RNA–Protein interactions for RNA: ENST00000332958.2

RFX6-201, Transcript of regulatory factor X6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX6, Length 3,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6-201ENST00000332958 NISCHQ9Y2I1 1504 aa26.22■■□□□ 1.79
RFX6-201ENST00000332958 CCDC180Q9P1Z9 1646 aa23.12■■□□□ 1.29
RFX6-201ENST00000332958 ZCCHC6Q5VYS8 1495 aaKnown RBP22.04■■□□□ 1.12
RFX6-201ENST00000332958 DCAF1Q9Y4B6 1507 aa21.89■■□□□ 1.09
RFX6-201ENST00000332958 MYO15BQ96JP2 1530 aa21.72■■□□□ 1.07
RFX6-201ENST00000332958 ABCC9O60706 1549 aa21.54■■□□□ 1.04
RFX6-201ENST00000332958 NACADO15069 1562 aa21.49■■□□□ 1.03
RFX6-201ENST00000332958 RB1CC1Q8TDY2 1594 aa21.28■■□□□ 1
RFX6-201ENST00000332958 DCAF8L2P0C7V8 631 aa21.24■□□□□ 0.99
RFX6-201ENST00000332958 SCRIBQ14160 1630 aa20.93■□□□□ 0.94
RFX6-201ENST00000332958 SHROOM4Q9ULL8 1493 aa20.89■□□□□ 0.94
RFX6-201ENST00000332958 UNC13AQ9UPW8 1703 aa20.8■□□□□ 0.92
RFX6-201ENST00000332958 BICRAQ9NZM4 1560 aa20.56■□□□□ 0.88
RFX6-201ENST00000332958 BAZ1AQ9NRL2 1556 aaPredicted RBP20.3■□□□□ 0.84
RFX6-201ENST00000332958 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
RFX6-201ENST00000332958 CECR2Q9BXF3 1484 aa20.21■□□□□ 0.83
RFX6-201ENST00000332958 SMARCA4P51532 1647 aa20.19■□□□□ 0.82
RFX6-201ENST00000332958 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.82
RFX6-201ENST00000332958 MROH2BQ7Z745 1585 aa20.15■□□□□ 0.82
RFX6-201ENST00000332958 PEG3Q9GZU2 1588 aa20.08■□□□□ 0.81
RFX6-201ENST00000332958 SUPT5HO00267 1087 aaKnown RBP20.07■□□□□ 0.8
RFX6-201ENST00000332958 WIZO95785 1651 aa19.98■□□□□ 0.79
RFX6-201ENST00000332958 EIF4G1Q04637 1599 aaKnown RBP19.94■□□□□ 0.78
RFX6-201ENST00000332958 SMARCA2P51531 1590 aa19.94■□□□□ 0.78
RFX6-201ENST00000332958 TOP2AP11388 1531 aaKnown RBP19.91■□□□□ 0.78
RFX6-201ENST00000332958 ATAD2BQ9ULI0 1458 aa19.84■□□□□ 0.77
RFX6-201ENST00000332958 HMGXB3Q12766 1538 aa19.8■□□□□ 0.76
RFX6-201ENST00000332958 NCAPD3P42695 1498 aa19.77■□□□□ 0.75
RFX6-201ENST00000332958 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
RFX6-201ENST00000332958 CC2D2AQ9P2K1 1620 aa19.64■□□□□ 0.73
RFX6-201ENST00000332958 CCDC88BA6NC98 1476 aa19.58■□□□□ 0.73
RFX6-201ENST00000332958 PRDM2Q13029 1718 aa19.33■□□□□ 0.69
RFX6-201ENST00000332958 CHIC1Q5VXU3 224 aa19.32■□□□□ 0.68
RFX6-201ENST00000332958 CFTRP13569 1480 aa19.26■□□□□ 0.67
RFX6-201ENST00000332958 CADPSQ9ULU8 1353 aa19.17■□□□□ 0.66
RFX6-201ENST00000332958 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
RFX6-201ENST00000332958 WRNQ14191 1432 aaPredicted RBP eCLIP19.04■□□□□ 0.64
RFX6-201ENST00000332958 ABCC8Q09428 1581 aa19.04■□□□□ 0.64
RFX6-201ENST00000332958 BIVM-ERCC5R4GMW8 1640 aa19.03■□□□□ 0.64
RFX6-201ENST00000332958 TRIM41Q8WV44 630 aa19.03■□□□□ 0.64
RFX6-201ENST00000332958 TOP2BQ02880 1626 aa19.01■□□□□ 0.63
RFX6-201ENST00000332958 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
RFX6-201ENST00000332958 SYNJ1O43426 1573 aa18.96■□□□□ 0.63
RFX6-201ENST00000332958 FANCD2Q9BXW9 1451 aa18.93■□□□□ 0.62
RFX6-201ENST00000332958 PDS5BQ9NTI5 1447 aa18.93■□□□□ 0.62
RFX6-201ENST00000332958 EEA1Q15075 1411 aa18.88■□□□□ 0.61
RFX6-201ENST00000332958 CUX1P39880 1505 aa18.88■□□□□ 0.61
RFX6-201ENST00000332958 NESP48681 1621 aa18.88■□□□□ 0.61
RFX6-201ENST00000332958 CEP164Q9UPV0 1460 aa18.86■□□□□ 0.61
RFX6-201ENST00000332958 DNMBPQ6XZF7 1577 aa18.85■□□□□ 0.61
RFX6-201ENST00000332958 KIF21AQ7Z4S6 1674 aa18.8■□□□□ 0.6
RFX6-201ENST00000332958 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
RFX6-201ENST00000332958 URB2Q14146 1524 aaKnown RBP18.69■□□□□ 0.58
RFX6-201ENST00000332958 MRC2Q9UBG0 1479 aa18.69■□□□□ 0.58
RFX6-201ENST00000332958 FGD5Q6ZNL6 1462 aa18.68■□□□□ 0.58
RFX6-201ENST00000332958 WDR62O43379 1518 aa18.65■□□□□ 0.58
RFX6-201ENST00000332958 SOGA1O94964 1423 aa18.65■□□□□ 0.58
RFX6-201ENST00000332958 WDR97A6NE52 1622 aa18.62■□□□□ 0.57
RFX6-201ENST00000332958 POLA1P09884 1462 aaPredicted RBP18.62■□□□□ 0.57
RFX6-201ENST00000332958 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
RFX6-201ENST00000332958 KIF21BO75037 1637 aa18.61■□□□□ 0.57
RFX6-201ENST00000332958 KIF27Q86VH2 1401 aa18.61■□□□□ 0.57
RFX6-201ENST00000332958 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
RFX6-201ENST00000332958 CSRNP3Q8WYN3 585 aa18.56■□□□□ 0.56
RFX6-201ENST00000332958 ERCC6Q03468 1493 aa18.55■□□□□ 0.56
RFX6-201ENST00000332958 RUSC2Q8N2Y8 1516 aa18.55■□□□□ 0.56
RFX6-201ENST00000332958 TARBP1Q13395 1621 aaKnown RBP18.53■□□□□ 0.56
RFX6-201ENST00000332958 ERICH3Q5RHP9 1530 aa18.53■□□□□ 0.56
RFX6-201ENST00000332958 CUX2O14529 1486 aa18.5■□□□□ 0.55
RFX6-201ENST00000332958 GOLGA3Q08378 1498 aa18.49■□□□□ 0.55
RFX6-201ENST00000332958 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
RFX6-201ENST00000332958 PRXQ9BXM0 1461 aa18.48■□□□□ 0.55
RFX6-201ENST00000332958 IFT140Q96RY7 1462 aa18.47■□□□□ 0.55
RFX6-201ENST00000332958 FAM9AQ8IZU1 332 aaPredicted RBP18.46■□□□□ 0.54
RFX6-201ENST00000332958 CUL7Q14999 1698 aa18.45■□□□□ 0.54
RFX6-201ENST00000332958 RAD54L2Q9Y4B4 1467 aa18.45■□□□□ 0.54
RFX6-201ENST00000332958 TNIKQ9UKE5 1360 aa18.42■□□□□ 0.54
RFX6-201ENST00000332958 LOC105371045A0A1W2PR82 267 aa18.4■□□□□ 0.54
RFX6-201ENST00000332958 IGF1RP08069 1367 aa18.39■□□□□ 0.53
RFX6-201ENST00000332958 GAPVD1Q14C86 1478 aa18.36■□□□□ 0.53
RFX6-201ENST00000332958 PBRM1Q86U86 1689 aa18.35■□□□□ 0.53
RFX6-201ENST00000332958 RAPGEF2Q9Y4G8 1499 aa18.33■□□□□ 0.52
RFX6-201ENST00000332958 CARMIL1Q5VZK9 1371 aa18.3■□□□□ 0.52
RFX6-201ENST00000332958 GRIN2BQ13224 1484 aa18.28■□□□□ 0.52
RFX6-201ENST00000332958 EIF4G3O43432 1585 aaKnown RBP18.26■□□□□ 0.51
RFX6-201ENST00000332958 TDRD9Q8NDG6 1382 aaKnown RBP18.24■□□□□ 0.51
RFX6-201ENST00000332958 ADAMTS12P58397 1594 aa18.23■□□□□ 0.51
RFX6-201ENST00000332958 CEP162Q5TB80 1403 aa18.22■□□□□ 0.51
RFX6-201ENST00000332958 FHAD1B1AJZ9 1412 aa18.21■□□□□ 0.51
RFX6-201ENST00000332958 CTTNBP2Q8WZ74 1663 aa18.2■□□□□ 0.5
RFX6-201ENST00000332958 UBTFP17480 764 aaKnown RBP18.19■□□□□ 0.5
RFX6-201ENST00000332958 MAGI1Q96QZ7 1491 aaPredicted RBP18.19■□□□□ 0.5
RFX6-201ENST00000332958 ZNF608Q9ULD9 1512 aaPredicted RBP18.18■□□□□ 0.5
RFX6-201ENST00000332958 AQRO60306 1485 aaKnown RBP eCLIP18.17■□□□□ 0.5
RFX6-201ENST00000332958 CLIP1P30622 1438 aa18.11■□□□□ 0.49
RFX6-201ENST00000332958 SNAPC4Q5SXM2 1469 aa18.09■□□□□ 0.49
RFX6-201ENST00000332958 EFCAB5A4FU69 1503 aa18.08■□□□□ 0.49
RFX6-201ENST00000332958 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
RFX6-201ENST00000332958 GRIN2AQ12879 1464 aa18.03■□□□□ 0.48
RFX6-201ENST00000332958 EHMT2Q96KQ7 1210 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms