RNA–Protein interactions for RNA: ENST00000329493.5

C19orf71-201, Transcript of chromosome 19 open reading frame 71, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf71, Length 674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf71-201ENST00000329493 NISCHQ9Y2I1 1504 aa27.21■■□□□ 1.95
C19orf71-201ENST00000329493 CCDC180Q9P1Z9 1646 aa23.81■■□□□ 1.4
C19orf71-201ENST00000329493 ABCC9O60706 1549 aa23.64■■□□□ 1.37
C19orf71-201ENST00000329493 ZCCHC6Q5VYS8 1495 aaKnown RBP22.85■■□□□ 1.25
C19orf71-201ENST00000329493 DCAF1Q9Y4B6 1507 aa22.57■■□□□ 1.2
C19orf71-201ENST00000329493 DCAF8L2P0C7V8 631 aa22.43■■□□□ 1.18
C19orf71-201ENST00000329493 RB1CC1Q8TDY2 1594 aa22.41■■□□□ 1.18
C19orf71-201ENST00000329493 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
C19orf71-201ENST00000329493 NACADO15069 1562 aa22.3■■□□□ 1.16
C19orf71-201ENST00000329493 DNAJC5BQ9UF47 199 aa22.14■■□□□ 1.13
C19orf71-201ENST00000329493 PABPN1Q86U42 306 aaKnown RBP eCLIP22.11■■□□□ 1.13
C19orf71-201ENST00000329493 SHROOM4Q9ULL8 1493 aa22.05■■□□□ 1.12
C19orf71-201ENST00000329493 UNC13AQ9UPW8 1703 aa21.87■■□□□ 1.09
C19orf71-201ENST00000329493 BICRAQ9NZM4 1560 aa21.85■■□□□ 1.09
C19orf71-201ENST00000329493 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
C19orf71-201ENST00000329493 CC2D2AQ9P2K1 1620 aa21.27■■□□□ 1
C19orf71-201ENST00000329493 EIF4G1Q04637 1599 aaKnown RBP21.26■□□□□ 0.99
C19orf71-201ENST00000329493 CECR2Q9BXF3 1484 aa21.23■□□□□ 0.99
C19orf71-201ENST00000329493 SUPT5HO00267 1087 aaKnown RBP21.22■□□□□ 0.99
C19orf71-201ENST00000329493 RSF1Q96T23 1441 aaPredicted RBP21.06■□□□□ 0.96
C19orf71-201ENST00000329493 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
C19orf71-201ENST00000329493 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
C19orf71-201ENST00000329493 SMARCA4P51532 1647 aa20.93■□□□□ 0.94
C19orf71-201ENST00000329493 WIZO95785 1651 aa20.78■□□□□ 0.92
C19orf71-201ENST00000329493 PEG3Q9GZU2 1588 aa20.71■□□□□ 0.91
C19orf71-201ENST00000329493 SMARCA2P51531 1590 aa20.65■□□□□ 0.9
C19orf71-201ENST00000329493 TOP2AP11388 1531 aaKnown RBP20.65■□□□□ 0.9
C19orf71-201ENST00000329493 NCAPD3P42695 1498 aa20.65■□□□□ 0.9
C19orf71-201ENST00000329493 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.89
C19orf71-201ENST00000329493 BAZ1BQ9UIG0 1483 aaKnown RBP20.51■□□□□ 0.87
C19orf71-201ENST00000329493 HMGXB3Q12766 1538 aa20.46■□□□□ 0.87
C19orf71-201ENST00000329493 CCDC88BA6NC98 1476 aa20.39■□□□□ 0.85
C19orf71-201ENST00000329493 NESP48681 1621 aa20.37■□□□□ 0.85
C19orf71-201ENST00000329493 ERCC6Q03468 1493 aa20.33■□□□□ 0.85
C19orf71-201ENST00000329493 CHIC1Q5VXU3 224 aa20.29■□□□□ 0.84
C19orf71-201ENST00000329493 CUX2O14529 1486 aa20.18■□□□□ 0.82
C19orf71-201ENST00000329493 DNAJC5Q9H3Z4 198 aa20.09■□□□□ 0.81
C19orf71-201ENST00000329493 LAMC3Q9Y6N6 1575 aa20.08■□□□□ 0.81
C19orf71-201ENST00000329493 CADPSQ9ULU8 1353 aa20.06■□□□□ 0.8
C19orf71-201ENST00000329493 TRIM41Q8WV44 630 aa20.02■□□□□ 0.8
C19orf71-201ENST00000329493 PDS5BQ9NTI5 1447 aa20.02■□□□□ 0.79
C19orf71-201ENST00000329493 THOC2Q8NI27 1593 aaKnown RBP20.01■□□□□ 0.79
C19orf71-201ENST00000329493 CFTRP13569 1480 aa19.99■□□□□ 0.79
C19orf71-201ENST00000329493 KIF21AQ7Z4S6 1674 aa19.97■□□□□ 0.79
C19orf71-201ENST00000329493 ABCC8Q09428 1581 aa19.89■□□□□ 0.77
C19orf71-201ENST00000329493 WRNQ14191 1432 aaPredicted RBP eCLIP19.86■□□□□ 0.77
C19orf71-201ENST00000329493 PRDM2Q13029 1718 aa19.86■□□□□ 0.77
C19orf71-201ENST00000329493 MRC2Q9UBG0 1479 aa19.86■□□□□ 0.77
C19orf71-201ENST00000329493 FANCD2Q9BXW9 1451 aa19.83■□□□□ 0.76
C19orf71-201ENST00000329493 CEP164Q9UPV0 1460 aa19.8■□□□□ 0.76
C19orf71-201ENST00000329493 WDR62O43379 1518 aa19.77■□□□□ 0.76
C19orf71-201ENST00000329493 SYNJ1O43426 1573 aa19.73■□□□□ 0.75
C19orf71-201ENST00000329493 TOP2BQ02880 1626 aa19.7■□□□□ 0.74
C19orf71-201ENST00000329493 URB2Q14146 1524 aaKnown RBP19.69■□□□□ 0.74
C19orf71-201ENST00000329493 BIVM-ERCC5R4GMW8 1640 aa19.68■□□□□ 0.74
C19orf71-201ENST00000329493 CUX1P39880 1505 aa19.63■□□□□ 0.73
C19orf71-201ENST00000329493 EEA1Q15075 1411 aa19.63■□□□□ 0.73
C19orf71-201ENST00000329493 FAM9AQ8IZU1 332 aaPredicted RBP19.56■□□□□ 0.72
C19orf71-201ENST00000329493 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
C19orf71-201ENST00000329493 SOGA1O94964 1423 aa19.52■□□□□ 0.72
C19orf71-201ENST00000329493 TOPBP1Q92547 1522 aa19.47■□□□□ 0.71
C19orf71-201ENST00000329493 FGD5Q6ZNL6 1462 aa19.45■□□□□ 0.7
C19orf71-201ENST00000329493 ZNF608Q9ULD9 1512 aaPredicted RBP19.45■□□□□ 0.7
C19orf71-201ENST00000329493 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
C19orf71-201ENST00000329493 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
C19orf71-201ENST00000329493 RUSC2Q8N2Y8 1516 aa19.41■□□□□ 0.7
C19orf71-201ENST00000329493 KIF27Q86VH2 1401 aa19.4■□□□□ 0.7
C19orf71-201ENST00000329493 IFT140Q96RY7 1462 aa19.4■□□□□ 0.7
C19orf71-201ENST00000329493 POLA1P09884 1462 aaPredicted RBP19.36■□□□□ 0.69
C19orf71-201ENST00000329493 OSCARQ8IYS5 282 aa19.36■□□□□ 0.69
C19orf71-201ENST00000329493 KIF21BO75037 1637 aa19.31■□□□□ 0.68
C19orf71-201ENST00000329493 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
C19orf71-201ENST00000329493 GOLGA3Q08378 1498 aa19.3■□□□□ 0.68
C19orf71-201ENST00000329493 AQRO60306 1485 aaKnown RBP eCLIP19.29■□□□□ 0.68
C19orf71-201ENST00000329493 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
C19orf71-201ENST00000329493 TARBP1Q13395 1621 aaKnown RBP19.25■□□□□ 0.67
C19orf71-201ENST00000329493 EIF4G3O43432 1585 aaKnown RBP19.24■□□□□ 0.67
C19orf71-201ENST00000329493 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
C19orf71-201ENST00000329493 TDRD9Q8NDG6 1382 aaKnown RBP19.22■□□□□ 0.67
C19orf71-201ENST00000329493 PRXQ9BXM0 1461 aa19.22■□□□□ 0.67
C19orf71-201ENST00000329493 TNIKQ9UKE5 1360 aa19.21■□□□□ 0.67
C19orf71-201ENST00000329493 ERICH3Q5RHP9 1530 aa19.21■□□□□ 0.67
C19orf71-201ENST00000329493 WDR97A6NE52 1622 aa19.21■□□□□ 0.67
C19orf71-201ENST00000329493 UBTFP17480 764 aaKnown RBP19.18■□□□□ 0.66
C19orf71-201ENST00000329493 IGF1RP08069 1367 aa19.18■□□□□ 0.66
C19orf71-201ENST00000329493 RAPGEF2Q9Y4G8 1499 aa19.15■□□□□ 0.66
C19orf71-201ENST00000329493 FBLN2P98095 1184 aa19.14■□□□□ 0.65
C19orf71-201ENST00000329493 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.65
C19orf71-201ENST00000329493 GAPVD1Q14C86 1478 aa19.1■□□□□ 0.65
C19orf71-201ENST00000329493 CARMIL1Q5VZK9 1371 aa19.1■□□□□ 0.65
C19orf71-201ENST00000329493 CUL7Q14999 1698 aa19.1■□□□□ 0.65
C19orf71-201ENST00000329493 CEP162Q5TB80 1403 aa19.08■□□□□ 0.65
C19orf71-201ENST00000329493 SNAPC4Q5SXM2 1469 aa19.06■□□□□ 0.64
C19orf71-201ENST00000329493 RIMBP3CA6NJZ7 1639 aa19.05■□□□□ 0.64
C19orf71-201ENST00000329493 RIMBP3BA6NNM3 1639 aa19.05■□□□□ 0.64
C19orf71-201ENST00000329493 RIMBP3Q9UFD9 1639 aa19.05■□□□□ 0.64
C19orf71-201ENST00000329493 ARHGEF11O15085 1522 aa19.04■□□□□ 0.64
C19orf71-201ENST00000329493 CHD1O14646 1710 aa19.03■□□□□ 0.64
C19orf71-201ENST00000329493 GRIN2BQ13224 1484 aa19■□□□□ 0.63
C19orf71-201ENST00000329493 CHMP7Q8WUX9 453 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms