RNA–Protein interactions for RNA: ENST00000317419.7

RABGAP1-201, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 2,186 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-201ENST00000317419 NISCHQ9Y2I1 1504 aa44.95■■■■■ 4.79
RABGAP1-201ENST00000317419 CCDC180Q9P1Z9 1646 aa39.68■■■■□ 3.94
RABGAP1-201ENST00000317419 ABCC9O60706 1549 aa38.07■■■■□ 3.69
RABGAP1-201ENST00000317419 ZCCHC6Q5VYS8 1495 aaKnown RBP37.6■■■■□ 3.61
RABGAP1-201ENST00000317419 DCAF1Q9Y4B6 1507 aa37.29■■■■□ 3.56
RABGAP1-201ENST00000317419 MYO15BQ96JP2 1530 aa37.21■■■■□ 3.55
RABGAP1-201ENST00000317419 NACADO15069 1562 aa37.13■■■■□ 3.53
RABGAP1-201ENST00000317419 DCAF8L2P0C7V8 631 aa37.07■■■■□ 3.52
RABGAP1-201ENST00000317419 RB1CC1Q8TDY2 1594 aa36.97■■■■□ 3.51
RABGAP1-201ENST00000317419 SCRIBQ14160 1630 aa36.17■■■■□ 3.38
RABGAP1-201ENST00000317419 UNC13AQ9UPW8 1703 aa36.16■■■■□ 3.38
RABGAP1-201ENST00000317419 BICRAQ9NZM4 1560 aa35.9■■■■□ 3.34
RABGAP1-201ENST00000317419 SHROOM4Q9ULL8 1493 aa35.76■■■■□ 3.32
RABGAP1-201ENST00000317419 PABPN1Q86U42 306 aaKnown RBP eCLIP35.67■■■■□ 3.3
RABGAP1-201ENST00000317419 CECR2Q9BXF3 1484 aa34.92■■■■□ 3.18
RABGAP1-201ENST00000317419 EIF4G1Q04637 1599 aaKnown RBP34.85■■■■□ 3.17
RABGAP1-201ENST00000317419 BAZ1AQ9NRL2 1556 aaPredicted RBP34.77■■■■□ 3.16
RABGAP1-201ENST00000317419 SMARCA4P51532 1647 aa34.72■■■■□ 3.15
RABGAP1-201ENST00000317419 MROH2BQ7Z745 1585 aa34.64■■■■□ 3.14
RABGAP1-201ENST00000317419 CC2D2AQ9P2K1 1620 aa34.52■■■■□ 3.12
RABGAP1-201ENST00000317419 RSF1Q96T23 1441 aaPredicted RBP34.5■■■■□ 3.11
RABGAP1-201ENST00000317419 PEG3Q9GZU2 1588 aa34.44■■■■□ 3.1
RABGAP1-201ENST00000317419 DNAJC5BQ9UF47 199 aa34.39■■■■□ 3.1
RABGAP1-201ENST00000317419 ATAD2BQ9ULI0 1458 aa34.37■■■■□ 3.09
RABGAP1-201ENST00000317419 SMARCA2P51531 1590 aa34.34■■■■□ 3.09
RABGAP1-201ENST00000317419 NCAPD3P42695 1498 aa34.28■■■■□ 3.08
RABGAP1-201ENST00000317419 WIZO95785 1651 aa34.27■■■■□ 3.08
RABGAP1-201ENST00000317419 HMGXB3Q12766 1538 aa34.16■■■■□ 3.06
RABGAP1-201ENST00000317419 BAZ1BQ9UIG0 1483 aaKnown RBP34.07■■■■□ 3.04
RABGAP1-201ENST00000317419 TOP2AP11388 1531 aaKnown RBP33.98■■■■□ 3.03
RABGAP1-201ENST00000317419 SUPT5HO00267 1087 aaKnown RBP33.96■■■■□ 3.03
RABGAP1-201ENST00000317419 CCDC88BA6NC98 1476 aa33.57■■■□□ 2.96
RABGAP1-201ENST00000317419 CADPSQ9ULU8 1353 aa33.28■■■□□ 2.92
RABGAP1-201ENST00000317419 CFTRP13569 1480 aa33.25■■■□□ 2.91
RABGAP1-201ENST00000317419 LAMC3Q9Y6N6 1575 aa33.23■■■□□ 2.91
RABGAP1-201ENST00000317419 NESP48681 1621 aa33.18■■■□□ 2.9
RABGAP1-201ENST00000317419 PRDM2Q13029 1718 aa33.02■■■□□ 2.88
RABGAP1-201ENST00000317419 PDS5BQ9NTI5 1447 aa32.95■■■□□ 2.87
RABGAP1-201ENST00000317419 FANCD2Q9BXW9 1451 aa32.87■■■□□ 2.85
RABGAP1-201ENST00000317419 KIF21AQ7Z4S6 1674 aa32.81■■■□□ 2.84
RABGAP1-201ENST00000317419 CEP164Q9UPV0 1460 aa32.75■■■□□ 2.83
RABGAP1-201ENST00000317419 ERCC6Q03468 1493 aa32.73■■■□□ 2.83
RABGAP1-201ENST00000317419 MRC2Q9UBG0 1479 aa32.59■■■□□ 2.81
RABGAP1-201ENST00000317419 THOC2Q8NI27 1593 aaKnown RBP32.58■■■□□ 2.81
RABGAP1-201ENST00000317419 URB2Q14146 1524 aaKnown RBP32.53■■■□□ 2.8
RABGAP1-201ENST00000317419 ABCC8Q09428 1581 aa32.5■■■□□ 2.79
RABGAP1-201ENST00000317419 WDR62O43379 1518 aa32.49■■■□□ 2.79
RABGAP1-201ENST00000317419 DNMBPQ6XZF7 1577 aa32.47■■■□□ 2.79
RABGAP1-201ENST00000317419 WRNQ14191 1432 aaPredicted RBP eCLIP32.47■■■□□ 2.79
RABGAP1-201ENST00000317419 CUX1P39880 1505 aa32.46■■■□□ 2.79
RABGAP1-201ENST00000317419 TOPBP1Q92547 1522 aa32.44■■■□□ 2.78
RABGAP1-201ENST00000317419 SYNJ1O43426 1573 aa32.37■■■□□ 2.77
RABGAP1-201ENST00000317419 BIVM-ERCC5R4GMW8 1640 aa32.37■■■□□ 2.77
RABGAP1-201ENST00000317419 TOP2BQ02880 1626 aa32.36■■■□□ 2.77
RABGAP1-201ENST00000317419 CUX2O14529 1486 aa32.24■■■□□ 2.75
RABGAP1-201ENST00000317419 FGD5Q6ZNL6 1462 aa32.21■■■□□ 2.75
RABGAP1-201ENST00000317419 POLA1P09884 1462 aaPredicted RBP32.21■■■□□ 2.75
RABGAP1-201ENST00000317419 CHIC1Q5VXU3 224 aa32.21■■■□□ 2.75
RABGAP1-201ENST00000317419 TRIM41Q8WV44 630 aa32.09■■■□□ 2.73
RABGAP1-201ENST00000317419 IFT140Q96RY7 1462 aa32.07■■■□□ 2.72
RABGAP1-201ENST00000317419 TARBP1Q13395 1621 aaKnown RBP32.07■■■□□ 2.72
RABGAP1-201ENST00000317419 SOGA1O94964 1423 aa32.06■■■□□ 2.72
RABGAP1-201ENST00000317419 RAD54L2Q9Y4B4 1467 aa32.03■■■□□ 2.72
RABGAP1-201ENST00000317419 ABCA10Q8WWZ4 1543 aa31.97■■■□□ 2.71
RABGAP1-201ENST00000317419 WDR97A6NE52 1622 aa31.97■■■□□ 2.71
RABGAP1-201ENST00000317419 ZNF608Q9ULD9 1512 aaPredicted RBP31.85■■■□□ 2.69
RABGAP1-201ENST00000317419 ABCA5Q8WWZ7 1642 aa31.79■■■□□ 2.68
RABGAP1-201ENST00000317419 TDRD9Q8NDG6 1382 aaKnown RBP31.78■■■□□ 2.68
RABGAP1-201ENST00000317419 EIF4G3O43432 1585 aaKnown RBP31.75■■■□□ 2.67
RABGAP1-201ENST00000317419 AQRO60306 1485 aaKnown RBP eCLIP31.74■■■□□ 2.676e-6■■■■□ 23.2
RABGAP1-201ENST00000317419 KIF27Q86VH2 1401 aa31.73■■■□□ 2.67
RABGAP1-201ENST00000317419 GAPVD1Q14C86 1478 aa31.71■■■□□ 2.67
RABGAP1-201ENST00000317419 RUSC2Q8N2Y8 1516 aa31.67■■■□□ 2.66
RABGAP1-201ENST00000317419 GRIN2BQ13224 1484 aa31.62■■■□□ 2.65
RABGAP1-201ENST00000317419 EEA1Q15075 1411 aa31.61■■■□□ 2.65
RABGAP1-201ENST00000317419 PBRM1Q86U86 1689 aa31.6■■■□□ 2.65
RABGAP1-201ENST00000317419 ERICH3Q5RHP9 1530 aa31.6■■■□□ 2.65
RABGAP1-201ENST00000317419 IGF1RP08069 1367 aa31.56■■■□□ 2.64
RABGAP1-201ENST00000317419 MAGI1Q96QZ7 1491 aaPredicted RBP31.48■■■□□ 2.63
RABGAP1-201ENST00000317419 SNAPC4Q5SXM2 1469 aa31.47■■■□□ 2.63
RABGAP1-201ENST00000317419 CSRNP3Q8WYN3 585 aa31.42■■■□□ 2.62
RABGAP1-201ENST00000317419 ADAMTS12P58397 1594 aa31.42■■■□□ 2.62
RABGAP1-201ENST00000317419 CUL7Q14999 1698 aa31.42■■■□□ 2.62
RABGAP1-201ENST00000317419 FHAD1B1AJZ9 1412 aa31.39■■■□□ 2.61
RABGAP1-201ENST00000317419 PRXQ9BXM0 1461 aa31.36■■■□□ 2.61
RABGAP1-201ENST00000317419 FAM9AQ8IZU1 332 aaPredicted RBP31.35■■■□□ 2.61
RABGAP1-201ENST00000317419 CARMIL1Q5VZK9 1371 aa31.35■■■□□ 2.61
RABGAP1-201ENST00000317419 SYNJ2O15056 1496 aa31.35■■■□□ 2.61
RABGAP1-201ENST00000317419 RAPGEF2Q9Y4G8 1499 aa31.24■■■□□ 2.59
RABGAP1-201ENST00000317419 KIF21BO75037 1637 aa31.23■■■□□ 2.59
RABGAP1-201ENST00000317419 GRIN2AQ12879 1464 aa31.22■■■□□ 2.59
RABGAP1-201ENST00000317419 CHD1O14646 1710 aa31.21■■■□□ 2.59
RABGAP1-201ENST00000317419 CHMP7Q8WUX9 453 aaPredicted RBP31.19■■■□□ 2.58
RABGAP1-201ENST00000317419 FBLN2P98095 1184 aa31.11■■■□□ 2.57
RABGAP1-201ENST00000317419 NUP160Q12769 1436 aa31.1■■■□□ 2.57
RABGAP1-201ENST00000317419 GOLGA3Q08378 1498 aa31.06■■■□□ 2.56
RABGAP1-201ENST00000317419 CEP170Q5SW79 1584 aa31.05■■■□□ 2.56
RABGAP1-201ENST00000317419 OSCARQ8IYS5 282 aa30.96■■■□□ 2.55
RABGAP1-201ENST00000317419 CLASP1Q7Z460 1538 aa30.96■■■□□ 2.55
RABGAP1-201ENST00000317419 KIAA0586Q9BVV6 1533 aa30.94■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms