RNA–Protein interactions for RNA: ENST00000317869.6

HNRNPCL1-201, Transcript of heterogeneous nuclear ribonucleoprotein C-like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNRNPCL1, Length 1,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL1-201ENST00000317869 NISCHQ9Y2I1 1504 aa25.93■■□□□ 1.74
HNRNPCL1-201ENST00000317869 CCDC180Q9P1Z9 1646 aa22.93■■□□□ 1.26
HNRNPCL1-201ENST00000317869 AEBP2Q6ZN18 517 aaPredicted RBP22.62■■□□□ 1.21
HNRNPCL1-201ENST00000317869 ABCC9O60706 1549 aa22.11■■□□□ 1.13
HNRNPCL1-201ENST00000317869 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.05
HNRNPCL1-201ENST00000317869 DCAF8L2P0C7V8 631 aa21.59■■□□□ 1.05
HNRNPCL1-201ENST00000317869 NACADO15069 1562 aa21.53■■□□□ 1.04
HNRNPCL1-201ENST00000317869 MYO15BQ96JP2 1530 aa21.52■■□□□ 1.04
HNRNPCL1-201ENST00000317869 DCAF1Q9Y4B6 1507 aa21.51■■□□□ 1.03
HNRNPCL1-201ENST00000317869 CHIC1Q5VXU3 224 aa21.51■■□□□ 1.03
HNRNPCL1-201ENST00000317869 RB1CC1Q8TDY2 1594 aa21.46■■□□□ 1.03
HNRNPCL1-201ENST00000317869 SCRIBQ14160 1630 aa20.86■□□□□ 0.93
HNRNPCL1-201ENST00000317869 UNC13AQ9UPW8 1703 aa20.84■□□□□ 0.93
HNRNPCL1-201ENST00000317869 PABPN1Q86U42 306 aaKnown RBP eCLIP20.72■□□□□ 0.91
HNRNPCL1-201ENST00000317869 BICRAQ9NZM4 1560 aa20.7■□□□□ 0.9
HNRNPCL1-201ENST00000317869 SHROOM4Q9ULL8 1493 aa20.67■□□□□ 0.9
HNRNPCL1-201ENST00000317869 EIF4G1Q04637 1599 aaKnown RBP20.17■□□□□ 0.82
HNRNPCL1-201ENST00000317869 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
HNRNPCL1-201ENST00000317869 BAZ1AQ9NRL2 1556 aaPredicted RBP20.1■□□□□ 0.81
HNRNPCL1-201ENST00000317869 SMARCA4P51532 1647 aa20.02■□□□□ 0.8
HNRNPCL1-201ENST00000317869 CC2D2AQ9P2K1 1620 aa20.01■□□□□ 0.79
HNRNPCL1-201ENST00000317869 DNAJC5BQ9UF47 199 aa19.99■□□□□ 0.79
HNRNPCL1-201ENST00000317869 MROH2BQ7Z745 1585 aa19.93■□□□□ 0.78
HNRNPCL1-201ENST00000317869 SMARCA2P51531 1590 aa19.91■□□□□ 0.78
HNRNPCL1-201ENST00000317869 ATAD2BQ9ULI0 1458 aa19.87■□□□□ 0.77
HNRNPCL1-201ENST00000317869 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
HNRNPCL1-201ENST00000317869 NCAPD3P42695 1498 aa19.86■□□□□ 0.77
HNRNPCL1-201ENST00000317869 RSF1Q96T23 1441 aaPredicted RBP19.85■□□□□ 0.77
HNRNPCL1-201ENST00000317869 HMGXB3Q12766 1538 aa19.76■□□□□ 0.75
HNRNPCL1-201ENST00000317869 BAZ1BQ9UIG0 1483 aaKnown RBP19.74■□□□□ 0.75
HNRNPCL1-201ENST00000317869 WIZO95785 1651 aa19.71■□□□□ 0.75
HNRNPCL1-201ENST00000317869 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
HNRNPCL1-201ENST00000317869 TOP2AP11388 1531 aaKnown RBP19.58■□□□□ 0.73
HNRNPCL1-201ENST00000317869 CCDC88BA6NC98 1476 aa19.35■□□□□ 0.69
HNRNPCL1-201ENST00000317869 CADPSQ9ULU8 1353 aa19.31■□□□□ 0.68
HNRNPCL1-201ENST00000317869 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.68
HNRNPCL1-201ENST00000317869 CFTRP13569 1480 aa19.22■□□□□ 0.67
HNRNPCL1-201ENST00000317869 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
HNRNPCL1-201ENST00000317869 NESP48681 1621 aa19.18■□□□□ 0.66
HNRNPCL1-201ENST00000317869 ERCC6Q03468 1493 aa19.09■□□□□ 0.65
HNRNPCL1-201ENST00000317869 SENP3Q9H4L4 574 aaPredicted RBP19.05■□□□□ 0.64
HNRNPCL1-201ENST00000317869 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
HNRNPCL1-201ENST00000317869 FANCD2Q9BXW9 1451 aa19.04■□□□□ 0.64
HNRNPCL1-201ENST00000317869 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
HNRNPCL1-201ENST00000317869 PHF23Q9BUL5 403 aaPredicted RBP18.99■□□□□ 0.63
HNRNPCL1-201ENST00000317869 KIF21AQ7Z4S6 1674 aa18.95■□□□□ 0.62
HNRNPCL1-201ENST00000317869 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
HNRNPCL1-201ENST00000317869 ABCC8Q09428 1581 aa18.89■□□□□ 0.61
HNRNPCL1-201ENST00000317869 THOC2Q8NI27 1593 aaKnown RBP18.83■□□□□ 0.6
HNRNPCL1-201ENST00000317869 WDR62O43379 1518 aa18.81■□□□□ 0.6
HNRNPCL1-201ENST00000317869 CUX2O14529 1486 aa18.81■□□□□ 0.6
HNRNPCL1-201ENST00000317869 URB2Q14146 1524 aaKnown RBP18.79■□□□□ 0.6
HNRNPCL1-201ENST00000317869 DNMBPQ6XZF7 1577 aa18.76■□□□□ 0.59
HNRNPCL1-201ENST00000317869 TOPBP1Q92547 1522 aa18.75■□□□□ 0.59
HNRNPCL1-201ENST00000317869 WRNQ14191 1432 aaPredicted RBP eCLIP18.74■□□□□ 0.59
HNRNPCL1-201ENST00000317869 CUX1P39880 1505 aa18.69■□□□□ 0.58
HNRNPCL1-201ENST00000317869 TOP2BQ02880 1626 aa18.64■□□□□ 0.57
HNRNPCL1-201ENST00000317869 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
HNRNPCL1-201ENST00000317869 BIVM-ERCC5R4GMW8 1640 aa18.62■□□□□ 0.57
HNRNPCL1-201ENST00000317869 POLA1P09884 1462 aaPredicted RBP18.61■□□□□ 0.57
HNRNPCL1-201ENST00000317869 FGD5Q6ZNL6 1462 aa18.6■□□□□ 0.57
HNRNPCL1-201ENST00000317869 SOGA1O94964 1423 aa18.59■□□□□ 0.57
HNRNPCL1-201ENST00000317869 SYNJ1O43426 1573 aa18.59■□□□□ 0.57
HNRNPCL1-201ENST00000317869 TRIM41Q8WV44 630 aa18.56■□□□□ 0.56
HNRNPCL1-201ENST00000317869 TARBP1Q13395 1621 aaKnown RBP18.5■□□□□ 0.55
HNRNPCL1-201ENST00000317869 RAD54L2Q9Y4B4 1467 aa18.5■□□□□ 0.55
HNRNPCL1-201ENST00000317869 ABCA10Q8WWZ4 1543 aa18.48■□□□□ 0.55
HNRNPCL1-201ENST00000317869 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
HNRNPCL1-201ENST00000317869 TDRD9Q8NDG6 1382 aaKnown RBP18.41■□□□□ 0.54
HNRNPCL1-201ENST00000317869 ZNF608Q9ULD9 1512 aaPredicted RBP18.4■□□□□ 0.54
HNRNPCL1-201ENST00000317869 AQRO60306 1485 aaKnown RBP eCLIP18.38■□□□□ 0.53
HNRNPCL1-201ENST00000317869 KIF27Q86VH2 1401 aa18.37■□□□□ 0.53
HNRNPCL1-201ENST00000317869 GAPVD1Q14C86 1478 aa18.37■□□□□ 0.53
HNRNPCL1-201ENST00000317869 EIF4G3O43432 1585 aaKnown RBP18.35■□□□□ 0.53
HNRNPCL1-201ENST00000317869 GRIN2BQ13224 1484 aa18.34■□□□□ 0.53
HNRNPCL1-201ENST00000317869 ABCA5Q8WWZ7 1642 aa18.31■□□□□ 0.52
HNRNPCL1-201ENST00000317869 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
HNRNPCL1-201ENST00000317869 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
HNRNPCL1-201ENST00000317869 EEA1Q15075 1411 aa18.25■□□□□ 0.51
HNRNPCL1-201ENST00000317869 PBRM1Q86U86 1689 aa18.23■□□□□ 0.51
HNRNPCL1-201ENST00000317869 IGF1RP08069 1367 aa18.22■□□□□ 0.51
HNRNPCL1-201ENST00000317869 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
HNRNPCL1-201ENST00000317869 CHMP7Q8WUX9 453 aaPredicted RBP18.21■□□□□ 0.51
HNRNPCL1-201ENST00000317869 FHAD1B1AJZ9 1412 aa18.19■□□□□ 0.5
HNRNPCL1-201ENST00000317869 SYNJ2O15056 1496 aa18.18■□□□□ 0.5
HNRNPCL1-201ENST00000317869 FBLN2P98095 1184 aa18.17■□□□□ 0.5
HNRNPCL1-201ENST00000317869 CSRNP3Q8WYN3 585 aa18.17■□□□□ 0.5
HNRNPCL1-201ENST00000317869 RUSC2Q8N2Y8 1516 aa18.15■□□□□ 0.5
HNRNPCL1-201ENST00000317869 CUL7Q14999 1698 aa18.15■□□□□ 0.5
HNRNPCL1-201ENST00000317869 CARMIL1Q5VZK9 1371 aa18.15■□□□□ 0.5
HNRNPCL1-201ENST00000317869 OSCARQ8IYS5 282 aa18.14■□□□□ 0.49
HNRNPCL1-201ENST00000317869 ADAMTS12P58397 1594 aa18.12■□□□□ 0.49
HNRNPCL1-201ENST00000317869 FAM9AQ8IZU1 332 aaPredicted RBP18.08■□□□□ 0.48
HNRNPCL1-201ENST00000317869 GRIN2AQ12879 1464 aa18.07■□□□□ 0.48
HNRNPCL1-201ENST00000317869 RAPGEF2Q9Y4G8 1499 aa18.06■□□□□ 0.48
HNRNPCL1-201ENST00000317869 CHD1O14646 1710 aa18.05■□□□□ 0.48
HNRNPCL1-201ENST00000317869 PRXQ9BXM0 1461 aa18.04■□□□□ 0.48
HNRNPCL1-201ENST00000317869 NUP160Q12769 1436 aa17.98■□□□□ 0.47
HNRNPCL1-201ENST00000317869 KIF21BO75037 1637 aa17.94■□□□□ 0.46
HNRNPCL1-201ENST00000317869 KIAA0586Q9BVV6 1533 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms