RNA–Protein interactions for RNA: ENST00000338150.8

CAGE1-202, Transcript of cancer antigen 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAGE1, Length 2,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-202ENST00000338150 NISCHQ9Y2I1 1504 aa19.99■□□□□ 0.79
CAGE1-202ENST00000338150 CCDC180Q9P1Z9 1646 aa17.34■□□□□ 0.37
CAGE1-202ENST00000338150 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
CAGE1-202ENST00000338150 ABCC9O60706 1549 aa16.89■□□□□ 0.29
CAGE1-202ENST00000338150 ZCCHC6Q5VYS8 1495 aaKnown RBP16.74■□□□□ 0.27
CAGE1-202ENST00000338150 SHROOM4Q9ULL8 1493 aa16.58■□□□□ 0.24
CAGE1-202ENST00000338150 DCAF1Q9Y4B6 1507 aa16.33■□□□□ 0.21
CAGE1-202ENST00000338150 NACADO15069 1562 aa16.22■□□□□ 0.19
CAGE1-202ENST00000338150 SCRIBQ14160 1630 aa16.22■□□□□ 0.19
CAGE1-202ENST00000338150 RB1CC1Q8TDY2 1594 aa16.17■□□□□ 0.18
CAGE1-202ENST00000338150 MYO15BQ96JP2 1530 aa16.15■□□□□ 0.18
CAGE1-202ENST00000338150 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.15
CAGE1-202ENST00000338150 UNC13AQ9UPW8 1703 aa15.93■□□□□ 0.14
CAGE1-202ENST00000338150 SUPT5HO00267 1087 aaKnown RBP15.84■□□□□ 0.13
CAGE1-202ENST00000338150 BICRAQ9NZM4 1560 aa15.78■□□□□ 0.12
CAGE1-202ENST00000338150 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.11
CAGE1-202ENST00000338150 MROH2BQ7Z745 1585 aa15.54■□□□□ 0.08
CAGE1-202ENST00000338150 RSF1Q96T23 1441 aaPredicted RBP15.52■□□□□ 0.08
CAGE1-202ENST00000338150 WIZO95785 1651 aa15.42■□□□□ 0.06
CAGE1-202ENST00000338150 SMARCA4P51532 1647 aa15.4■□□□□ 0.06
CAGE1-202ENST00000338150 BAZ1AQ9NRL2 1556 aaPredicted RBP15.4■□□□□ 0.06
CAGE1-202ENST00000338150 EIF4G1Q04637 1599 aaKnown RBP15.31■□□□□ 0.04
CAGE1-202ENST00000338150 ATAD2BQ9ULI0 1458 aa15.21■□□□□ 0.03
CAGE1-202ENST00000338150 CC2D2AQ9P2K1 1620 aa15.16■□□□□ 0.02
CAGE1-202ENST00000338150 DNAJC5BQ9UF47 199 aa15.13■□□□□ 0.01
CAGE1-202ENST00000338150 BAZ1BQ9UIG0 1483 aaKnown RBP15.13■□□□□ 0.01
CAGE1-202ENST00000338150 TOP2AP11388 1531 aaKnown RBP15.12■□□□□ 0.01
CAGE1-202ENST00000338150 SMARCA2P51531 1590 aa15.1■□□□□ 0.01
CAGE1-202ENST00000338150 PEG3Q9GZU2 1588 aa15.09■□□□□ 0.01
CAGE1-202ENST00000338150 CCDC88BA6NC98 1476 aa15.06■□□□□ 0
CAGE1-202ENST00000338150 NCAPD3P42695 1498 aa15.03■□□□□ -0
CAGE1-202ENST00000338150 HMGXB3Q12766 1538 aa14.95□□□□□ -0.02
CAGE1-202ENST00000338150 CHIC1Q5VXU3 224 aa14.94□□□□□ -0.02
CAGE1-202ENST00000338150 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
CAGE1-202ENST00000338150 NESP48681 1621 aa14.79□□□□□ -0.04
CAGE1-202ENST00000338150 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
CAGE1-202ENST00000338150 CADPSQ9ULU8 1353 aa14.7□□□□□ -0.06
CAGE1-202ENST00000338150 FAM9AQ8IZU1 332 aaPredicted RBP14.7□□□□□ -0.06
CAGE1-202ENST00000338150 CFTRP13569 1480 aa14.69□□□□□ -0.06
CAGE1-202ENST00000338150 EHMT2Q96KQ7 1210 aa14.67□□□□□ -0.06
CAGE1-202ENST00000338150 WRNQ14191 1432 aaPredicted RBP eCLIP14.6□□□□□ -0.07
CAGE1-202ENST00000338150 SYNJ1O43426 1573 aa14.59□□□□□ -0.07
CAGE1-202ENST00000338150 FANCD2Q9BXW9 1451 aa14.58□□□□□ -0.08
CAGE1-202ENST00000338150 LOC105371045A0A1W2PR82 267 aa14.53□□□□□ -0.08
CAGE1-202ENST00000338150 CUX1P39880 1505 aa14.52□□□□□ -0.08
CAGE1-202ENST00000338150 LAMC3Q9Y6N6 1575 aa14.52□□□□□ -0.09
CAGE1-202ENST00000338150 KIF21AQ7Z4S6 1674 aa14.5□□□□□ -0.09
CAGE1-202ENST00000338150 SOGA1O94964 1423 aa14.49□□□□□ -0.09
CAGE1-202ENST00000338150 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
CAGE1-202ENST00000338150 RUSC2Q8N2Y8 1516 aa14.49□□□□□ -0.09
CAGE1-202ENST00000338150 CEP164Q9UPV0 1460 aa14.47□□□□□ -0.09
CAGE1-202ENST00000338150 PDS5BQ9NTI5 1447 aa14.46□□□□□ -0.09
CAGE1-202ENST00000338150 URB2Q14146 1524 aaKnown RBP14.42□□□□□ -0.1
CAGE1-202ENST00000338150 TOP2BQ02880 1626 aa14.42□□□□□ -0.1
CAGE1-202ENST00000338150 ERCC6Q03468 1493 aa14.42□□□□□ -0.1
CAGE1-202ENST00000338150 FGD5Q6ZNL6 1462 aa14.39□□□□□ -0.11
CAGE1-202ENST00000338150 TOPBP1Q92547 1522 aa14.39□□□□□ -0.11
CAGE1-202ENST00000338150 RAD54L2Q9Y4B4 1467 aa14.38□□□□□ -0.11
CAGE1-202ENST00000338150 BIVM-ERCC5R4GMW8 1640 aa14.38□□□□□ -0.11
CAGE1-202ENST00000338150 DNMBPQ6XZF7 1577 aa14.33□□□□□ -0.11
CAGE1-202ENST00000338150 POLA1P09884 1462 aaPredicted RBP14.33□□□□□ -0.12
CAGE1-202ENST00000338150 MRC2Q9UBG0 1479 aa14.3□□□□□ -0.12
CAGE1-202ENST00000338150 CUX2O14529 1486 aa14.29□□□□□ -0.12
CAGE1-202ENST00000338150 CSRNP3Q8WYN3 585 aa14.28□□□□□ -0.12
CAGE1-202ENST00000338150 TDRD9Q8NDG6 1382 aaKnown RBP14.27□□□□□ -0.12
CAGE1-202ENST00000338150 RANGAP1P46060 587 aaPredicted RBP14.24□□□□□ -0.13
CAGE1-202ENST00000338150 THOC2Q8NI27 1593 aaKnown RBP14.23□□□□□ -0.13
CAGE1-202ENST00000338150 KIF27Q86VH2 1401 aa14.21□□□□□ -0.14
CAGE1-202ENST00000338150 WDR62O43379 1518 aa14.2□□□□□ -0.14
CAGE1-202ENST00000338150 UBTFP17480 764 aaKnown RBP14.2□□□□□ -0.14
CAGE1-202ENST00000338150 AQRO60306 1485 aaKnown RBP eCLIP14.19□□□□□ -0.14
CAGE1-202ENST00000338150 ZNF608Q9ULD9 1512 aaPredicted RBP14.19□□□□□ -0.14
CAGE1-202ENST00000338150 RAPGEF2Q9Y4G8 1499 aa14.16□□□□□ -0.14
CAGE1-202ENST00000338150 ABCA10Q8WWZ4 1543 aa14.16□□□□□ -0.14
CAGE1-202ENST00000338150 TARBP1Q13395 1621 aaKnown RBP14.15□□□□□ -0.14
CAGE1-202ENST00000338150 IGF1RP08069 1367 aa14.15□□□□□ -0.14
CAGE1-202ENST00000338150 EEA1Q15075 1411 aa14.14□□□□□ -0.15
CAGE1-202ENST00000338150 WDR97A6NE52 1622 aa14.11□□□□□ -0.15
CAGE1-202ENST00000338150 GAPVD1Q14C86 1478 aa14.1□□□□□ -0.15
CAGE1-202ENST00000338150 CARMIL1Q5VZK9 1371 aa14.08□□□□□ -0.16
CAGE1-202ENST00000338150 GOLGA3Q08378 1498 aa14.07□□□□□ -0.16
CAGE1-202ENST00000338150 IFT140Q96RY7 1462 aa14.07□□□□□ -0.16
CAGE1-202ENST00000338150 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
CAGE1-202ENST00000338150 ABCA5Q8WWZ7 1642 aa14.06□□□□□ -0.16
CAGE1-202ENST00000338150 FBLN2P98095 1184 aa14.04□□□□□ -0.16
CAGE1-202ENST00000338150 EIF4G3O43432 1585 aaKnown RBP14.03□□□□□ -0.16
CAGE1-202ENST00000338150 KIF21BO75037 1637 aa14.03□□□□□ -0.16
CAGE1-202ENST00000338150 PPARGC1BQ86YN6 1023 aaKnown RBP14□□□□□ -0.17
CAGE1-202ENST00000338150 CEP162Q5TB80 1403 aa14□□□□□ -0.17
CAGE1-202ENST00000338150 PBRM1Q86U86 1689 aa13.99□□□□□ -0.17
CAGE1-202ENST00000338150 SNAPC4Q5SXM2 1469 aa13.99□□□□□ -0.17
CAGE1-202ENST00000338150 TNIKQ9UKE5 1360 aa13.99□□□□□ -0.17
CAGE1-202ENST00000338150 SLC24A1O60721 1099 aa13.98□□□□□ -0.17
CAGE1-202ENST00000338150 GRIN2BQ13224 1484 aa13.97□□□□□ -0.17
CAGE1-202ENST00000338150 P3H3Q8IVL6 736 aa13.96□□□□□ -0.17
CAGE1-202ENST00000338150 TTBK1Q5TCY1 1321 aaPredicted RBP13.96□□□□□ -0.18
CAGE1-202ENST00000338150 ERICH3Q5RHP9 1530 aa13.95□□□□□ -0.18
CAGE1-202ENST00000338150 CHMP7Q8WUX9 453 aaPredicted RBP13.92□□□□□ -0.18
CAGE1-202ENST00000338150 CLIP1P30622 1438 aa13.91□□□□□ -0.18
CAGE1-202ENST00000338150 ADAMTS12P58397 1594 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms