RNA–Protein interactions for RNA: ENST00000338104.10

TTC8-201, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 1 (best) BASIC

Gene TTC8, Length 2,226 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-201ENST00000338104 NISCHQ9Y2I1 1504 aa29.09■■■□□ 2.25
TTC8-201ENST00000338104 CCDC180Q9P1Z9 1646 aa25.58■■□□□ 1.69
TTC8-201ENST00000338104 ABCC9O60706 1549 aa24.67■■□□□ 1.54
TTC8-201ENST00000338104 ZCCHC6Q5VYS8 1495 aaKnown RBP24.33■■□□□ 1.49
TTC8-201ENST00000338104 DCAF8L2P0C7V8 631 aa24.16■■□□□ 1.46
TTC8-201ENST00000338104 DCAF1Q9Y4B6 1507 aa24.02■■□□□ 1.44
TTC8-201ENST00000338104 NACADO15069 1562 aa23.93■■□□□ 1.42
TTC8-201ENST00000338104 MYO15BQ96JP2 1530 aa23.93■■□□□ 1.42
TTC8-201ENST00000338104 RB1CC1Q8TDY2 1594 aa23.84■■□□□ 1.41
TTC8-201ENST00000338104 SCRIBQ14160 1630 aa23.47■■□□□ 1.35
TTC8-201ENST00000338104 UNC13AQ9UPW8 1703 aa23.43■■□□□ 1.34
TTC8-201ENST00000338104 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
TTC8-201ENST00000338104 BICRAQ9NZM4 1560 aa23.21■■□□□ 1.31
TTC8-201ENST00000338104 PABPN1Q86U42 306 aaKnown RBP eCLIP23.17■■□□□ 1.3
TTC8-201ENST00000338104 CECR2Q9BXF3 1484 aa22.68■■□□□ 1.22
TTC8-201ENST00000338104 EIF4G1Q04637 1599 aaKnown RBP22.52■■□□□ 1.2
TTC8-201ENST00000338104 MROH2BQ7Z745 1585 aa22.48■■□□□ 1.19
TTC8-201ENST00000338104 BAZ1AQ9NRL2 1556 aaPredicted RBP22.47■■□□□ 1.19
TTC8-201ENST00000338104 SMARCA4P51532 1647 aa22.47■■□□□ 1.19
TTC8-201ENST00000338104 RSF1Q96T23 1441 aaPredicted RBP22.38■■□□□ 1.17
TTC8-201ENST00000338104 CC2D2AQ9P2K1 1620 aa22.32■■□□□ 1.16
TTC8-201ENST00000338104 DNAJC5BQ9UF47 199 aa22.29■■□□□ 1.16
TTC8-201ENST00000338104 WIZO95785 1651 aa22.26■■□□□ 1.15
TTC8-201ENST00000338104 ATAD2BQ9ULI0 1458 aa22.23■■□□□ 1.15
TTC8-201ENST00000338104 SUPT5HO00267 1087 aaKnown RBP22.22■■□□□ 1.15
TTC8-201ENST00000338104 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
TTC8-201ENST00000338104 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
TTC8-201ENST00000338104 NCAPD3P42695 1498 aa22.11■■□□□ 1.13
TTC8-201ENST00000338104 BAZ1BQ9UIG0 1483 aaKnown RBP22.05■■□□□ 1.12
TTC8-201ENST00000338104 HMGXB3Q12766 1538 aa22.03■■□□□ 1.12
TTC8-201ENST00000338104 TOP2AP11388 1531 aaKnown RBP21.98■■□□□ 1.11
TTC8-201ENST00000338104 CCDC88BA6NC98 1476 aa21.77■■□□□ 1.08
TTC8-201ENST00000338104 NESP48681 1621 aa21.53■■□□□ 1.04
TTC8-201ENST00000338104 CADPSQ9ULU8 1353 aa21.5■■□□□ 1.03
TTC8-201ENST00000338104 CFTRP13569 1480 aa21.48■■□□□ 1.03
TTC8-201ENST00000338104 LAMC3Q9Y6N6 1575 aa21.43■■□□□ 1.02
TTC8-201ENST00000338104 PRDM2Q13029 1718 aa21.33■■□□□ 1.01
TTC8-201ENST00000338104 FANCD2Q9BXW9 1451 aa21.26■□□□□ 0.99
TTC8-201ENST00000338104 PDS5BQ9NTI5 1447 aa21.26■□□□□ 0.99
TTC8-201ENST00000338104 KIF21AQ7Z4S6 1674 aa21.26■□□□□ 0.99
TTC8-201ENST00000338104 ABCC8Q09428 1581 aa21.17■□□□□ 0.98
TTC8-201ENST00000338104 CEP164Q9UPV0 1460 aa21.17■□□□□ 0.98
TTC8-201ENST00000338104 ERCC6Q03468 1493 aa21.16■□□□□ 0.98
TTC8-201ENST00000338104 URB2Q14146 1524 aaKnown RBP21.06■□□□□ 0.96
TTC8-201ENST00000338104 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.96
TTC8-201ENST00000338104 CUX1P39880 1505 aa21.04■□□□□ 0.96
TTC8-201ENST00000338104 THOC2Q8NI27 1593 aaKnown RBP21.03■□□□□ 0.96
TTC8-201ENST00000338104 MRC2Q9UBG0 1479 aa21.03■□□□□ 0.96
TTC8-201ENST00000338104 SYNJ1O43426 1573 aa21.02■□□□□ 0.96
TTC8-201ENST00000338104 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
TTC8-201ENST00000338104 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
TTC8-201ENST00000338104 DNMBPQ6XZF7 1577 aa20.98■□□□□ 0.95
TTC8-201ENST00000338104 WDR62O43379 1518 aa20.96■□□□□ 0.95
TTC8-201ENST00000338104 TOP2BQ02880 1626 aa20.95■□□□□ 0.94
TTC8-201ENST00000338104 BIVM-ERCC5R4GMW8 1640 aa20.94■□□□□ 0.94
TTC8-201ENST00000338104 TRIM41Q8WV44 630 aa20.9■□□□□ 0.94
TTC8-201ENST00000338104 FGD5Q6ZNL6 1462 aa20.87■□□□□ 0.93
TTC8-201ENST00000338104 POLA1P09884 1462 aaPredicted RBP20.86■□□□□ 0.93
TTC8-201ENST00000338104 CUX2O14529 1486 aa20.82■□□□□ 0.92
TTC8-201ENST00000338104 RAD54L2Q9Y4B4 1467 aa20.8■□□□□ 0.92
TTC8-201ENST00000338104 SOGA1O94964 1423 aa20.76■□□□□ 0.91
TTC8-201ENST00000338104 TARBP1Q13395 1621 aaKnown RBP20.74■□□□□ 0.91
TTC8-201ENST00000338104 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
TTC8-201ENST00000338104 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
TTC8-201ENST00000338104 ABCA10Q8WWZ4 1543 aa20.67■□□□□ 0.9
TTC8-201ENST00000338104 ZNF608Q9ULD9 1512 aaPredicted RBP20.65■□□□□ 0.9
TTC8-201ENST00000338104 RUSC2Q8N2Y8 1516 aa20.64■□□□□ 0.89
TTC8-201ENST00000338104 TDRD9Q8NDG6 1382 aaKnown RBP20.63■□□□□ 0.89
TTC8-201ENST00000338104 AQRO60306 1485 aaKnown RBP eCLIP20.59■□□□□ 0.89
TTC8-201ENST00000338104 ABCA5Q8WWZ7 1642 aa20.56■□□□□ 0.88
TTC8-201ENST00000338104 EIF4G3O43432 1585 aaKnown RBP20.55■□□□□ 0.88
TTC8-201ENST00000338104 FAM9AQ8IZU1 332 aaPredicted RBP20.54■□□□□ 0.88
TTC8-201ENST00000338104 KIF27Q86VH2 1401 aa20.54■□□□□ 0.88
TTC8-201ENST00000338104 GAPVD1Q14C86 1478 aa20.52■□□□□ 0.88
TTC8-201ENST00000338104 IGF1RP08069 1367 aa20.46■□□□□ 0.87
TTC8-201ENST00000338104 PBRM1Q86U86 1689 aa20.46■□□□□ 0.87
TTC8-201ENST00000338104 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
TTC8-201ENST00000338104 EEA1Q15075 1411 aa20.43■□□□□ 0.86
TTC8-201ENST00000338104 CSRNP3Q8WYN3 585 aa20.41■□□□□ 0.86
TTC8-201ENST00000338104 ERICH3Q5RHP9 1530 aa20.4■□□□□ 0.86
TTC8-201ENST00000338104 SNAPC4Q5SXM2 1469 aa20.37■□□□□ 0.85
TTC8-201ENST00000338104 CARMIL1Q5VZK9 1371 aa20.32■□□□□ 0.84
TTC8-201ENST00000338104 PRXQ9BXM0 1461 aa20.31■□□□□ 0.84
TTC8-201ENST00000338104 ADAMTS12P58397 1594 aa20.31■□□□□ 0.84
TTC8-201ENST00000338104 MAGI1Q96QZ7 1491 aaPredicted RBP20.31■□□□□ 0.84
TTC8-201ENST00000338104 CUL7Q14999 1698 aa20.3■□□□□ 0.84
TTC8-201ENST00000338104 FHAD1B1AJZ9 1412 aa20.28■□□□□ 0.84
TTC8-201ENST00000338104 EHMT2Q96KQ7 1210 aa20.28■□□□□ 0.84
TTC8-201ENST00000338104 RAPGEF2Q9Y4G8 1499 aa20.25■□□□□ 0.83
TTC8-201ENST00000338104 SYNJ2O15056 1496 aa20.24■□□□□ 0.83
TTC8-201ENST00000338104 KIF21BO75037 1637 aa20.23■□□□□ 0.83
TTC8-201ENST00000338104 FBLN2P98095 1184 aa20.23■□□□□ 0.83
TTC8-201ENST00000338104 LOC105371045A0A1W2PR82 267 aa20.22■□□□□ 0.83
TTC8-201ENST00000338104 CHD1O14646 1710 aa20.21■□□□□ 0.83
TTC8-201ENST00000338104 CHMP7Q8WUX9 453 aaPredicted RBP20.21■□□□□ 0.83
TTC8-201ENST00000338104 GRIN2AQ12879 1464 aa20.19■□□□□ 0.82
TTC8-201ENST00000338104 GOLGA3Q08378 1498 aa20.15■□□□□ 0.82
TTC8-201ENST00000338104 CEP170Q5SW79 1584 aa20.1■□□□□ 0.81
TTC8-201ENST00000338104 UBTFP17480 764 aaKnown RBP20.08■□□□□ 0.81
TTC8-201ENST00000338104 NUP160Q12769 1436 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms