RNA–Protein interactions for RNA: ENST00000335102.9

MARK3-203, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5 BASIC

Gene MARK3, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-203ENST00000335102 NISCHQ9Y2I1 1504 aa20.27■□□□□ 0.84
MARK3-203ENST00000335102 CCDC180Q9P1Z9 1646 aa17.77■□□□□ 0.44
MARK3-203ENST00000335102 ZCCHC6Q5VYS8 1495 aaKnown RBP17.01■□□□□ 0.31
MARK3-203ENST00000335102 ABCC9O60706 1549 aa16.85■□□□□ 0.29
MARK3-203ENST00000335102 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
MARK3-203ENST00000335102 MYO15BQ96JP2 1530 aa16.67■□□□□ 0.26
MARK3-203ENST00000335102 DCAF8L2P0C7V8 631 aa16.67■□□□□ 0.26
MARK3-203ENST00000335102 NACADO15069 1562 aa16.58■□□□□ 0.24
MARK3-203ENST00000335102 RB1CC1Q8TDY2 1594 aa16.45■□□□□ 0.22
MARK3-203ENST00000335102 SHROOM4Q9ULL8 1493 aa16.33■□□□□ 0.2
MARK3-203ENST00000335102 SCRIBQ14160 1630 aa16.26■□□□□ 0.19
MARK3-203ENST00000335102 UNC13AQ9UPW8 1703 aa16.15■□□□□ 0.18
MARK3-203ENST00000335102 BICRAQ9NZM4 1560 aa15.98■□□□□ 0.15
MARK3-203ENST00000335102 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
MARK3-203ENST00000335102 CECR2Q9BXF3 1484 aa15.74■□□□□ 0.11
MARK3-203ENST00000335102 BAZ1AQ9NRL2 1556 aaPredicted RBP15.66■□□□□ 0.1
MARK3-203ENST00000335102 RSF1Q96T23 1441 aaPredicted RBP15.66■□□□□ 0.1
MARK3-203ENST00000335102 MROH2BQ7Z745 1585 aa15.64■□□□□ 0.09
MARK3-203ENST00000335102 SUPT5HO00267 1087 aaKnown RBP15.64■□□□□ 0.09
MARK3-203ENST00000335102 SMARCA4P51532 1647 aa15.61■□□□□ 0.09
MARK3-203ENST00000335102 WIZO95785 1651 aa15.51■□□□□ 0.07
MARK3-203ENST00000335102 EIF4G1Q04637 1599 aaKnown RBP15.49■□□□□ 0.07
MARK3-203ENST00000335102 PEG3Q9GZU2 1588 aa15.47■□□□□ 0.07
MARK3-203ENST00000335102 ATAD2BQ9ULI0 1458 aa15.39■□□□□ 0.05
MARK3-203ENST00000335102 SMARCA2P51531 1590 aa15.38■□□□□ 0.05
MARK3-203ENST00000335102 TOP2AP11388 1531 aaKnown RBP15.35■□□□□ 0.05
MARK3-203ENST00000335102 NCAPD3P42695 1498 aa15.3■□□□□ 0.04
MARK3-203ENST00000335102 CC2D2AQ9P2K1 1620 aa15.29■□□□□ 0.04
MARK3-203ENST00000335102 BAZ1BQ9UIG0 1483 aaKnown RBP15.27■□□□□ 0.03
MARK3-203ENST00000335102 HMGXB3Q12766 1538 aa15.27■□□□□ 0.03
MARK3-203ENST00000335102 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
MARK3-203ENST00000335102 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
MARK3-203ENST00000335102 CHIC1Q5VXU3 224 aa14.95□□□□□ -0.02
MARK3-203ENST00000335102 CFTRP13569 1480 aa14.91□□□□□ -0.02
MARK3-203ENST00000335102 CADPSQ9ULU8 1353 aa14.87□□□□□ -0.03
MARK3-203ENST00000335102 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
MARK3-203ENST00000335102 ABCC8Q09428 1581 aa14.8□□□□□ -0.04
MARK3-203ENST00000335102 LAMC3Q9Y6N6 1575 aa14.8□□□□□ -0.04
MARK3-203ENST00000335102 NESP48681 1621 aa14.77□□□□□ -0.05
MARK3-203ENST00000335102 TRIM41Q8WV44 630 aa14.74□□□□□ -0.05
MARK3-203ENST00000335102 WRNQ14191 1432 aaPredicted RBP eCLIP14.72□□□□□ -0.05
MARK3-203ENST00000335102 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
MARK3-203ENST00000335102 SYNJ1O43426 1573 aa14.69□□□□□ -0.06
MARK3-203ENST00000335102 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
MARK3-203ENST00000335102 TOP2BQ02880 1626 aa14.66□□□□□ -0.06
MARK3-203ENST00000335102 BIVM-ERCC5R4GMW8 1640 aa14.66□□□□□ -0.06
MARK3-203ENST00000335102 CUX1P39880 1505 aa14.64□□□□□ -0.07
MARK3-203ENST00000335102 KIF21AQ7Z4S6 1674 aa14.62□□□□□ -0.07
MARK3-203ENST00000335102 CEP164Q9UPV0 1460 aa14.61□□□□□ -0.07
MARK3-203ENST00000335102 DNMBPQ6XZF7 1577 aa14.56□□□□□ -0.08
MARK3-203ENST00000335102 URB2Q14146 1524 aaKnown RBP14.53□□□□□ -0.08
MARK3-203ENST00000335102 TOPBP1Q92547 1522 aa14.53□□□□□ -0.08
MARK3-203ENST00000335102 SOGA1O94964 1423 aa14.49□□□□□ -0.09
MARK3-203ENST00000335102 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
MARK3-203ENST00000335102 MRC2Q9UBG0 1479 aa14.48□□□□□ -0.09
MARK3-203ENST00000335102 EEA1Q15075 1411 aa14.45□□□□□ -0.1
MARK3-203ENST00000335102 POLA1P09884 1462 aaPredicted RBP14.45□□□□□ -0.1
MARK3-203ENST00000335102 ERCC6Q03468 1493 aa14.45□□□□□ -0.1
MARK3-203ENST00000335102 RUSC2Q8N2Y8 1516 aa14.45□□□□□ -0.1
MARK3-203ENST00000335102 WDR62O43379 1518 aa14.44□□□□□ -0.1
MARK3-203ENST00000335102 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
MARK3-203ENST00000335102 FAM9AQ8IZU1 332 aaPredicted RBP14.42□□□□□ -0.1
MARK3-203ENST00000335102 RAD54L2Q9Y4B4 1467 aa14.38□□□□□ -0.11
MARK3-203ENST00000335102 ABCA10Q8WWZ4 1543 aa14.38□□□□□ -0.11
MARK3-203ENST00000335102 WDR97A6NE52 1622 aa14.37□□□□□ -0.11
MARK3-203ENST00000335102 KIF27Q86VH2 1401 aa14.37□□□□□ -0.11
MARK3-203ENST00000335102 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
MARK3-203ENST00000335102 TARBP1Q13395 1621 aaKnown RBP14.35□□□□□ -0.11
MARK3-203ENST00000335102 CUX2O14529 1486 aa14.35□□□□□ -0.11
MARK3-203ENST00000335102 LOC105371045A0A1W2PR82 267 aa14.34□□□□□ -0.11
MARK3-203ENST00000335102 KIF21BO75037 1637 aa14.29□□□□□ -0.12
MARK3-203ENST00000335102 IFT140Q96RY7 1462 aa14.29□□□□□ -0.12
MARK3-203ENST00000335102 ABCA5Q8WWZ7 1642 aa14.29□□□□□ -0.12
MARK3-203ENST00000335102 IGF1RP08069 1367 aa14.27□□□□□ -0.13
MARK3-203ENST00000335102 PRXQ9BXM0 1461 aa14.26□□□□□ -0.13
MARK3-203ENST00000335102 TDRD9Q8NDG6 1382 aaKnown RBP14.24□□□□□ -0.13
MARK3-203ENST00000335102 GOLGA3Q08378 1498 aa14.23□□□□□ -0.13
MARK3-203ENST00000335102 GAPVD1Q14C86 1478 aa14.23□□□□□ -0.13
MARK3-203ENST00000335102 ERICH3Q5RHP9 1530 aa14.22□□□□□ -0.13
MARK3-203ENST00000335102 RAPGEF2Q9Y4G8 1499 aa14.21□□□□□ -0.14
MARK3-203ENST00000335102 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
MARK3-203ENST00000335102 CUL7Q14999 1698 aa14.18□□□□□ -0.14
MARK3-203ENST00000335102 PBRM1Q86U86 1689 aa14.18□□□□□ -0.14
MARK3-203ENST00000335102 AQRO60306 1485 aaKnown RBP eCLIP14.18□□□□□ -0.145e-8■■■□□ 18.4
MARK3-203ENST00000335102 EHMT2Q96KQ7 1210 aa14.18□□□□□ -0.14
MARK3-203ENST00000335102 CARMIL1Q5VZK9 1371 aa14.18□□□□□ -0.14
MARK3-203ENST00000335102 TNIKQ9UKE5 1360 aa14.17□□□□□ -0.14
MARK3-203ENST00000335102 EIF4G3O43432 1585 aaKnown RBP14.17□□□□□ -0.14
MARK3-203ENST00000335102 GRIN2BQ13224 1484 aa14.15□□□□□ -0.15
MARK3-203ENST00000335102 AEBP2Q6ZN18 517 aaPredicted RBP14.14□□□□□ -0.15
MARK3-203ENST00000335102 UBTFP17480 764 aaKnown RBP14.12□□□□□ -0.15
MARK3-203ENST00000335102 ADAMTS12P58397 1594 aa14.09□□□□□ -0.15
MARK3-203ENST00000335102 FHAD1B1AJZ9 1412 aa14.08□□□□□ -0.16
MARK3-203ENST00000335102 CEP162Q5TB80 1403 aa14.06□□□□□ -0.16
MARK3-203ENST00000335102 SNAPC4Q5SXM2 1469 aa14.06□□□□□ -0.16
MARK3-203ENST00000335102 MAGI1Q96QZ7 1491 aaPredicted RBP14.06□□□□□ -0.16
MARK3-203ENST00000335102 CTTNBP2Q8WZ74 1663 aa14.01□□□□□ -0.17
MARK3-203ENST00000335102 SYNJ2O15056 1496 aa13.99□□□□□ -0.17
MARK3-203ENST00000335102 CLIP1P30622 1438 aa13.98□□□□□ -0.17
MARK3-203ENST00000335102 GRIN2AQ12879 1464 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms