RNA–Protein interactions for RNA: ENST00000330881.6

PRAMEF7-201, Transcript of PRAME family member 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF7, Length 1,560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF7-201ENST00000330881 NISCHQ9Y2I1 1504 aa28.28■■■□□ 2.12
PRAMEF7-201ENST00000330881 CCDC180Q9P1Z9 1646 aa25.17■■□□□ 1.62
PRAMEF7-201ENST00000330881 ABCC9O60706 1549 aa25.09■■□□□ 1.61
PRAMEF7-201ENST00000330881 DCAF8L2P0C7V8 631 aa23.96■■□□□ 1.43
PRAMEF7-201ENST00000330881 RB1CC1Q8TDY2 1594 aa23.93■■□□□ 1.42
PRAMEF7-201ENST00000330881 NACADO15069 1562 aa23.83■■□□□ 1.4
PRAMEF7-201ENST00000330881 MYO15BQ96JP2 1530 aa23.57■■□□□ 1.36
PRAMEF7-201ENST00000330881 PABPN1Q86U42 306 aaKnown RBP eCLIP23.47■■□□□ 1.35
PRAMEF7-201ENST00000330881 ZCCHC6Q5VYS8 1495 aaKnown RBP23.46■■□□□ 1.35
PRAMEF7-201ENST00000330881 DNAJC5BQ9UF47 199 aa23.37■■□□□ 1.33
PRAMEF7-201ENST00000330881 DCAF1Q9Y4B6 1507 aa23.35■■□□□ 1.33
PRAMEF7-201ENST00000330881 UNC13AQ9UPW8 1703 aa23.26■■□□□ 1.31
PRAMEF7-201ENST00000330881 BICRAQ9NZM4 1560 aa23.19■■□□□ 1.3
PRAMEF7-201ENST00000330881 SCRIBQ14160 1630 aa23.02■■□□□ 1.28
PRAMEF7-201ENST00000330881 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
PRAMEF7-201ENST00000330881 EIF4G1Q04637 1599 aaKnown RBP22.64■■□□□ 1.21
PRAMEF7-201ENST00000330881 CC2D2AQ9P2K1 1620 aa22.61■■□□□ 1.21
PRAMEF7-201ENST00000330881 CECR2Q9BXF3 1484 aa22.58■■□□□ 1.21
PRAMEF7-201ENST00000330881 NCAPD3P42695 1498 aa22.04■■□□□ 1.12
PRAMEF7-201ENST00000330881 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
PRAMEF7-201ENST00000330881 SMARCA4P51532 1647 aa21.96■■□□□ 1.11
PRAMEF7-201ENST00000330881 BAZ1AQ9NRL2 1556 aaPredicted RBP21.93■■□□□ 1.1
PRAMEF7-201ENST00000330881 SMARCA2P51531 1590 aa21.93■■□□□ 1.1
PRAMEF7-201ENST00000330881 HMGXB3Q12766 1538 aa21.83■■□□□ 1.09
PRAMEF7-201ENST00000330881 BAZ1BQ9UIG0 1483 aaKnown RBP21.8■■□□□ 1.08
PRAMEF7-201ENST00000330881 MROH2BQ7Z745 1585 aa21.79■■□□□ 1.08
PRAMEF7-201ENST00000330881 PEG3Q9GZU2 1588 aa21.75■■□□□ 1.07
PRAMEF7-201ENST00000330881 ERCC6Q03468 1493 aa21.66■■□□□ 1.06
PRAMEF7-201ENST00000330881 NESP48681 1621 aa21.6■■□□□ 1.05
PRAMEF7-201ENST00000330881 CUX2O14529 1486 aa21.5■■□□□ 1.03
PRAMEF7-201ENST00000330881 WIZO95785 1651 aa21.5■■□□□ 1.03
PRAMEF7-201ENST00000330881 RSF1Q96T23 1441 aaPredicted RBP21.47■■□□□ 1.03
PRAMEF7-201ENST00000330881 LAMC3Q9Y6N6 1575 aa21.46■■□□□ 1.03
PRAMEF7-201ENST00000330881 CADPSQ9ULU8 1353 aa21.42■■□□□ 1.02
PRAMEF7-201ENST00000330881 PDS5BQ9NTI5 1447 aa21.41■■□□□ 1.02
PRAMEF7-201ENST00000330881 DNAJC5Q9H3Z4 198 aa21.31■■□□□ 1
PRAMEF7-201ENST00000330881 TOP2AP11388 1531 aaKnown RBP21.27■□□□□ 0.99
PRAMEF7-201ENST00000330881 THOC2Q8NI27 1593 aaKnown RBP21.25■□□□□ 0.99
PRAMEF7-201ENST00000330881 KIF21AQ7Z4S6 1674 aa21.23■□□□□ 0.99
PRAMEF7-201ENST00000330881 CFTRP13569 1480 aa21.17■□□□□ 0.98
PRAMEF7-201ENST00000330881 MRC2Q9UBG0 1479 aa21.15■□□□□ 0.98
PRAMEF7-201ENST00000330881 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
PRAMEF7-201ENST00000330881 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
PRAMEF7-201ENST00000330881 CCDC88BA6NC98 1476 aa21.08■□□□□ 0.96
PRAMEF7-201ENST00000330881 WDR62O43379 1518 aa21.06■□□□□ 0.96
PRAMEF7-201ENST00000330881 URB2Q14146 1524 aaKnown RBP20.91■□□□□ 0.94
PRAMEF7-201ENST00000330881 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
PRAMEF7-201ENST00000330881 SUPT5HO00267 1087 aaKnown RBP20.8■□□□□ 0.92
PRAMEF7-201ENST00000330881 ABCC8Q09428 1581 aa20.75■□□□□ 0.91
PRAMEF7-201ENST00000330881 TOPBP1Q92547 1522 aa20.74■□□□□ 0.91
PRAMEF7-201ENST00000330881 IFT140Q96RY7 1462 aa20.71■□□□□ 0.91
PRAMEF7-201ENST00000330881 OSCARQ8IYS5 282 aa20.68■□□□□ 0.9
PRAMEF7-201ENST00000330881 DNMBPQ6XZF7 1577 aa20.66■□□□□ 0.9
PRAMEF7-201ENST00000330881 ZNF608Q9ULD9 1512 aaPredicted RBP20.64■□□□□ 0.89
PRAMEF7-201ENST00000330881 POLA1P09884 1462 aaPredicted RBP20.54■□□□□ 0.88
PRAMEF7-201ENST00000330881 AQRO60306 1485 aaKnown RBP eCLIP20.52■□□□□ 0.88
PRAMEF7-201ENST00000330881 TRIM41Q8WV44 630 aa20.52■□□□□ 0.88
PRAMEF7-201ENST00000330881 SOGA1O94964 1423 aa20.51■□□□□ 0.87
PRAMEF7-201ENST00000330881 RAD54L2Q9Y4B4 1467 aa20.49■□□□□ 0.87
PRAMEF7-201ENST00000330881 TARBP1Q13395 1621 aaKnown RBP20.48■□□□□ 0.87
PRAMEF7-201ENST00000330881 EIF4G3O43432 1585 aaKnown RBP20.47■□□□□ 0.87
PRAMEF7-201ENST00000330881 TDRD9Q8NDG6 1382 aaKnown RBP20.46■□□□□ 0.87
PRAMEF7-201ENST00000330881 FGD5Q6ZNL6 1462 aa20.45■□□□□ 0.86
PRAMEF7-201ENST00000330881 CUX1P39880 1505 aa20.45■□□□□ 0.86
PRAMEF7-201ENST00000330881 FBLN2P98095 1184 aa20.43■□□□□ 0.86
PRAMEF7-201ENST00000330881 CHMP7Q8WUX9 453 aaPredicted RBP20.31■□□□□ 0.84
PRAMEF7-201ENST00000330881 WDR97A6NE52 1622 aa20.29■□□□□ 0.84
PRAMEF7-201ENST00000330881 GRIN2BQ13224 1484 aa20.28■□□□□ 0.84
PRAMEF7-201ENST00000330881 SNAPC4Q5SXM2 1469 aa20.28■□□□□ 0.84
PRAMEF7-201ENST00000330881 WRNQ14191 1432 aaPredicted RBP eCLIP20.26■□□□□ 0.83
PRAMEF7-201ENST00000330881 GAPVD1Q14C86 1478 aa20.24■□□□□ 0.83
PRAMEF7-201ENST00000330881 CHD1O14646 1710 aa20.24■□□□□ 0.83
PRAMEF7-201ENST00000330881 ABCA10Q8WWZ4 1543 aa20.23■□□□□ 0.83
PRAMEF7-201ENST00000330881 MAGI1Q96QZ7 1491 aaPredicted RBP20.23■□□□□ 0.83
PRAMEF7-201ENST00000330881 ARHGEF11O15085 1522 aa20.22■□□□□ 0.83
PRAMEF7-201ENST00000330881 RIMBP3CA6NJZ7 1639 aa20.22■□□□□ 0.83
PRAMEF7-201ENST00000330881 RIMBP3BA6NNM3 1639 aa20.22■□□□□ 0.83
PRAMEF7-201ENST00000330881 RIMBP3Q9UFD9 1639 aa20.22■□□□□ 0.83
PRAMEF7-201ENST00000330881 CYB5RLQ6IPT4 315 aa20.19■□□□□ 0.82
PRAMEF7-201ENST00000330881 SYNJ2O15056 1496 aa20.17■□□□□ 0.82
PRAMEF7-201ENST00000330881 TOP2BQ02880 1626 aa20.17■□□□□ 0.82
PRAMEF7-201ENST00000330881 SYNJ1O43426 1573 aa20.14■□□□□ 0.82
PRAMEF7-201ENST00000330881 BIVM-ERCC5R4GMW8 1640 aa20.12■□□□□ 0.81
PRAMEF7-201ENST00000330881 ABCA5Q8WWZ7 1642 aa20.11■□□□□ 0.81
PRAMEF7-201ENST00000330881 PBRM1Q86U86 1689 aa20.09■□□□□ 0.81
PRAMEF7-201ENST00000330881 CLASP1Q7Z460 1538 aa20.05■□□□□ 0.8
PRAMEF7-201ENST00000330881 ARAP1Q96P48 1450 aa20.04■□□□□ 0.8
PRAMEF7-201ENST00000330881 FHAD1B1AJZ9 1412 aa20■□□□□ 0.79
PRAMEF7-201ENST00000330881 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
PRAMEF7-201ENST00000330881 ERICH3Q5RHP9 1530 aa19.97■□□□□ 0.79
PRAMEF7-201ENST00000330881 ADAMTS12P58397 1594 aa19.95■□□□□ 0.78
PRAMEF7-201ENST00000330881 NUP160Q12769 1436 aa19.92■□□□□ 0.78
PRAMEF7-201ENST00000330881 TRHP20396 242 aaPredicted RBP19.91■□□□□ 0.78
PRAMEF7-201ENST00000330881 KIF27Q86VH2 1401 aa19.88■□□□□ 0.77
PRAMEF7-201ENST00000330881 CEP170Q5SW79 1584 aa19.87■□□□□ 0.77
PRAMEF7-201ENST00000330881 IGF1RP08069 1367 aa19.85■□□□□ 0.77
PRAMEF7-201ENST00000330881 JPH4Q96JJ6 628 aa19.83■□□□□ 0.76
PRAMEF7-201ENST00000330881 ERCC6L2Q5T890 1561 aa19.77■□□□□ 0.76
PRAMEF7-201ENST00000330881 PRG4Q92954 1404 aaPredicted RBP19.76■□□□□ 0.75
PRAMEF7-201ENST00000330881 CARMIL1Q5VZK9 1371 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms