RNA–Protein interactions for RNA: ENST00000318121.7

CLSPN-202, Transcript of claspin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSPN, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPN-202ENST00000318121 NISCHQ9Y2I1 1504 aa13.27□□□□□ -0.29
CLSPN-202ENST00000318121 CCDC180Q9P1Z9 1646 aa11.67□□□□□ -0.54
CLSPN-202ENST00000318121 ABCC9O60706 1549 aa11.2□□□□□ -0.62
CLSPN-202ENST00000318121 DCAF8L2P0C7V8 631 aa11.15□□□□□ -0.63
CLSPN-202ENST00000318121 ZCCHC6Q5VYS8 1495 aaKnown RBP11.09□□□□□ -0.63
CLSPN-202ENST00000318121 DCAF1Q9Y4B6 1507 aa11□□□□□ -0.65
CLSPN-202ENST00000318121 NACADO15069 1562 aa10.95□□□□□ -0.66
CLSPN-202ENST00000318121 MYO15BQ96JP2 1530 aa10.95□□□□□ -0.66
CLSPN-202ENST00000318121 RB1CC1Q8TDY2 1594 aa10.91□□□□□ -0.66
CLSPN-202ENST00000318121 SHROOM4Q9ULL8 1493 aa10.7□□□□□ -0.7
CLSPN-202ENST00000318121 SCRIBQ14160 1630 aa10.67□□□□□ -0.7
CLSPN-202ENST00000318121 PABPN1Q86U42 306 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLSPN-202ENST00000318121 UNC13AQ9UPW8 1703 aa10.51□□□□□ -0.73
CLSPN-202ENST00000318121 BICRAQ9NZM4 1560 aa10.45□□□□□ -0.74
CLSPN-202ENST00000318121 BAZ1AQ9NRL2 1556 aaPredicted RBP10.3□□□□□ -0.76
CLSPN-202ENST00000318121 CECR2Q9BXF3 1484 aa10.27□□□□□ -0.76
CLSPN-202ENST00000318121 SUPT5HO00267 1087 aaKnown RBP10.27□□□□□ -0.77
CLSPN-202ENST00000318121 SMARCA4P51532 1647 aa10.22□□□□□ -0.77
CLSPN-202ENST00000318121 EIF4G1Q04637 1599 aaKnown RBP10.22□□□□□ -0.77
CLSPN-202ENST00000318121 RSF1Q96T23 1441 aaPredicted RBP10.21□□□□□ -0.77
CLSPN-202ENST00000318121 MROH2BQ7Z745 1585 aa10.2□□□□□ -0.78
CLSPN-202ENST00000318121 SMARCA2P51531 1590 aa10.17□□□□□ -0.78
CLSPN-202ENST00000318121 ATAD2BQ9ULI0 1458 aa10.13□□□□□ -0.79
CLSPN-202ENST00000318121 BAZ1BQ9UIG0 1483 aaKnown RBP10.1□□□□□ -0.79
CLSPN-202ENST00000318121 PEG3Q9GZU2 1588 aa10.1□□□□□ -0.79
CLSPN-202ENST00000318121 CC2D2AQ9P2K1 1620 aa10.1□□□□□ -0.79
CLSPN-202ENST00000318121 NCAPD3P42695 1498 aa10.1□□□□□ -0.79
CLSPN-202ENST00000318121 WIZO95785 1651 aa10.09□□□□□ -0.79
CLSPN-202ENST00000318121 HMGXB3Q12766 1538 aa10.05□□□□□ -0.8
CLSPN-202ENST00000318121 TOP2AP11388 1531 aaKnown RBP10.05□□□□□ -0.8
CLSPN-202ENST00000318121 DNAJC5BQ9UF47 199 aa9.97□□□□□ -0.81
CLSPN-202ENST00000318121 CCDC88BA6NC98 1476 aa9.92□□□□□ -0.82
CLSPN-202ENST00000318121 CADPSQ9ULU8 1353 aa9.85□□□□□ -0.83
CLSPN-202ENST00000318121 CFTRP13569 1480 aa9.8□□□□□ -0.84
CLSPN-202ENST00000318121 PDS5BQ9NTI5 1447 aa9.79□□□□□ -0.84
CLSPN-202ENST00000318121 LAMC3Q9Y6N6 1575 aa9.79□□□□□ -0.84
CLSPN-202ENST00000318121 TRIM41Q8WV44 630 aa9.72□□□□□ -0.85
CLSPN-202ENST00000318121 NESP48681 1621 aa9.72□□□□□ -0.85
CLSPN-202ENST00000318121 FANCD2Q9BXW9 1451 aa9.71□□□□□ -0.85
CLSPN-202ENST00000318121 ERCC6Q03468 1493 aa9.7□□□□□ -0.86
CLSPN-202ENST00000318121 CHIC1Q5VXU3 224 aa9.7□□□□□ -0.86
CLSPN-202ENST00000318121 CEP164Q9UPV0 1460 aa9.7□□□□□ -0.86
CLSPN-202ENST00000318121 PRDM2Q13029 1718 aa9.69□□□□□ -0.86
CLSPN-202ENST00000318121 WRNQ14191 1432 aaPredicted RBP eCLIP9.68□□□□□ -0.86
CLSPN-202ENST00000318121 ABCC8Q09428 1581 aa9.67□□□□□ -0.86
CLSPN-202ENST00000318121 MRC2Q9UBG0 1479 aa9.61□□□□□ -0.87
CLSPN-202ENST00000318121 DNMBPQ6XZF7 1577 aa9.58□□□□□ -0.88
CLSPN-202ENST00000318121 KIF21AQ7Z4S6 1674 aa9.58□□□□□ -0.88
CLSPN-202ENST00000318121 TOPBP1Q92547 1522 aa9.57□□□□□ -0.88
CLSPN-202ENST00000318121 TOP2BQ02880 1626 aa9.56□□□□□ -0.88
CLSPN-202ENST00000318121 CUX1P39880 1505 aa9.56□□□□□ -0.88
CLSPN-202ENST00000318121 URB2Q14146 1524 aaKnown RBP9.54□□□□□ -0.88
CLSPN-202ENST00000318121 SYNJ1O43426 1573 aa9.54□□□□□ -0.88
CLSPN-202ENST00000318121 BIVM-ERCC5R4GMW8 1640 aa9.54□□□□□ -0.88
CLSPN-202ENST00000318121 FGD5Q6ZNL6 1462 aa9.53□□□□□ -0.88
CLSPN-202ENST00000318121 SOGA1O94964 1423 aa9.53□□□□□ -0.88
CLSPN-202ENST00000318121 WDR62O43379 1518 aa9.52□□□□□ -0.89
CLSPN-202ENST00000318121 EEA1Q15075 1411 aa9.51□□□□□ -0.89
CLSPN-202ENST00000318121 POLA1P09884 1462 aaPredicted RBP9.5□□□□□ -0.89
CLSPN-202ENST00000318121 KIF27Q86VH2 1401 aa9.49□□□□□ -0.89
CLSPN-202ENST00000318121 FAM9AQ8IZU1 332 aaPredicted RBP9.49□□□□□ -0.89
CLSPN-202ENST00000318121 IFT140Q96RY7 1462 aa9.48□□□□□ -0.89
CLSPN-202ENST00000318121 THOC2Q8NI27 1593 aaKnown RBP9.48□□□□□ -0.89
CLSPN-202ENST00000318121 CUX2O14529 1486 aa9.47□□□□□ -0.89
CLSPN-202ENST00000318121 CSRNP3Q8WYN3 585 aa9.46□□□□□ -0.9
CLSPN-202ENST00000318121 RAD54L2Q9Y4B4 1467 aa9.45□□□□□ -0.9
CLSPN-202ENST00000318121 ABCA10Q8WWZ4 1543 aa9.45□□□□□ -0.9
CLSPN-202ENST00000318121 TDRD9Q8NDG6 1382 aaKnown RBP9.42□□□□□ -0.9
CLSPN-202ENST00000318121 GAPVD1Q14C86 1478 aa9.41□□□□□ -0.9
CLSPN-202ENST00000318121 WDR97A6NE52 1622 aa9.4□□□□□ -0.9
CLSPN-202ENST00000318121 TARBP1Q13395 1621 aaKnown RBP9.38□□□□□ -0.91
CLSPN-202ENST00000318121 GRIN2BQ13224 1484 aa9.37□□□□□ -0.91
CLSPN-202ENST00000318121 AQRO60306 1485 aaKnown RBP eCLIP9.36□□□□□ -0.916e-7■■■■■ 49.8
CLSPN-202ENST00000318121 UBTFP17480 764 aaKnown RBP9.36□□□□□ -0.91
CLSPN-202ENST00000318121 CARMIL1Q5VZK9 1371 aa9.36□□□□□ -0.91
CLSPN-202ENST00000318121 IGF1RP08069 1367 aa9.36□□□□□ -0.91
CLSPN-202ENST00000318121 RUSC2Q8N2Y8 1516 aa9.36□□□□□ -0.91
CLSPN-202ENST00000318121 ERICH3Q5RHP9 1530 aa9.35□□□□□ -0.91
CLSPN-202ENST00000318121 ZNF608Q9ULD9 1512 aaPredicted RBP9.34□□□□□ -0.91
CLSPN-202ENST00000318121 CHMP7Q8WUX9 453 aaPredicted RBP9.33□□□□□ -0.92
CLSPN-202ENST00000318121 ABCA5Q8WWZ7 1642 aa9.33□□□□□ -0.92
CLSPN-202ENST00000318121 GOLGA3Q08378 1498 aa9.32□□□□□ -0.92
CLSPN-202ENST00000318121 EHMT2Q96KQ7 1210 aa9.32□□□□□ -0.92
CLSPN-202ENST00000318121 FHAD1B1AJZ9 1412 aa9.32□□□□□ -0.92
CLSPN-202ENST00000318121 FBLN2P98095 1184 aa9.32□□□□□ -0.92
CLSPN-202ENST00000318121 RAPGEF2Q9Y4G8 1499 aa9.32□□□□□ -0.92
CLSPN-202ENST00000318121 CUL7Q14999 1698 aa9.31□□□□□ -0.92
CLSPN-202ENST00000318121 MAGI1Q96QZ7 1491 aaPredicted RBP9.31□□□□□ -0.92
CLSPN-202ENST00000318121 EIF4G3O43432 1585 aaKnown RBP9.31□□□□□ -0.92
CLSPN-202ENST00000318121 PRXQ9BXM0 1461 aa9.29□□□□□ -0.92
CLSPN-202ENST00000318121 KIF21BO75037 1637 aa9.29□□□□□ -0.92
CLSPN-202ENST00000318121 SNAPC4Q5SXM2 1469 aa9.29□□□□□ -0.92
CLSPN-202ENST00000318121 PBRM1Q86U86 1689 aa9.28□□□□□ -0.92
CLSPN-202ENST00000318121 LOC105371045A0A1W2PR82 267 aa9.28□□□□□ -0.92
CLSPN-202ENST00000318121 SYNJ2O15056 1496 aa9.27□□□□□ -0.93
CLSPN-202ENST00000318121 TNIKQ9UKE5 1360 aa9.26□□□□□ -0.93
CLSPN-202ENST00000318121 ADAMTS12P58397 1594 aa9.25□□□□□ -0.93
CLSPN-202ENST00000318121 GRIN2AQ12879 1464 aa9.22□□□□□ -0.93
CLSPN-202ENST00000318121 RANGAP1P46060 587 aaPredicted RBP9.2□□□□□ -0.94
CLSPN-202ENST00000318121 OSCARQ8IYS5 282 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms