RNA–Protein interactions for RNA: ENST00000324954.10

SMARCA2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 1,781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-202ENST00000324954 NISCHQ9Y2I1 1504 aa20.63■□□□□ 0.89
SMARCA2-202ENST00000324954 CHIC1Q5VXU3 224 aa18.61■□□□□ 0.57
SMARCA2-202ENST00000324954 AEBP2Q6ZN18 517 aaPredicted RBP18.55■□□□□ 0.56
SMARCA2-202ENST00000324954 CCDC180Q9P1Z9 1646 aa18.18■□□□□ 0.5
SMARCA2-202ENST00000324954 ABCC9O60706 1549 aa17.6■□□□□ 0.41
SMARCA2-202ENST00000324954 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
SMARCA2-202ENST00000324954 DCAF8L2P0C7V8 631 aa17.15■□□□□ 0.34
SMARCA2-202ENST00000324954 DCAF1Q9Y4B6 1507 aa17.03■□□□□ 0.32
SMARCA2-202ENST00000324954 NACADO15069 1562 aa17.03■□□□□ 0.32
SMARCA2-202ENST00000324954 MYO15BQ96JP2 1530 aa17■□□□□ 0.31
SMARCA2-202ENST00000324954 RB1CC1Q8TDY2 1594 aa16.99■□□□□ 0.31
SMARCA2-202ENST00000324954 UNC13AQ9UPW8 1703 aa16.69■□□□□ 0.26
SMARCA2-202ENST00000324954 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
SMARCA2-202ENST00000324954 BICRAQ9NZM4 1560 aa16.53■□□□□ 0.24
SMARCA2-202ENST00000324954 SHROOM4Q9ULL8 1493 aa16.52■□□□□ 0.24
SMARCA2-202ENST00000324954 PABPN1Q86U42 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
SMARCA2-202ENST00000324954 PHF23Q9BUL5 403 aaPredicted RBP16.51■□□□□ 0.23
SMARCA2-202ENST00000324954 CECR2Q9BXF3 1484 aa16.09■□□□□ 0.17
SMARCA2-202ENST00000324954 EIF4G1Q04637 1599 aaKnown RBP16.05■□□□□ 0.16
SMARCA2-202ENST00000324954 DNAJC5BQ9UF47 199 aa15.98■□□□□ 0.15
SMARCA2-202ENST00000324954 SMARCA4P51532 1647 aa15.95■□□□□ 0.14
SMARCA2-202ENST00000324954 SENP3Q9H4L4 574 aaPredicted RBP15.95■□□□□ 0.14
SMARCA2-202ENST00000324954 BAZ1AQ9NRL2 1556 aaPredicted RBP15.94■□□□□ 0.14
SMARCA2-202ENST00000324954 MROH2BQ7Z745 1585 aa15.93■□□□□ 0.14
SMARCA2-202ENST00000324954 CC2D2AQ9P2K1 1620 aa15.93■□□□□ 0.14
SMARCA2-202ENST00000324954 RSF1Q96T23 1441 aaPredicted RBP15.84■□□□□ 0.13
SMARCA2-202ENST00000324954 ATAD2BQ9ULI0 1458 aa15.8■□□□□ 0.12
SMARCA2-202ENST00000324954 WIZO95785 1651 aa15.79■□□□□ 0.12
SMARCA2-202ENST00000324954 PEG3Q9GZU2 1588 aa15.78■□□□□ 0.12
SMARCA2-202ENST00000324954 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
SMARCA2-202ENST00000324954 NCAPD3P42695 1498 aa15.73■□□□□ 0.11
SMARCA2-202ENST00000324954 BAZ1BQ9UIG0 1483 aaKnown RBP15.67■□□□□ 0.1
SMARCA2-202ENST00000324954 HMGXB3Q12766 1538 aa15.66■□□□□ 0.1
SMARCA2-202ENST00000324954 SUPT5HO00267 1087 aaKnown RBP15.66■□□□□ 0.1
SMARCA2-202ENST00000324954 PLPPR3Q6T4P5 718 aa15.63■□□□□ 0.09
SMARCA2-202ENST00000324954 TOP2AP11388 1531 aaKnown RBP15.58■□□□□ 0.08
SMARCA2-202ENST00000324954 CCDC88BA6NC98 1476 aa15.42■□□□□ 0.06
SMARCA2-202ENST00000324954 EHMT2Q96KQ7 1210 aa15.34■□□□□ 0.05
SMARCA2-202ENST00000324954 NESP48681 1621 aa15.34■□□□□ 0.05
SMARCA2-202ENST00000324954 CADPSQ9ULU8 1353 aa15.29■□□□□ 0.04
SMARCA2-202ENST00000324954 CFTRP13569 1480 aa15.26■□□□□ 0.03
SMARCA2-202ENST00000324954 LAMC3Q9Y6N6 1575 aa15.26■□□□□ 0.03
SMARCA2-202ENST00000324954 PRDM2Q13029 1718 aa15.16■□□□□ 0.02
SMARCA2-202ENST00000324954 KIF21AQ7Z4S6 1674 aa15.15■□□□□ 0.02
SMARCA2-202ENST00000324954 PDS5BQ9NTI5 1447 aa15.14■□□□□ 0.01
SMARCA2-202ENST00000324954 FANCD2Q9BXW9 1451 aa15.13■□□□□ 0.01
SMARCA2-202ENST00000324954 ERCC6Q03468 1493 aa15.11■□□□□ 0.01
SMARCA2-202ENST00000324954 CEP164Q9UPV0 1460 aa15.06■□□□□ 0
SMARCA2-202ENST00000324954 THOC2Q8NI27 1593 aaKnown RBP15.01□□□□□ -0.01
SMARCA2-202ENST00000324954 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
SMARCA2-202ENST00000324954 URB2Q14146 1524 aaKnown RBP14.98□□□□□ -0.01
SMARCA2-202ENST00000324954 MRC2Q9UBG0 1479 aa14.98□□□□□ -0.01
SMARCA2-202ENST00000324954 WDR62O43379 1518 aa14.94□□□□□ -0.02
SMARCA2-202ENST00000324954 CUX1P39880 1505 aa14.92□□□□□ -0.02
SMARCA2-202ENST00000324954 TOPBP1Q92547 1522 aa14.92□□□□□ -0.02
SMARCA2-202ENST00000324954 KCNA4P22459 653 aa14.91□□□□□ -0.02
SMARCA2-202ENST00000324954 DNMBPQ6XZF7 1577 aa14.9□□□□□ -0.02
SMARCA2-202ENST00000324954 WRNQ14191 1432 aaPredicted RBP eCLIP14.9□□□□□ -0.02
SMARCA2-202ENST00000324954 SYNJ1O43426 1573 aa14.89□□□□□ -0.03
SMARCA2-202ENST00000324954 TOP2BQ02880 1626 aa14.85□□□□□ -0.03
SMARCA2-202ENST00000324954 BIVM-ERCC5R4GMW8 1640 aa14.83□□□□□ -0.03
SMARCA2-202ENST00000324954 CUX2O14529 1486 aa14.82□□□□□ -0.04
SMARCA2-202ENST00000324954 POLA1P09884 1462 aaPredicted RBP14.82□□□□□ -0.04
SMARCA2-202ENST00000324954 FGD5Q6ZNL6 1462 aa14.82□□□□□ -0.04
SMARCA2-202ENST00000324954 RAD54L2Q9Y4B4 1467 aa14.77□□□□□ -0.04
SMARCA2-202ENST00000324954 FOXD1Q16676 465 aa14.76□□□□□ -0.05
SMARCA2-202ENST00000324954 TARBP1Q13395 1621 aaKnown RBP14.75□□□□□ -0.05
SMARCA2-202ENST00000324954 SOGA1O94964 1423 aa14.74□□□□□ -0.05
SMARCA2-202ENST00000324954 TRIM41Q8WV44 630 aa14.73□□□□□ -0.05
SMARCA2-202ENST00000324954 IFT140Q96RY7 1462 aa14.72□□□□□ -0.05
SMARCA2-202ENST00000324954 ZNF608Q9ULD9 1512 aaPredicted RBP14.71□□□□□ -0.05
SMARCA2-202ENST00000324954 WDR97A6NE52 1622 aa14.68□□□□□ -0.06
SMARCA2-202ENST00000324954 ABCA10Q8WWZ4 1543 aa14.67□□□□□ -0.06
SMARCA2-202ENST00000324954 TDRD9Q8NDG6 1382 aaKnown RBP14.66□□□□□ -0.06
SMARCA2-202ENST00000324954 AQRO60306 1485 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMARCA2-202ENST00000324954 EIF4G3O43432 1585 aaKnown RBP14.64□□□□□ -0.07
SMARCA2-202ENST00000324954 ADRA2BP18089 450 aa14.6□□□□□ -0.07
SMARCA2-202ENST00000324954 CSRNP3Q8WYN3 585 aa14.6□□□□□ -0.07
SMARCA2-202ENST00000324954 ABCA5Q8WWZ7 1642 aa14.6□□□□□ -0.07
SMARCA2-202ENST00000324954 RUSC2Q8N2Y8 1516 aa14.59□□□□□ -0.07
SMARCA2-202ENST00000324954 GAPVD1Q14C86 1478 aa14.58□□□□□ -0.08
SMARCA2-202ENST00000324954 SLC24A1O60721 1099 aa14.56□□□□□ -0.08
SMARCA2-202ENST00000324954 KIF27Q86VH2 1401 aa14.54□□□□□ -0.08
SMARCA2-202ENST00000324954 PBRM1Q86U86 1689 aa14.54□□□□□ -0.08
SMARCA2-202ENST00000324954 GRIN2BQ13224 1484 aa14.52□□□□□ -0.08
SMARCA2-202ENST00000324954 IGF1RP08069 1367 aa14.49□□□□□ -0.09
SMARCA2-202ENST00000324954 SNAPC4Q5SXM2 1469 aa14.49□□□□□ -0.09
SMARCA2-202ENST00000324954 ERICH3Q5RHP9 1530 aa14.49□□□□□ -0.09
SMARCA2-202ENST00000324954 FAM9AQ8IZU1 332 aaPredicted RBP14.47□□□□□ -0.09
SMARCA2-202ENST00000324954 MAGI1Q96QZ7 1491 aaPredicted RBP14.45□□□□□ -0.1
SMARCA2-202ENST00000324954 ADAMTS12P58397 1594 aa14.43□□□□□ -0.1
SMARCA2-202ENST00000324954 SLC4A1APQ9BWU0 796 aaKnown RBP14.42□□□□□ -0.1
SMARCA2-202ENST00000324954 CHD1O14646 1710 aa14.41□□□□□ -0.1
SMARCA2-202ENST00000324954 EEA1Q15075 1411 aa14.4□□□□□ -0.1
SMARCA2-202ENST00000324954 FBLN2P98095 1184 aa14.4□□□□□ -0.1
SMARCA2-202ENST00000324954 SYNJ2O15056 1496 aa14.4□□□□□ -0.1
SMARCA2-202ENST00000324954 CUL7Q14999 1698 aa14.4□□□□□ -0.1
SMARCA2-202ENST00000324954 FHAD1B1AJZ9 1412 aa14.4□□□□□ -0.1
SMARCA2-202ENST00000324954 CARMIL1Q5VZK9 1371 aa14.39□□□□□ -0.11
SMARCA2-202ENST00000324954 CHMP7Q8WUX9 453 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms