□ 1.12
ARHGEF3-202ENST00000338458 CCDC180Q9P1Z9 1646 aa18.93■□□□□ 0.62
ARHGEF3-202ENST00000338458 DCAF8L2P0C7V8 631 aa18.75■□□□□ 0.59
ARHGEF3-202ENST00000338458 SHROOM4Q9ULL8 1493 aa18.64■□□□□ 0.58
ARHGEF3-202ENST00000338458 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.56
ARHGEF3-202ENST00000338458 ABCC9O60706 1549 aa18.2■□□□□ 0.5
ARHGEF3-202ENST00000338458 SUPT5HO00267 1087 aaKnown RBP18.05■□□□□ 0.48
ARHGEF3-202ENST00000338458 DCAF1Q9Y4B6 1507 aa18■□□□□ 0.47
ARHGEF3-202ENST00000338458 SCRIBQ14160 1630 aa17.8■□□□□ 0.44
ARHGEF3-202ENST00000338458 NACADO15069 1562 aa17.67■□□□□ 0.42
ARHGEF3-202ENST00000338458 MYO15BQ96JP2 1530 aa17.66■□□□□ 0.42
ARHGEF3-202ENST00000338458 RB1CC1Q8TDY2 1594 aa17.54■□□□□ 0.4
ARHGEF3-202ENST00000338458 PABPN1Q86U42 306 aaKnown RBP eCLIP17.35■□□□□ 0.37
ARHGEF3-202ENST00000338458 CECR2Q9BXF3 1484 aa17.31■□□□□ 0.36
ARHGEF3-202ENST00000338458 RSF1Q96T23 1441 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF3-202ENST00000338458 UNC13AQ9UPW8 1703 aa17.22■□□□□ 0.35
ARHGEF3-202ENST00000338458 CHIC1Q5VXU3 224 aa17.16■□□□□ 0.34
ARHGEF3-202ENST00000338458 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
ARHGEF3-202ENST00000338458 WIZO95785 1651 aa17.05■□□□□ 0.32
ARHGEF3-202ENST00000338458 BICRAQ9NZM4 1560 aa17.04■□□□□ 0.32
ARHGEF3-202ENST00000338458 BAZ1AQ9NRL2 1556 aaPredicted RBP16.99■□□□□ 0.31
ARHGEF3-202ENST00000338458 SMARCA4P51532 1647 aa16.91■□□□□ 0.3
ARHGEF3-202ENST00000338458 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
ARHGEF3-202ENST00000338458 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
ARHGEF3-202ENST00000338458 LOC105371045A0A1W2PR82 267 aa16.72■□□□□ 0.27
ARHGEF3-202ENST00000338458 TOP2AP11388 1531 aaKnown RBP16.72■□□□□ 0.27
ARHGEF3-202ENST00000338458 EHMT2Q96KQ7 1210 aa16.69■□□□□ 0.26
ARHGEF3-202ENST00000338458 CCDC88BA6NC98 1476 aa16.69■□□□□ 0.26
ARHGEF3-202ENST00000338458 ATAD2BQ9ULI0 1458 aa16.63■□□□□ 0.25
ARHGEF3-202ENST00000338458 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
ARHGEF3-202ENST00000338458 BAZ1BQ9UIG0 1483 aaKnown RBP16.59■□□□□ 0.25
ARHGEF3-202ENST00000338458 EIF4G1Q04637 1599 aaKnown RBP16.55■□□□□ 0.24
ARHGEF3-202ENST00000338458 PEG3Q9GZU2 1588 aa16.53■□□□□ 0.24
ARHGEF3-202ENST00000338458 ABCC8Q09428 1581 aa16.52■□□□□ 0.23
ARHGEF3-202ENST00000338458 NCAPD3P42695 1498 aa16.37■□□□□ 0.21
ARHGEF3-202ENST00000338458 CC2D2AQ9P2K1 1620 aa16.3■□□□□ 0.2
ARHGEF3-202ENST00000338458 HMGXB3Q12766 1538 aa16.29■□□□□ 0.2
ARHGEF3-202ENST00000338458 WRNQ14191 1432 aaPredicted RBP eCLIP16.28■□□□□ 0.2
ARHGEF3-202ENST00000338458 SOGA1O94964 1423 aa16.26■□□□□ 0.19
ARHGEF3-202ENST00000338458 RUSC2Q8N2Y8 1516 aa16.21■□□□□ 0.19
ARHGEF3-202ENST00000338458 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
ARHGEF3-202ENST00000338458 PCGF6Q9BYE7 350 aa16.18■□□□□ 0.18
ARHGEF3-202ENST00000338458 DNAJC5BQ9UF47 199 aa16.17■□□□□ 0.18
ARHGEF3-202ENST00000338458 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
ARHGEF3-202ENST00000338458 UBTFP17480 764 aaKnown RBP16.12■□□□□ 0.17
ARHGEF3-202ENST00000338458 CFTRP13569 1480 aa16.1■□□□□ 0.17
ARHGEF3-202ENST00000338458 PPARGC1BQ86YN6 1023 aaKnown RBP16.09■□□□□ 0.17
ARHGEF3-202ENST00000338458 CADPSQ9ULU8 1353 aa16.07■□□□□ 0.16
ARHGEF3-202ENST00000338458 RANGAP1P46060 587 aaPredicted RBP16.06■□□□□ 0.16
ARHGEF3-202ENST00000338458 NESP48681 1621 aa16.03■□□□□ 0.16
ARHGEF3-202ENST00000338458 CUX1P39880 1505 aa16■□□□□ 0.15
ARHGEF3-202ENST00000338458 TOP2BQ02880 1626 aa15.99■□□□□ 0.15
ARHGEF3-202ENST00000338458 TTBK1Q5TCY1 1321 aaPredicted RBP15.99■□□□□ 0.15
ARHGEF3-202ENST00000338458 EEA1Q15075 1411 aa15.98■□□□□ 0.15
ARHGEF3-202ENST00000338458 FANCD2Q9BXW9 1451 aa15.92■□□□□ 0.14
ARHGEF3-202ENST00000338458 BIVM-ERCC5R4GMW8 1640 aa15.92■□□□□ 0.14
ARHGEF3-202ENST00000338458 CEP162Q5TB80 1403 aa15.91■□□□□ 0.14
ARHGEF3-202ENST00000338458 GOLGA3Q08378 1498 aa15.9■□□□□ 0.14
ARHGEF3-202ENST00000338458 TRIM26Q12899 539 aaPredicted RBP15.9■□□□□ 0.14
ARHGEF3-202ENST00000338458 TNIKQ9UKE5 1360 aa15.88■□□□□ 0.13
ARHGEF3-202ENST00000338458 RAPGEF2Q9Y4G8 1499 aa15.87■□□□□ 0.13
ARHGEF3-202ENST00000338458 PRDM2Q13029 1718 aa15.86■□□□□ 0.13
ARHGEF3-202ENST00000338458 CEP164Q9UPV0 1460 aa15.86■□□□□ 0.13
ARHGEF3-202ENST00000338458 FGD5Q6ZNL6 1462 aa15.83■□□□□ 0.12
ARHGEF3-202ENST00000338458 KIF27Q86VH2 1401 aa15.82■□□□□ 0.12
ARHGEF3-202ENST00000338458 CUX2O14529 1486 aa15.82■□□□□ 0.12
ARHGEF3-202ENST00000338458 RAD54L2Q9Y4B4 1467 aa15.78■□□□□ 0.12
ARHGEF3-202ENST00000338458 KIF21BO75037 1637 aa15.77■□□□□ 0.12
ARHGEF3-202ENST00000338458 LAMC3Q9Y6N6 1575 aa15.75■□□□□ 0.11
ARHGEF3-202ENST00000338458 CLIP1P30622 1438 aa15.74■□□□□ 0.11
ARHGEF3-202ENST00000338458 TOPBP1Q92547 1522 aa15.74■□□□□ 0.11
ARHGEF3-202ENST00000338458 PDS5BQ9NTI5 1447 aa15.73■□□□□ 0.11
ARHGEF3-202ENST00000338458 POLA1P09884 1462 aaPredicted RBP15.7■□□□□ 0.1
ARHGEF3-202ENST00000338458 PRXQ9BXM0 1461 aa15.7■□□□□ 0.1
ARHGEF3-202ENST00000338458 URB2Q14146 1524 aaKnown RBP15.7■□□□□ 0.1
ARHGEF3-202ENST00000338458 DNMBPQ6XZF7 1577 aa15.7■□□□□ 0.1
ARHGEF3-202ENST00000338458 IGF1RP08069 1367 aa15.7■□□□□ 0.1
ARHGEF3-202ENST00000338458 HRCP23327 699 aa15.68■□□□□ 0.1
ARHGEF3-202ENST00000338458 KIF21AQ7Z4S6 1674 aa15.68■□□□□ 0.1
ARHGEF3-202ENST00000338458 TDRD9Q8NDG6 1382 aaKnown RBP15.66■□□□□ 0.1
ARHGEF3-202ENST00000338458 CARMIL1Q5VZK9 1371 aa15.65■□□□□ 0.1
ARHGEF3-202ENST00000338458 APLP2Q06481 763 aa15.63■□□□□ 0.09
ARHGEF3-202ENST00000338458 ERICH3Q5RHP9 1530 aa15.61■□□□□ 0.09
ARHGEF3-202ENST00000338458 P3H3Q8IVL6 736 aa15.6■□□□□ 0.09
ARHGEF3-202ENST00000338458 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
ARHGEF3-202ENST00000338458 VPS8Q8N3P4 1428 aa15.56■□□□□ 0.08
ARHGEF3-202ENST00000338458 ERCC6Q03468 1493 aa15.54■□□□□ 0.08
ARHGEF3-202ENST00000338458 ATP1B4Q9UN42 357 aaPredicted RBP15.52■□□□□ 0.08
ARHGEF3-202ENST00000338458 ARAP1Q96P48 1450 aa15.51■□□□□ 0.07
ARHGEF3-202ENST00000338458 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
ARHGEF3-202ENST00000338458 MRC2Q9UBG0 1479 aa15.5■□□□□ 0.07
ARHGEF3-202ENST00000338458 AQRO60306 1485 aaKnown RBP eCLIP15.49■□□□□ 0.07
ARHGEF3-202ENST00000338458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
ARHGEF3-202ENST00000338458 ARHGAP35Q9NRY4 1499 aa15.47■□□□□ 0.07
ARHGEF3-202ENST00000338458 HNRNPUL2Q1KMD3 747 aaKnown RBP15.45■□□□□ 0.06
ARHGEF3-202ENST00000338458 KANK4Q5T7N3 995 aaPredicted RBP15.45■□□□□ 0.06
ARHGEF3-202ENST00000338458 WDR97A6NE52 1622 aa15.42■□□□□ 0.06
ARHGEF3-202ENST00000338458 ZNF608Q9ULD9 1512 aaPredicted RBP15.41■□□□□ 0.06
ARHGEF3-202ENST00000338458 TARBP1Q13395 1621 aaKnown RBP15.41■□□□□ 0.06
ARHGEF3-202ENST00000338458 ABCA5Q8WWZ7 1642 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms