RNA–Protein interactions for RNA: ENST00000330992.8

COPG2-201, Transcript of coatomer protein complex subunit gamma 2, humanhuman

TSL 1 (best) BASIC

Gene COPG2, Length 3,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG2-201ENST00000330992 NISCHQ9Y2I1 1504 aa10.45□□□□□ -0.74
COPG2-201ENST00000330992 ABCC9O60706 1549 aa9.32□□□□□ -0.92
COPG2-201ENST00000330992 AEBP2Q6ZN18 517 aaPredicted RBP9.27□□□□□ -0.93
COPG2-201ENST00000330992 CCDC180Q9P1Z9 1646 aa9.19□□□□□ -0.94
COPG2-201ENST00000330992 DNAJC5BQ9UF47 199 aa9.01□□□□□ -0.97
COPG2-201ENST00000330992 CHIC1Q5VXU3 224 aa8.85□□□□□ -0.99
COPG2-201ENST00000330992 ZCCHC6Q5VYS8 1495 aaKnown RBP8.74□□□□□ -1.01
COPG2-201ENST00000330992 RB1CC1Q8TDY2 1594 aa8.69□□□□□ -1.02
COPG2-201ENST00000330992 PABPN1Q86U42 306 aaKnown RBP eCLIP8.69□□□□□ -1.02
COPG2-201ENST00000330992 UNC13AQ9UPW8 1703 aa8.67□□□□□ -1.02
COPG2-201ENST00000330992 DCAF1Q9Y4B6 1507 aa8.66□□□□□ -1.02
COPG2-201ENST00000330992 MYO15BQ96JP2 1530 aa8.63□□□□□ -1.03
COPG2-201ENST00000330992 BICRAQ9NZM4 1560 aa8.61□□□□□ -1.03
COPG2-201ENST00000330992 NACADO15069 1562 aa8.59□□□□□ -1.03
COPG2-201ENST00000330992 DCAF8L2P0C7V8 631 aa8.57□□□□□ -1.04
COPG2-201ENST00000330992 CC2D2AQ9P2K1 1620 aa8.41□□□□□ -1.06
COPG2-201ENST00000330992 SCRIBQ14160 1630 aa8.38□□□□□ -1.07
COPG2-201ENST00000330992 CECR2Q9BXF3 1484 aa8.36□□□□□ -1.07
COPG2-201ENST00000330992 EIF4G1Q04637 1599 aaKnown RBP8.34□□□□□ -1.07
COPG2-201ENST00000330992 SHROOM4Q9ULL8 1493 aa8.32□□□□□ -1.08
COPG2-201ENST00000330992 DNAJC5Q9H3Z4 198 aa8.2□□□□□ -1.1
COPG2-201ENST00000330992 SENP3Q9H4L4 574 aaPredicted RBP8.12□□□□□ -1.11
COPG2-201ENST00000330992 MROH2BQ7Z745 1585 aa8.06□□□□□ -1.12
COPG2-201ENST00000330992 BAZ1AQ9NRL2 1556 aaPredicted RBP8.06□□□□□ -1.12
COPG2-201ENST00000330992 SMARCA4P51532 1647 aa8.06□□□□□ -1.12
COPG2-201ENST00000330992 RSF1Q96T23 1441 aaPredicted RBP8.04□□□□□ -1.12
COPG2-201ENST00000330992 NESP48681 1621 aa8.03□□□□□ -1.12
COPG2-201ENST00000330992 PEG3Q9GZU2 1588 aa8.01□□□□□ -1.13
COPG2-201ENST00000330992 NCAPD3P42695 1498 aa7.99□□□□□ -1.13
COPG2-201ENST00000330992 WIZO95785 1651 aa7.99□□□□□ -1.13
COPG2-201ENST00000330992 ATAD2BQ9ULI0 1458 aa7.98□□□□□ -1.13
COPG2-201ENST00000330992 CUX2O14529 1486 aa7.97□□□□□ -1.13
COPG2-201ENST00000330992 ERCC6Q03468 1493 aa7.94□□□□□ -1.14
COPG2-201ENST00000330992 SMARCA2P51531 1590 aa7.94□□□□□ -1.14
COPG2-201ENST00000330992 POTEDQ86YR6 584 aa7.94□□□□□ -1.14
COPG2-201ENST00000330992 THOC2Q8NI27 1593 aaKnown RBP7.92□□□□□ -1.14
COPG2-201ENST00000330992 SUPT5HO00267 1087 aaKnown RBP7.91□□□□□ -1.14
COPG2-201ENST00000330992 HMGXB3Q12766 1538 aa7.91□□□□□ -1.14
COPG2-201ENST00000330992 TOP2AP11388 1531 aaKnown RBP7.89□□□□□ -1.15
COPG2-201ENST00000330992 PHF23Q9BUL5 403 aaPredicted RBP7.89□□□□□ -1.15
COPG2-201ENST00000330992 KIF21AQ7Z4S6 1674 aa7.88□□□□□ -1.15
COPG2-201ENST00000330992 BAZ1BQ9UIG0 1483 aaKnown RBP7.88□□□□□ -1.15
COPG2-201ENST00000330992 CCDC88BA6NC98 1476 aa7.82□□□□□ -1.16
COPG2-201ENST00000330992 LAMC3Q9Y6N6 1575 aa7.79□□□□□ -1.16
COPG2-201ENST00000330992 TRIM41Q8WV44 630 aa7.78□□□□□ -1.16
COPG2-201ENST00000330992 WDR62O43379 1518 aa7.73□□□□□ -1.17
COPG2-201ENST00000330992 CADPSQ9ULU8 1353 aa7.73□□□□□ -1.17
COPG2-201ENST00000330992 CFTRP13569 1480 aa7.72□□□□□ -1.17
COPG2-201ENST00000330992 PDS5BQ9NTI5 1447 aa7.71□□□□□ -1.17
COPG2-201ENST00000330992 MRC2Q9UBG0 1479 aa7.71□□□□□ -1.18
COPG2-201ENST00000330992 URB2Q14146 1524 aaKnown RBP7.67□□□□□ -1.18
COPG2-201ENST00000330992 PRDM2Q13029 1718 aa7.67□□□□□ -1.18
COPG2-201ENST00000330992 FANCD2Q9BXW9 1451 aa7.66□□□□□ -1.18
COPG2-201ENST00000330992 CEP164Q9UPV0 1460 aa7.64□□□□□ -1.19
COPG2-201ENST00000330992 ZNF608Q9ULD9 1512 aaPredicted RBP7.63□□□□□ -1.19
COPG2-201ENST00000330992 RIMBP3CA6NJZ7 1639 aa7.61□□□□□ -1.19
COPG2-201ENST00000330992 RIMBP3BA6NNM3 1639 aa7.61□□□□□ -1.19
COPG2-201ENST00000330992 RIMBP3Q9UFD9 1639 aa7.61□□□□□ -1.19
COPG2-201ENST00000330992 OSCARQ8IYS5 282 aa7.58□□□□□ -1.2
COPG2-201ENST00000330992 ABCC8Q09428 1581 aa7.57□□□□□ -1.2
COPG2-201ENST00000330992 ARHGEF11O15085 1522 aa7.55□□□□□ -1.2
COPG2-201ENST00000330992 CUX1P39880 1505 aa7.54□□□□□ -1.2
COPG2-201ENST00000330992 SYNJ1O43426 1573 aa7.54□□□□□ -1.2
COPG2-201ENST00000330992 WRNQ14191 1432 aaPredicted RBP eCLIP7.53□□□□□ -1.2
COPG2-201ENST00000330992 BIVM-ERCC5R4GMW8 1640 aa7.53□□□□□ -1.2
COPG2-201ENST00000330992 TOP2BQ02880 1626 aa7.53□□□□□ -1.2
COPG2-201ENST00000330992 EIF4G3O43432 1585 aaKnown RBP7.52□□□□□ -1.21
COPG2-201ENST00000330992 TOPBP1Q92547 1522 aa7.52□□□□□ -1.21
COPG2-201ENST00000330992 DNMBPQ6XZF7 1577 aa7.52□□□□□ -1.21
COPG2-201ENST00000330992 AQRO60306 1485 aaKnown RBP eCLIP7.51□□□□□ -1.21
COPG2-201ENST00000330992 CHD1O14646 1710 aa7.5□□□□□ -1.21
COPG2-201ENST00000330992 TARBP1Q13395 1621 aaKnown RBP7.5□□□□□ -1.21
COPG2-201ENST00000330992 ARAP1Q96P48 1450 aa7.5□□□□□ -1.21
COPG2-201ENST00000330992 CYB5RLQ6IPT4 315 aa7.49□□□□□ -1.21
COPG2-201ENST00000330992 IFT140Q96RY7 1462 aa7.48□□□□□ -1.21
COPG2-201ENST00000330992 FOXD1Q16676 465 aa7.47□□□□□ -1.21
COPG2-201ENST00000330992 POLA1P09884 1462 aaPredicted RBP7.47□□□□□ -1.21
COPG2-201ENST00000330992 FGD5Q6ZNL6 1462 aa7.47□□□□□ -1.21
COPG2-201ENST00000330992 RAD54L2Q9Y4B4 1467 aa7.47□□□□□ -1.21
COPG2-201ENST00000330992 WDR97A6NE52 1622 aa7.43□□□□□ -1.22
COPG2-201ENST00000330992 SOGA1O94964 1423 aa7.43□□□□□ -1.22
COPG2-201ENST00000330992 TDRD9Q8NDG6 1382 aaKnown RBP7.42□□□□□ -1.22
COPG2-201ENST00000330992 ABCA10Q8WWZ4 1543 aa7.42□□□□□ -1.22
COPG2-201ENST00000330992 RUSC2Q8N2Y8 1516 aa7.4□□□□□ -1.22
COPG2-201ENST00000330992 FBLN2P98095 1184 aa7.4□□□□□ -1.22
COPG2-201ENST00000330992 CLASP1Q7Z460 1538 aa7.4□□□□□ -1.22
COPG2-201ENST00000330992 SNAPC4Q5SXM2 1469 aa7.39□□□□□ -1.23
COPG2-201ENST00000330992 TRHP20396 242 aaPredicted RBP7.38□□□□□ -1.23
COPG2-201ENST00000330992 ERCC6L2Q5T890 1561 aa7.38□□□□□ -1.23
COPG2-201ENST00000330992 ABCA5Q8WWZ7 1642 aa7.38□□□□□ -1.23
COPG2-201ENST00000330992 IGF1RP08069 1367 aa7.35□□□□□ -1.23
COPG2-201ENST00000330992 KIF27Q86VH2 1401 aa7.35□□□□□ -1.23
COPG2-201ENST00000330992 GAPVD1Q14C86 1478 aa7.34□□□□□ -1.23
COPG2-201ENST00000330992 EEA1Q15075 1411 aa7.33□□□□□ -1.24
COPG2-201ENST00000330992 PBRM1Q86U86 1689 aa7.33□□□□□ -1.24
COPG2-201ENST00000330992 ERICH3Q5RHP9 1530 aa7.32□□□□□ -1.24
COPG2-201ENST00000330992 CSRNP3Q8WYN3 585 aa7.31□□□□□ -1.24
COPG2-201ENST00000330992 GRIN2BQ13224 1484 aa7.31□□□□□ -1.24
COPG2-201ENST00000330992 PRXQ9BXM0 1461 aa7.3□□□□□ -1.24
COPG2-201ENST00000330992 FAM9AQ8IZU1 332 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms